FFCP PHASE1:Hg19::chr17:64960832..64960852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27092 | |EntrezGene=27092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1408 | |HGNC=1408 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBN1 | |UniProt=Q9UBN1 | ||
|association_with_transcript=-127bp_to_NM_014405_5end | |association_with_transcript=-127bp_to_NM_014405_5end | ||
|cluster_id=chr17:64960832..64960852,+ | |||
|coexpression_cluster_id=C3666 | |||
|description=CAGE_peak_3_at_CACNG4_5end | |description=CAGE_peak_3_at_CACNG4_5end | ||
|id=chr17:64960832..64960852,+ | |id=chr17:64960832..64960852,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.64e-09!25 | |ontology_enrichment_celltype=CL:0002319!2.64e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;8.10e-10;25!CL:0000128;7.47e-09;7!CL:0000126;7.47e-09;7!CL:0000127;7.47e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.44e-10,25;CL:0000128,7.95e-09,7;CL:0000126,7.95e-09,7;CL:0000127,7.95e-09,7;CL:0002453,7.95e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-11;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.07e-11!143;DOID:305!2.00e-10!106 | |ontology_enrichment_disease=DOID:0050687!6.07e-11!143;DOID:305!2.00e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.76e-08;4!DOID:1612;3.76e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.26e-08,4;DOID:1612,3.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.00e-40!82;UBERON:0005743!1.67e-39!86;UBERON:0000073!1.81e-39!94;UBERON:0001016!1.81e-39!94;UBERON:0001049!2.29e-35!57;UBERON:0005068!2.29e-35!57;UBERON:0006241!2.29e-35!57;UBERON:0007135!2.29e-35!57;UBERON:0000955!4.07e-32!69;UBERON:0006238!4.07e-32!69;UBERON:0001893!6.82e-31!34;UBERON:0002020!9.87e-31!34;UBERON:0003528!9.87e-31!34;UBERON:0002780!2.50e-30!41;UBERON:0001890!2.50e-30!41;UBERON:0006240!2.50e-30!41;UBERON:0002791!4.45e-30!33;UBERON:0001869!2.63e-29!32;UBERON:0003080!3.18e-29!42;UBERON:0002616!1.55e-28!59;UBERON:0003075!3.66e-26!86;UBERON:0007284!3.66e-26!86;UBERON:0002346!8.25e-25!90;UBERON:0000956!9.43e-23!25;UBERON:0000203!9.43e-23!25;UBERON:0003056!1.20e-22!61;UBERON:0004121!5.98e-22!169;UBERON:0000924!2.55e-21!173;UBERON:0006601!2.55e-21!173;UBERON:0002619!6.41e-20!22;UBERON:0001950!3.60e-18!20;UBERON:0000033!5.01e-18!123;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0007023!1.75e-14!115;UBERON:0000064!1.67e-11!219;UBERON:0002420!1.86e-09!9;UBERON:0007245!1.86e-09!9;UBERON:0010009!1.86e-09!9;UBERON:0010011!1.86e-09!9;UBERON:0000454!1.86e-09!9;UBERON:0002308!2.24e-09!9;UBERON:0000125!2.24e-09!9;UBERON:0000475!6.96e-09!365;UBERON:0000025!2.57e-08!194;UBERON:0009663!7.50e-08!7;UBERON:0001871!1.39e-07!7;UBERON:0003076!1.72e-07!15;UBERON:0003057!1.72e-07!15;UBERON:0000483!9.62e-07!309;UBERON:0000062!9.97e-07!511;UBERON:0000119!9.98e-07!312 | |ontology_enrichment_uberon=UBERON:0001017!3.00e-40!82;UBERON:0005743!1.67e-39!86;UBERON:0000073!1.81e-39!94;UBERON:0001016!1.81e-39!94;UBERON:0001049!2.29e-35!57;UBERON:0005068!2.29e-35!57;UBERON:0006241!2.29e-35!57;UBERON:0007135!2.29e-35!57;UBERON:0000955!4.07e-32!69;UBERON:0006238!4.07e-32!69;UBERON:0001893!6.82e-31!34;UBERON:0002020!9.87e-31!34;UBERON:0003528!9.87e-31!34;UBERON:0002780!2.50e-30!41;UBERON:0001890!2.50e-30!41;UBERON:0006240!2.50e-30!41;UBERON:0002791!4.45e-30!33;UBERON:0001869!2.63e-29!32;UBERON:0003080!3.18e-29!42;UBERON:0002616!1.55e-28!59;UBERON:0003075!3.66e-26!86;UBERON:0007284!3.66e-26!86;UBERON:0002346!8.25e-25!90;UBERON:0000956!9.43e-23!25;UBERON:0000203!9.43e-23!25;UBERON:0003056!1.20e-22!61;UBERON:0004121!5.98e-22!169;UBERON:0000924!2.55e-21!173;UBERON:0006601!2.55e-21!173;UBERON:0002619!6.41e-20!22;UBERON:0001950!3.60e-18!20;UBERON:0000033!5.01e-18!123;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0007023!1.75e-14!115;UBERON:0000064!1.67e-11!219;UBERON:0002420!1.86e-09!9;UBERON:0007245!1.86e-09!9;UBERON:0010009!1.86e-09!9;UBERON:0010011!1.86e-09!9