FFCP PHASE1:Hg19::chr1:245025974..245025996,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:245025974..245025996,- to FFCP PHASE1:Hg19::chr1:245025974..245025996,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3192 | |EntrezGene=3192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5048 | |HGNC=5048 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK130669_5end | |||
|cluster_id=chr1:245025974..245025996,- | |||
|description=CAGE_peak_11_at_HNRNPU_5end | |||
|id=chr1:245025974..245025996,- | |||
|ontology_enrichment_celltype=CL:0002032!8.57e-19!165;CL:0000837!8.57e-19!165;CL:0000037!1.48e-18!172;CL:0000566!1.48e-18!172;CL:0000988!4.97e-17!182;CL:0002087!1.03e-16!119;CL:0002031!5.42e-15!124;CL:0000738!5.59e-15!140;CL:0000860!1.23e-10!45;CL:0002057!4.15e-10!42;CL:0000542!7.18e-10!53;CL:0000051!7.18e-10!53;CL:0000763!1.23e-09!112;CL:0000049!1.23e-09!112;CL:0000838!2.33e-09!52;CL:0000219!1.57e-08!390;CL:0002009!2.39e-08!65;CL:0002194!8.85e-08!63;CL:0000576!8.85e-08!63;CL:0000040!8.85e-08!63;CL:0000559!8.85e-08!63;CL:0000063!1.63e-07!578;CL:0000134!3.12e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-13;33!CL:0002057;5.96e-13;33!CL:0000473;4.04e-09;39!CL:0000234;4.04e-09;39!CL:0000576;1.92e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.97e-20,161;CL:0000837,3.97e-20,161;CL:0000037,4.78e-20,168;CL:0000988,1.21e-19,177;CL:0002087,9.21e-18,115;CL:0000738,7.61e-16,136;CL:0002031,2.42e-15,120;CL:0000860,2.80e-11,42;CL:0002057,2.80e-11,42;CL:0000763,7.63e-11,108;CL:0000049,7.63e-11,108;CL:0000473,8.15e-10,48;CL:0000234,8.15e-10,48;CL:0000542,1.05e-09,53;CL:0000051,1.05e-09,53;CL:0002009,1.48e-09,61;CL:0000838,4.15e-09,52;CL:0002194,7.82e-09,59;CL:0000576,7.82e-09,59;CL:0000040,7.82e-09,59;CL:0000559,7.82e-09,59;CL:0000557,1.60e-07,67;CL:0000766,8.81e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.11e-09;42 | |||
|ontology_enrichment_disease=DOID:162!9.62e-23!235;DOID:14566!1.22e-22!239;DOID:2531!1.33e-12!51;DOID:0060083!1.33e-12!51;DOID:0050686!4.71e-11!137;DOID:1240!4.39e-09!39;DOID:0050687!7.00e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.92e-09;51!DOID:0060083;2.92e-09;51!DOID:1240;4.45e-09;39!DOID:8692;2.32e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.17e-23,235;DOID:14566,2.60e-22,239;DOID:2531,2.22e-15,51;DOID:0060083,2.22e-15,51;DOID:0050686,5.62e-12,137;DOID:1240,2.80e-11,39;DOID:0050687,1.06e-07,143;DOID:8692,2.63e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p11@HNRNPU | |||
}} | }} |
Latest revision as of 21:16, 16 September 2015
Short description: | p11@HNRNPU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HNRNPU_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK130669_5end |
EntrezGene: | HNRNPU |
HGNC: | 5048 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.97e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-20 | 161 |
hematopoietic stem cell | 4.78e-20 | 168 |
hematopoietic cell | 1.21e-19 | 177 |
nongranular leukocyte | 9.21e-18 | 115 |
leukocyte | 7.61e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 2.42e-15 | 120 |
classical monocyte | 2.80e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-11 | 42 |
myeloid cell | 7.63e-11 | 108 |
common myeloid progenitor | 7.63e-11 | 108 |
defensive cell | 8.15e-10 | 48 |
phagocyte | 8.15e-10 | 48 |
lymphocyte | 1.05e-09 | 53 |
common lymphoid progenitor | 1.05e-09 | 53 |
macrophage dendritic cell progenitor | 1.48e-09 | 61 |
lymphoid lineage restricted progenitor cell | 4.15e-09 | 52 |
monopoietic cell | 7.82e-09 | 59 |
monocyte | 7.82e-09 | 59 |
monoblast | 7.82e-09 | 59 |
promonocyte | 7.82e-09 | 59 |
granulocyte monocyte progenitor cell | 1.60e-07 | 67 |
myeloid leukocyte | 8.81e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.17e-23 | 235 |
disease of cellular proliferation | 2.60e-22 | 239 |
hematologic cancer | 2.22e-15 | 51 |
immune system cancer | 2.22e-15 | 51 |
organ system cancer | 5.62e-12 | 137 |
leukemia | 2.80e-11 | 39 |
cell type cancer | 1.06e-07 | 143 |
myeloid leukemia | 2.63e-07 | 31 |