FFCP PHASE1:Hg19::chr2:30457307..30457343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81606 | |EntrezGene=81606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29532 | |HGNC=29532 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=175bp_to_ENST00000484150_5end | |association_with_transcript=175bp_to_ENST00000484150_5end | ||
|cluster_id=chr2:30457307..30457343,+ | |||
|description=CAGE_peak_8_at_LBH_5end | |description=CAGE_peak_8_at_LBH_5end | ||
|id=chr2:30457307..30457343,+ | |id=chr2:30457307..30457343,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.29e-15;13!CL:0002615;4.18e-13;3!CL:0002579;2.50e-12;3!CL:0002334;2.74e-11;12!CL:0002617;1.94e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.75e-13,3;CL:0000136,1.11e-12,15;CL:0002579,1.43e-12,3;CL:0002334,1.85e-11,12;CL:0002617,1.95e-09,2;CL:0000057,2.64e-09,76;CL:0000134,3.65e-09,354;CL:0002320,8.25e-09,361;CL:0000219,3.21e-08,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.93e-07;5!DOID:450;1.93e-07;5!DOID:66;1.93e-07;5!DOID:423;1.93e-07;5!DOID:0080000;1.93e-07;5!DOID:11722;1.93e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.76e-07,5;DOID:450,2.76e-07,5;DOID:66,2.76e-07,5;DOID:423,2.76e-07,5;DOID:0080000,2.76e-07,5;DOID:11722,2.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.66e-07!6;UBERON:0002358!7.66e-07!6;UBERON:0003684!7.66e-07!6;UBERON:0001178!7.66e-07!6 | |ontology_enrichment_uberon=UBERON:0003688!7.66e-07!6;UBERON:0002358!7.66e-07!6;UBERON:0003684!7.66e-07!6;UBERON:0001178!7.66e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.13e-23;6!UBERON:0002358;1.13e-23;6!UBERON:0003684;1.13e-23;6!UBERON:0001178;1.13e-23;6!UBERON:0004457;1.46e-15;9!UBERON:0000042;1.46e-15;9!UBERON:0005631;1.71e-09;10!UBERON:0000158;1.71e-09;10!UBERON:0005406;9.15e-09;2!UBERON:0000310;8.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.29e-24,6;UBERON:0002358,7.29e-24,6;UBERON:0003684,7.29e-24,6;UBERON:0001178,7.29e-24,6;UBERON:0004457,1.37e-11,12;UBERON:0000042,1.37e-11,12;UBERON:0002384,5.08e-09,371;UBERON:0005406,6.47e-09,2;UBERON:0004923,3.26e-07,66;UBERON:0000310,8.17e-07,10 | |||
|phase1_expression=3.45188920614058,4.28201047781966,2.11431606143957,6.00439790118782,2.23480547213644,2.61701557230111,5.06599756336621,0,0,0,0,0.436882744260345,1.05506791291381,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,1.77901850772711,0,1.20118796110804,0.574752439954483,1.98313461835459,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.651844533267181,0.946895611469467,0,0.334231370655521,0.589211814949674,0.443067789167242,0.541607727530031,0.384273959177026,0.650296737799391,0.657751618414705,0.829050053357545,0.869409257205157,0.593146252648242,0.267540828089713,1.04535523804977,0.793165398882963,0.383220493601921,1.03088233644789,0.253019692019503,1.27426165729639,0.651083453856419,2.85135613334512,0,0.639933055772092,0,0.236777252044017,0,0.201606743224732,1.06976078313403,0.724122019413995,0,0,0.255725123687061,0.361439152384566,2.00535164254356,1.01392563272577,1.5905718941022,0.973269740605272,0.0945348171640679,0.443458794925128,0.43917392846563,0.130979075497713,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,0,0,1.12135520028461,0,1.2333377420858,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0.358779271377724,2.13557388818567,1.05965950579781,0,1.13357782162283,0.257640540045629,2.41951913231067,0.168776332241266,0.487185025805993,0,1.93304787148829,0.161646056818812,0.710019185033229,1.20902517873168,0.508681776931463,0,0,0,0.487894824518382,0,0.580969714347592,0.10366105501537,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0.528290604079356,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59562869950922,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0,1.20378439891088,0,0,0,0.184369168541703,0.0868836144680828,0,0.686286847621712,0.413536052245775,0.215714200818617,0.213455115606889,0.606255142892519,0,0,2.23297027036899,0.767309866440312,4.49056151092918,1.66580894032411,5.11707249066703,1.44768529029247,1.48418066444991,0,0,0.164254312027618,0,0,0.846016147141356,0,0,0,0.182091168006717,1.04899531967539,0.451199612907412,0.308061348417659,0.784349769176855,0,0,0,0,0,3.08454505380579,0.270946437543853,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0,0.719489830333259,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0.818999468447914,0.565621727814851,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0.844430541190656,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0.648473311192717,0.540031437238115,0,0,0,0,0.371606350251437,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0.422250816255987,0.796991953004279,0.276283915531148,0,0.20453736500431,0.246169610922139,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.874813840149763,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,2.1983422416447,1.06606955203727,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.694238953340524,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0.798716001995964,2.14613024068285,0.669514372325618,0.470284307407084,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,1.728442982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| ||
|short_description=p8@LBH | |short_description=p8@LBH | ||
}} | }} |
Latest revision as of 21:56, 16 September 2015
Short description: | p8@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LBH_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000484150_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.75e-13 | 3 |
fat cell | 1.11e-12 | 15 |
omentum preadipocyte | 1.43e-12 | 3 |
preadipocyte | 1.85e-11 | 12 |
adipocyte of breast | 1.95e-09 | 2 |
fibroblast | 2.64e-09 | 76 |
mesenchymal cell | 3.65e-09 | 354 |
connective tissue cell | 8.25e-09 | 361 |
motile cell | 3.21e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.29e-24 | 6 |
peritoneum | 7.29e-24 | 6 |
abdominal cavity | 7.29e-24 | 6 |
visceral peritoneum | 7.29e-24 | 6 |
cavity lining | 1.37e-11 | 12 |
serous membrane | 1.37e-11 | 12 |
connective tissue | 5.08e-09 | 371 |
perirenal fat | 6.47e-09 | 2 |
organ component layer | 3.26e-07 | 66 |
breast | 8.17e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.76e-07 | 5 |
myotonic disease | 2.76e-07 | 5 |
muscle tissue disease | 2.76e-07 | 5 |
myopathy | 2.76e-07 | 5 |
muscular disease | 2.76e-07 | 5 |
myotonic dystrophy | 2.76e-07 | 5 |