;UBERON:0000454!1.86e-09!9;UBERON:0002308!2.24e-09!9;UBERON:0000125!2.24e-09!9;UBERON:0000475!6.96e-09!365;UBERON:0000025!2.57e-08!194;UBERON:0009663!7.50e-08!7;UBERON:0001871!1.39e-07!7;UBERON:0003076!1.72e-07!15;UBERON:0003057!1.72e-07!15;UBERON:0000483!9.62e-07!309;UBERON:0000062!9.97e-07!511;UBERON:0000119!9.98e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.43e-42;32!UBERON:0003528;2.01e-42;34!UBERON:0002020;2.01e-42;34!UBERON:0001893;2.16e-42;34!UBERON:0002791;2.53e-42;32!UBERON:0000956;5.90e-36;25!UBERON:0000203;5.90e-36;25!UBERON:0002780;2.54e-34;41!UBERON:0001890;2.54e-34;41!UBERON:0002619;2.65e-31;22!UBERON:0000073;4.40e-31;53!UBERON:0002616;4.40e-31;53!UBERON:0001950;1.68e-28;20!UBERON:0001017;7.14e-24;75!UBERON:0000955;6.87e-23;68!UBERON:0001016;2.26e-22;83!UBERON:0000125;2.75e-14;9!UBERON:0002308;2.75e-14;9!UBERON:0002420;2.91e-14;9!UBERON:0007245;2.91e-14;9!UBERON:0010009;2.91e-14;9!UBERON:0010011;2.91e-14;9!UBERON:0000454;2.91e-14;9!UBERON:0009663;8.44e-12;7!UBERON:0001871;2.18e-10;6!UBERON:0004732;2.67e-10;13!UBERON:0011216;5.34e-09;132!UBERON:0004733;7.25e-09;12!UBERON:0002028;7.25e-09;12!UBERON:0000200;7.63e-09;6!UBERON:0000349;1.63e-08;5!UBERON:0000369;2.97e-08;4!UBERON:0002435;2.97e-08;4!UBERON:0000204;2.97e-08;4!UBERON:0001872;2.99e-08;5!UBERON:0002021;5.97e-08;5!UBERON:0002680;1.45e-07;9!UBERON:0001895;1.45e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.73e-62,89;UBERON:0001017,6.18e-61,81;UBERON:0001049,1.30e-58,56;UBERON:0005068,1.30e-58,56;UBERON:0006241,1.30e-58,56;UBERON:0007135,1.30e-58,56;UBERON:0000073,1.08e-54,53;UBERON:0002616,1.08e-54,53;UBERON:0000955,4.69e-52,68;UBERON:0006238,4.69e-52,68;UBERON:0001893,1.66e-49,34;UBERON:0003528,3.04e-49,34;UBERON:0002020,3.04e-49,34;UBERON:0002780,1.48e-47,41;UBERON:0001890,1.48e-47,41;UBERON:0003080,1.48e-47,41;UBERON:0006240,1.48e-47,41;UBERON:0001869,6.60e-47,32;UBERON:0002791,1.23e-46,32;UBERON:0003075,1.13e-40,82;UBERON:0007284,1.13e-40,82;UBERON:0002346,5.17e-38,86;UBERON:0000956,3.67e-36,25;UBERON:0000203,3.67e-36,25;UBERON:0003056,7.66e-34,61;UBERON:0004121,3.24e-33,171;UBERON:0000924,3.24e-33,171;UBERON:0006601,3.24e-33,171;UBERON:0010371,1.34e-31,104;UBERON:0002619,1.60e-31,22;UBERON:0011216,3.46e-29,223;UBERON:0001950,1.16e-28,20;UBERON:0010314,1.80e-22,132;UBERON:0007023,2.85e-16,114;UBERON:0002420,1.99e-14,9;UBERON:0007245,1.99e-14,9;UBERON:0010009,1.99e-14,9;UBERON:0010011,1.99e-14,9;UBERON:0000454,1.99e-14,9;UBERON:0000125,2.70e-14,9;UBERON:0002308,2.70e-14,9;UBERON:0003076,4.13e-12,15;UBERON:0003057,4.13e-12,15;UBERON:0000025,4.52e-12,192;UBERON:0009663,8.11e-12,7;UBERON:0001871,2.62e-10,6;UBERON:0004732,4.03e-10,13;UBERON:0004111,3.31e-09,240;UBERON:0000200,9.04e-09,6;UBERON:0000349,1.03e-08,5;UBERON:0004733,1.07e-08,12;UBERON:0002028,1.07e-08,12;UBERON:0007277,1.07e-08,12;UBERON:0000369,2.99e-08,4;UBERON:0002435,2.99e-08,4;UBERON:0000204,2.99e-08,4;UBERON:0010082,2.99e-08,4;UBERON:0001872,3.18e-08,5;UBERON:0000483,3.79e-08,306;UBERON:0002021,4.69e-08,5;UBERON:0000119,6.60e-08,309;UBERON:0002680,1.99e-07,9;UBERON:0001895,1.99e-07,9;UBERON:0010092,1.99e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,1.39560233594486,1.52908960491121,2.11013582582763,0,0,0,0,0,0,2.33930010345897,0,5.64218498660558,9.15955158819382,11.771200556268,3.51519390865448,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0,1.37528029272598,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,1.91428986632517,0.508681776931463,0,0,0,0.121973706129595,0.397589304964456,0.580969714347592,0.725627385107593,1.51392510525377,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,2.43453850447661,0,0,0,0,44.2514462857194,46.3582527531231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6471785495789,18.219579540067,7.73288812777695,8.71084579738614,10.8449587781038,0,0,0,0,0,0,0.623912584592421,0.892144943985809,0.157702415033935,0.585707074963566,0,0,0,0,0,0,