FFCP PHASE1:Hg19::chr11:14993888..14993903,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1437 | |||
|TSSclassifier=strong | |||
|UniProt=P01258 | |||
|association_with_transcript=0bp_to_ENST00000331587_5end | |||
|cluster_id=chr11:14993888..14993903,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_1_at_CALCA_5end | |||
|id=chr11:14993888..14993903,- | |||
|ontology_enrichment_celltype=CL:0000453!7.89e-08!5;CL:0002322!1.11e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.06e-21!115;UBERON:0003076!4.54e-13!15;UBERON:0003057!4.54e-13!15;UBERON:0004732!9.35e-13!13;UBERON:0004733!2.01e-11!12;UBERON:0002028!2.01e-11!12;UBERON:0007277!2.01e-11!12;UBERON:0002346!2.48e-10!90;UBERON:0002298!1.06e-09!8;UBERON:0003075!1.39e-09!86;UBERON:0007284!1.39e-09!86;UBERON:0001017!1.25e-08!82;UBERON:0005743!1.36e-08!86;UBERON:0000073!1.62e-08!94;UBERON:0001016!1.62e-08!94;UBERON:0001049!1.63e-08!57;UBERON:0005068!1.63e-08!57;UBERON:0006241!1.63e-08!57;UBERON:0007135!1.63e-08!57;UBERON:0002680!2.16e-07!9;UBERON:0001895!2.16e-07!9;UBERON:0010092!2.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.16e-17;6!UBERON:0004732;5.46e-15;13!UBERON:0001896;2.44e-13;3!UBERON:0005290;2.44e-13;3!UBERON:0004733;3.56e-12;12!UBERON:0002028;3.56e-12;12!UBERON:0001905;2.21e-10;2!UBERON:0002757;2.21e-10;2!UBERON:0010134;2.21e-10;2!UBERON:0005408;2.21e-10;2!UBERON:0001899;2.21e-10;2!UBERON:0002133;5.30e-10;2!UBERON:0003127;8.62e-10;2!UBERON:0002148;1.22e-09;2!UBERON:0006331;1.22e-09;2!UBERON:0009662;1.22e-09;2!UBERON:0002368;2.90e-08;33!UBERON:0003978;6.27e-07;3!UBERON:0000946;6.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,7.43e-18,6;UBERON:0003076,4.15e-17,15;UBERON:0003057,4.15e-17,15;UBERON:0004732,3.63e-15,13;UBERON:0001896,1.97e-13,3;UBERON:0005290,1.97e-13,3;UBERON:0010096,1.97e-13,3;UBERON:0004733,2.57e-12,12;UBERON:0002028,2.57e-12,12;UBERON:0007277,2.57e-12,12;UBERON:0007023,1.61e-10,114;UBERON:0001905,2.21e-10,2;UBERON:0002757,2.21e-10,2;UBERON:0010134,2.21e-10,2;UBERON:0005408,2.21e-10,2;UBERON:0001899,2.21e-10,2;UBERON:0002133,4.96e-10,2;UBERON:0003127,8.82e-10,2;UBERON:0002148,8.82e-10,2;UBERON:0006331,8.82e-10,2;UBERON:0009662,8.82e-10,2;UBERON:0002368,7.99e-09,35;UBERON:0011216,1.67e-07,223;UBERON:0003978,6.00e-07,3;UBERON:0009751,6.00e-07,3;UBERON:0000946,6.00e-07,3;UBERON:0002523,6.00e-07,3;UBERON:0005983,6.00e-07,3;UBERON:0002165,6.00e-07,3;UBERON:0002062,6.00e-07,3;UBERON:0007280,6.00e-07,3;UBERON:0000988,8.76e-07,3;UBERON:0002240,9.83e-07,3;UBERON:0005174,9.83e-07,3;UBERON:0001137,9.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.69716365721711,2.59152637538426,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,39.5829237476541,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.110579259931225,0,8.11725969469698,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0,0,0,0.213452994739353,0,0.144090417154106,0,209.517492389459,0,0,5.1852687615695,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,5.86493042671734,0.229160424011684,16.5110795652667,0.798716001995964,3.43380838509257,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,1.24632101408756,0.2249738915515,0.77380195455795,0,0,5.43759380364467,4.09145787452985,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,5.42243264608905,53.0027555648885,23.2709321450791,1.98348902614035,0,0,0.640724475406168,1.25763444079733,0.414239055347196,0,0,0,1.27668251554036,0.544017803369474,0,0.306345576763462,0,4.71162288750703,0,0.244052529803926,0,1.72022758707021,3.21694249456872,4.90561583236929,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53318401491205,0.930053882193542,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20130602011215,0,0,0.123935764259002,0,0,0,3540.12384891835,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.80682027481408,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0.548257766857182,0,1.40696995487696,0,130.175546118424,80.3718096102989,0.606965604236632,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,1.25588948560822,0,1.12108865325516,1.82631744101899,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0.218559560503957,5068.13918559177,0,6396.02581179103,1.96308467114945,0,10.566393189585,0,4.32326022707326,0.709036767709349,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0.509944148709909,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,19.0451545170992,0.322944549180031,0.372448285775147,0.672791175483681,28.4502797503397,105.303055447232,0,0,0,9.53905331722595,3.32660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@CALCA | |||
}} |
Latest revision as of 22:20, 16 September 2015
Short description: | p1@CALCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALCA_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 0bp_to_ENST00000331587_5end |
EntrezGene: | CALCA |
HGNC: | 1437 |
UniProt: | P01258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 7.43e-18 | 6 |
posterior neural tube | 4.15e-17 | 15 |
chordal neural plate | 4.15e-17 | 15 |
segmental subdivision of nervous system | 3.63e-15 | 13 |
medulla oblongata | 1.97e-13 | 3 |
myelencephalon | 1.97e-13 | 3 |
future myelencephalon | 1.97e-13 | 3 |
segmental subdivision of hindbrain | 2.57e-12 | 12 |
hindbrain | 2.57e-12 | 12 |
presumptive hindbrain | 2.57e-12 | 12 |
adult organism | 1.61e-10 | 114 |
pineal body | 2.21e-10 | 2 |
regional part of epithalamus | 2.21e-10 | 2 |
secretory circumventricular organ | 2.21e-10 | 2 |
circumventricular organ | 2.21e-10 | 2 |
epithalamus | 2.21e-10 | 2 |
atrioventricular valve | 4.96e-10 | 2 |
open tracheal system trachea | 8.82e-10 | 2 |
locus ceruleus | 8.82e-10 | 2 |
brainstem nucleus | 8.82e-10 | 2 |
hindbrain nucleus | 8.82e-10 | 2 |
endocrine gland | 7.99e-09 | 35 |
organ system subdivision | 1.67e-07 | 223 |
valve | 6.00e-07 | 3 |
cardiac mesenchyme | 6.00e-07 | 3 |
cardial valve | 6.00e-07 | 3 |
tunica intima | 6.00e-07 | 3 |
heart layer | 6.00e-07 | 3 |
endocardium | 6.00e-07 | 3 |
endocardial cushion | 6.00e-07 | 3 |
presumptive endocardium | 6.00e-07 | 3 |
pons | 8.76e-07 | 3 |
spinal cord | 9.83e-07 | 3 |
dorsal region element | 9.83e-07 | 3 |
dorsum | 9.83e-07 | 3 |