FFCP PHASE1:Hg19::chr8:143781432..143781443,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:143781432..143781443,+
|short_description=p7@LY6K
|description=CAGE_peak_7_at_LY6K_5end
|association_with_transcript=-85bp_to_ENST00000292430,ENST000005611...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54742 | |EntrezGene=54742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24225 | |HGNC=24225 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RY6 | |UniProt=Q17RY6 | ||
|association_with_transcript=-85bp_to_ENST00000292430,ENST00000561179,NM_001160354,NM_001160355,NM_017527,uc011ljv.1,uc011ljw.1,uc011ljx.1_5end | |||
|cluster_id=chr8:143781432..143781443,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_7_at_LY6K_5end | |||
|id=chr8:143781432..143781443,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.33e-16!45;CL:0002057!4.88e-13!42;CL:0002194!2.68e-09!63;CL:0000576!2.68e-09!63;CL:0000040!2.68e-09!63;CL:0000559!2.68e-09!63;CL:0002009!8.29e-09!65;CL:0000839!1.02e-07!70;CL:0000557!1.62e-07!71;CL:0000066!3.60e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.06e-26;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.92e-13,106;DOID:0050687,2.78e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-16!9;UBERON:0001557!1.19e-14!19;UBERON:0000072!7.83e-10!46;UBERON:0000065!8.69e-08!53;UBERON:0000467!1.18e-07!625;UBERON:0004119!1.18e-07!169;UBERON:0000925!1.18e-07!169;UBERON:0006595!1.18e-07!169;UBERON:0000480!1.35e-07!626;UBERON:0001004!1.44e-07!72;UBERON:0008947!2.02e-07!38;UBERON:0003258!2.02e-07!38;UBERON:0002371!2.87e-07!80;UBERON:0000926!2.99e-07!448;UBERON:0004120!2.99e-07!448;UBERON:0006603!2.99e-07!448;UBERON:0000062!3.24e-07!511;UBERON:0004765!3.52e-07!101;UBERON:0001434!3.52e-07!101;UBERON:0000923!3.64e-07!604;UBERON:0005291!3.64e-07!604;UBERON:0006598!3.64e-07!604;UBERON:0002532!3.64e-07!604;UBERON:0002050!4.16e-07!605;UBERON:0005423!4.16e-07!605;UBERON:0000468!4.83e-07!659;UBERON:0001007!6.05e-07!155;UBERON:0001555!6.05e-07!155;UBERON:0007026!6.05e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-85;9!UBERON:0001557;2.07e-85;9!UBERON:0000072;1.08e-18;37!UBERON:0000065;8.77e-16;44!UBERON:0001004;4.27e-10;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.54e-86,9;UBERON:0001557,1.92e-49,19;UBERON:0008947,1.67e-19,38;UBERON:0003258,1.67e-19,38;UBERON:0000072,3.63e-19,47;UBERON:0000065,1.71e-16,54;UBERON:0001041,9.30e-12,87;UBERON:0001004,1.23e-11,74;UBERON:0004921,3.91e-08,118 | |||
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| ||
|short_description=p7@LY6K | |||
}} | }} |
Latest revision as of 21:14, 16 September 2015
Short description: | p7@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -85bp_to_ENST00000292430, ENST00000561179, NM_001160354, NM_001160355, NM_017527, uc011ljv.1, uc011ljw.1, uc011ljx.1_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | Q17RY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.54e-86 | 9 |
upper respiratory tract | 1.92e-49 | 19 |
respiratory primordium | 1.67e-19 | 38 |
endoderm of foregut | 1.67e-19 | 38 |
segment of respiratory tract | 3.63e-19 | 47 |
respiratory tract | 1.71e-16 | 54 |
foregut | 9.30e-12 | 87 |
respiratory system | 1.23e-11 | 74 |
subdivision of digestive tract | 3.91e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.92e-13 | 106 |
cell type cancer | 2.78e-09 | 143 |