0,1.71571711905428,0,0,0,1.5156378572313,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.721287081534056,0.732555718546747,0.82509499920588,0,0,0,0.193341436584244,0,0,0,0,0.290033387828457,0.596586391912706,4.89676196057055,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.67268212749375,0,1.9882952955326,6.18945432206256,0,0,0,0.19924798825107,0,1.51159648712566,9.61325615520255,0,0,0.179736702294654,1.79021174675609,0,0.0986434056369336,0,0,4.84666373047609,2.04089815956073,13.9729658600836,39.064164162785,3.93569999982881,0,0.341380344856499,0,0.236387681767936,3.44743373241465,0,2.43074992906609,7.97167247232455,17.8482729165604,0,1.43753037910592,1.47773809476774,1.75508317723178,0,4.87983104975112,0.461701551022782,0,0,0.538545866458633,0,0.31900115973192,1.4655614944298,0,0,0,0,0,0,0,0,0,0,3.7543545876604,1.97894300007517,0,0,0,0,0,0,0,4.9876838405701,0,7.96499115466153,0,6.45693242475896,0.728341138602278,0,1.20990716048664,14.997565319894,0.063186579628488,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,2.77695581336209,0.587954384486266,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,3.98858014522036,1.56441106187842,0,0,0.19980960958213,0.288180834308212,0,2.05913997434357,0,0,1.88555227693436,3.66941356398758,4.70712808405499,0.815985741090574,0,3.60252173225874,3.28572909340783,0,2.57859264851974,0,0,0,0,1.59743200399193,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,0,0.247247575143499,0,0.984274815147488,0,4.77137813885582,3.94989877723569,0,0.412618309791701,0.415440338029185,0,0,6.01420610914444,1.67717343799633,0.0788057072991982,0.209818352539992,0.211200673038813,0.35857467866569,9.59575986597226,0,0,0,0,0,0,3.59190574687462,0,0,0.113312091520126,0,0,2.45637617086946,3.43804764530994,1.02652102730598,9.16259529011673,0.747511887973863,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,2.35581144375351,3.54427271986794,1.34228891392159,1.8778639605975,0,1.33114861844223,4.90561583236929,0,0,0,0,0,4.21501415226193,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0.260994291965212,1.58694147858591,0,0,1.79088841081487,3.39681591877069,0.657852148736121,0.353378291891762,0.38582807654183,0.168942440653073,0.256241518587947,4.83602478423678,0,2.07387654227596,0,0.132864840313363,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0,0,1.70254786070051,0,0,0,4.09261988171685,8.51816010033786,0,7.53546503524896,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0.3062454773532,10.2124467903371,2.8339315265117,3.51194489925733,1.64093091392604,6.30179240554295,3.73449163306777,3.39098855826887,12.8492478233239,0,2.24142474360707,0.183428598521679,3.9278726491115,0,0.690359926060101,0.596748666348824,0.0752103283492573,0.40341013740704,0,0,0,1.33070477595341,3.37687923091973,2.34323429584154,2.06686796501184,2.98054307911362,10.3925213713462,0,0,0.175871244359621,1.91643641459393,0.535701835878287,0,0,0,0.0887023701626388,0,0,3.05863798395743,4.27523028158519,0,0.222462803784138,1.49136876415977,14.4546342722722,6.16598759290336,1.82631744101899,0,0,0.214429632529969,0.158013611732727,3.02227705957126,0,0,0,0,0,0,0,0,0,6.64409918777745,0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| ||
|short_description=p3@CACNG4 | |short_description=p3@CACNG4 | ||
}} | }} |
Latest revision as of 21:36, 16 September 2015
Short description: | p3@CACNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNG4_5end |
Coexpression cluster: | C3666_MCF7_breast_Neural_brain_duodenum_temporal_parietal |
Association with transcript: | -127bp_to_NM_014405_5end |
EntrezGene: | CACNG4 |
HGNC: | 1408 |
UniProt: | Q9UBN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.44e-10 | 25 |
oligodendrocyte | 7.95e-09 | 7 |
macroglial cell | 7.95e-09 | 7 |
astrocyte | 7.95e-09 | 7 |
oligodendrocyte precursor cell | 7.95e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.26e-08 | 4 |
breast cancer | 3.26e-08 | 4 |