FFCP PHASE1:Hg19::chr17:64960832..64960852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27092 | |EntrezGene=27092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1408 | |HGNC=1408 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBN1 | |UniProt=Q9UBN1 | ||
|association_with_transcript=-127bp_to_NM_014405_5end | |association_with_transcript=-127bp_to_NM_014405_5end | ||
|cluster_id=chr17:64960832..64960852,+ | |||
|coexpression_cluster_id=C3666 | |coexpression_cluster_id=C3666 | ||
|description=CAGE_peak_3_at_CACNG4_5end | |description=CAGE_peak_3_at_CACNG4_5end | ||
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|ontology_enrichment_celltype=CL:0002319!2.64e-09!25 | |ontology_enrichment_celltype=CL:0002319!2.64e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.10e-10;25!CL:0000128;7.47e-09;7!CL:0000126;7.47e-09;7!CL:0000127;7.47e-09;7 | |ontology_enrichment_celltype_v019=CL:0002319;8.10e-10;25!CL:0000128;7.47e-09;7!CL:0000126;7.47e-09;7!CL:0000127;7.47e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.44e-10,25;CL:0000128,7.95e-09,7;CL:0000126,7.95e-09,7;CL:0000127,7.95e-09,7;CL:0002453,7.95e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.40e-11;82 | ||
|ontology_enrichment_disease=DOID:0050687!6.07e-11!143;DOID:305!2.00e-10!106 | |ontology_enrichment_disease=DOID:0050687!6.07e-11!143;DOID:305!2.00e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.76e-08;4!DOID:1612;3.76e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;3.76e-08;4!DOID:1612;3.76e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,3.26e-08,4;DOID:1612,3.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.00e-40!82;UBERON:0005743!1.67e-39!86;UBERON:0000073!1.81e-39!94;UBERON:0001016!1.81e-39!94;UBERON:0001049!2.29e-35!57;UBERON:0005068!2.29e-35!57;UBERON:0006241!2.29e-35!57;UBERON:0007135!2.29e-35!57;UBERON:0000955!4.07e-32!69;UBERON:0006238!4.07e-32!69;UBERON:0001893!6.82e-31!34;UBERON:0002020!9.87e-31!34;UBERON:0003528!9.87e-31!34;UBERON:0002780!2.50e-30!41;UBERON:0001890!2.50e-30!41;UBERON:0006240!2.50e-30!41;UBERON:0002791!4.45e-30!33;UBERON:0001869!2.63e-29!32;UBERON:0003080!3.18e-29!42;UBERON:0002616!1.55e-28!59;UBERON:0003075!3.66e-26!86;UBERON:0007284!3.66e-26!86;UBERON:0002346!8.25e-25!90;UBERON:0000956!9.43e-23!25;UBERON:0000203!9.43e-23!25;UBERON:0003056!1.20e-22!61;UBERON:0004121!5.98e-22!169;UBERON:0000924!2.55e-21!173;UBERON:0006601!2.55e-21!173;UBERON:0002619!6.41e-20!22;UBERON:0001950!3.60e-18!20;UBERON:0000033!5.01e-18!123;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0007023!1.75e-14!115;UBERON:0000064!1.67e-11!219;UBERON:0002420!1.86e-09!9;UBERON:0007245!1.86e-09!9;UBERON:0010009!1.86e-09!9;UBERON:0010011!1.86e-09!9;UBERON:0000454!1.86e-09!9;UBERON:0002308!2.24e-09!9;UBERON:0000125!2.24e-09!9;UBERON:0000475!6.96e-09!365;UBERON:0000025!2.57e-08!194;UBERON:0009663!7.50e-08!7;UBERON:0001871!1.39e-07!7;UBERON:0003076!1.72e-07!15;UBERON:0003057!1.72e-07!15;UBERON:0000483!9.62e-07!309;UBERON:0000062!9.97e-07!511;UBERON:0000119!9.98e-07!312 | |ontology_enrichment_uberon=UBERON:0001017!3.00e-40!82;UBERON:0005743!1.67e-39!86;UBERON:0000073!1.81e-39!94;UBERON:0001016!1.81e-39!94;UBERON:0001049!2.29e-35!57;UBERON:0005068!2.29e-35!57;UBERON:0006241!2.29e-35!57;UBERON:0007135!2.29e-35!57;UBERON:0000955!4.07e-32!69;UBERON:0006238!4.07e-32!69;UBERON:0001893!6.82e-31!34;UBERON:0002020!9.87e-31!34;UBERON:0003528!9.87e-31!34;UBERON:0002780!2.50e-30!41;UBERON:0001890!2.50e-30!41;UBERON:0006240!2.50e-30!41;UBERON:0002791!4.45e-30!33;UBERON:0001869!2.63e-29!32;UBERON:0003080!3.18e-29!42;UBERON:0002616!1.55e-28!59;UBERON:0003075!3.66e-26!86;UBERON:0007284!3.66e-26!86;UBERON:0002346!8.25e-25!90;UBERON:0000956!9.43e-23!25;UBERON:0000203!9.43e-23!25;UBERON:0003056!1.20e-22!61;UBERON:0004121!5.98e-22!169;UBERON:0000924!2.55e-21!173;UBERON:0006601!2.55e-21!173;UBERON:0002619!6.41e-20!22;UBERON:0001950!3.60e-18!20;UBERON:0000033!5.01e-18!123;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0007023!1.75e-14!115;UBERON:0000064!1.67e-11!219;UBERON:0002420!1.86e-09!9;UBERON:0007245!1.86e-09!9;UBERON:0010009!1.86e-09!9;UBERON:0010011!1.86e-09!9;UBERON:0000454!1.86e-09!9;UBERON:0002308!2.24e-09!9;UBERON:0000125!2.24e-09!9;UBERON:0000475!6.96e-09!365;UBERON:0000025!2.57e-08!194;UBERON:0009663!7.50e-08!7;UBERON:0001871!1.39e-07!7;UBERON:0003076!1.72e-07!15;UBERON:0003057!1.72e-07!15;UBERON:0000483!9.62e-07!309;UBERON:0000062!9.97e-07!511;UBERON:0000119!9.98e-07!312 | ||
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| ||
|short_description=p3@CACNG4 | |short_description=p3@CACNG4 | ||
}} | }} |
Latest revision as of 21:36, 16 September 2015
Short description: | p3@CACNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNG4_5end |
Coexpression cluster: | C3666_MCF7_breast_Neural_brain_duodenum_temporal_parietal |
Association with transcript: | -127bp_to_NM_014405_5end |
EntrezGene: | CACNG4 |
HGNC: | 1408 |
UniProt: | Q9UBN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.44e-10 | 25 |
oligodendrocyte | 7.95e-09 | 7 |
macroglial cell | 7.95e-09 | 7 |
astrocyte | 7.95e-09 | 7 |
oligodendrocyte precursor cell | 7.95e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.26e-08 | 4 |
breast cancer | 3.26e-08 | 4 |