FFCP PHASE1:Hg19::chr11:13690279..13690290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84188 | |EntrezGene=84188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26222 | |HGNC=26222 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETC1 | |UniProt=E7ETC1 | ||
|association_with_transcript=15bp_to_ENST00000355107_5end | |association_with_transcript=15bp_to_ENST00000355107_5end | ||
|cluster_id=chr11:13690279..13690290,+ | |||
|description=CAGE_peak_3_at_FAR1_5end | |description=CAGE_peak_3_at_FAR1_5end | ||
|id=chr11:13690279..13690290,+ | |id=chr11:13690279..13690290,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.31e-20!76;CL:0000839!1.45e-20!70;CL:0000557!7.61e-20!71;CL:0002194!4.13e-18!63;CL:0000576!4.13e-18!63;CL:0000040!4.13e-18!63;CL:0000559!4.13e-18!63;CL:0002009!1.45e-17!65;CL:0002057!1.71e-17!42;CL:0000763!2.03e-17!112;CL:0000049!2.03e-17!112;CL:0000860!1.09e-16!45;CL:0002032!1.60e-08!165;CL:0000837!1.60e-08!165;CL:0000037!9.18e-08!172;CL:0000566!9.18e-08!172;CL:0002031!9.37e-08!124;CL:0000738!2.98e-07!140;CL:0000988!6.75e-07!182 | |ontology_enrichment_celltype=CL:0000766!1.31e-20!76;CL:0000839!1.45e-20!70;CL:0000557!7.61e-20!71;CL:0002194!4.13e-18!63;CL:0000576!4.13e-18!63;CL:0000040!4.13e-18!63;CL:0000559!4.13e-18!63;CL:0002009!1.45e-17!65;CL:0002057!1.71e-17!42;CL:0000763!2.03e-17!112;CL:0000049!2.03e-17!112;CL:0000860!1.09e-16!45;CL:0002032!1.60e-08!165;CL:0000837!1.60e-08!165;CL:0000037!9.18e-08!172;CL:0000566!9.18e-08!172;CL:0002031!9.37e-08!124;CL:0000738!2.98e-07!140;CL:0000988!6.75e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.09e-35;33!CL:0002057;5.09e-35;33!CL:0000473;1.09e-27;39!CL:0000234;1.09e-27;39!CL:0000576;2.22e-19;48!CL:0000766;2.23e-15;69!CL:0000763;4.01e-10;100 | |ontology_enrichment_celltype_v019=CL:0000860;5.09e-35;33!CL:0002057;5.09e-35;33!CL:0000473;1.09e-27;39!CL:0000234;1.09e-27;39!CL:0000576;2.22e-19;48!CL:0000766;2.23e-15;69!CL:0000763;4.01e-10;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.52e-35,72;CL:0000839,7.48e-33,66;CL:0000557,2.50e-32,67;CL:0000860,1.62e-30,42;CL:0002057,1.62e-30,42;CL:0002194,2.55e-30,59;CL:0000576,2.55e-30,59;CL:0000040,2.55e-30,59;CL:0000559,2.55e-30,59;CL:0000473,2.20e-29,48;CL:0000234,2.20e-29,48;CL:0002009,5.86e-29,61;CL:0000763,1.15e-26,108;CL:0000049,1.15e-26,108;CL:0000738,2.74e-15,136;CL:0002032,7.44e-15,161;CL:0000837,7.44e-15,161;CL:0002031,1.47e-14,120;CL:0000037,2.34e-14,168;CL:0000988,8.92e-14,177;CL:0002087,7.41e-13,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-22;42!CL:0000049;2.21e-08;108 | |ontology_enrichment_development_v019=CL:0002057;2.58e-22;42!CL:0000049;2.21e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.58e-17!80;UBERON:0002390!2.76e-15!102;UBERON:0003061!2.76e-15!102;UBERON:0001474!9.24e-15!86;UBERON:0002193!4.97e-14!112;UBERON:0004765!8.95e-13!101;UBERON:0001434!8.95e-13!101;UBERON:0000062!1.23e-08!511;UBERON:0002405!1.53e-08!115;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0001017!9.61e-07!82 | |ontology_enrichment_uberon=UBERON:0002371!5.58e-17!80;UBERON:0002390!2.76e-15!102;UBERON:0003061!2.76e-15!102;UBERON:0001474!9.24e-15!86;UBERON:0002193!4.97e-14!112;UBERON:0004765!8.95e-13!101;UBERON:0001434!8.95e-13!101;UBERON:0000062!1.23e-08!511;UBERON:0002405!1.53e-08!115;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0001017!9.61e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.24e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002298;6.24e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-28,76;UBERON:0004765,2.80e-26,90;UBERON:0001474,1.70e-25,82;UBERON:0002390,4.52e-23,98;UBERON:0003061,4.52e-23,98;UBERON:0001434,2.53e-22,100;UBERON:0002405,5.15e-21,93;UBERON:0002193,1.01e-19,108;UBERON:0002204,1.08e-11,167;UBERON:0003081,4.11e-08,203;UBERON:0002298,2.09e-07,6;UBERON:0002050,2.32e-07,564;UBERON:0005423,6.04e-07,581;UBERON:0001049,7.84e-07,56;UBERON:0005068,7.84e-07,56;UBERON:0006241,7.84e-07,56;UBERON:0007135,7.84e-07,56;UBERON:0000922,8.86e-07,592 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0,0,0,0,1.46062018077475,0,0,0,0,0.85870796139317,0.136874425072884,0.376627918784408,0.229240217243854,0.0821005894499457,0.236132343941038,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,1.47187681102573,0.426507697462265,0.293600439334847,1.10799081706375,0.200544447470142,0.434021741431704,0.447830948479849,1.94336199611388,0.515151135268373,1.30858414901608,1.13362783106643,1.69808842831471,1.16214518452842,1.23350366406548,2.16794459626573,0.575384784644301,1.0246428261164,3.07426898855161,1.72372840368309,1.29096936716765,2.70852973188684,1.88242339542605,1.63743690034707,3.14612878223118,2.14258724659632,3.53021929783703,3.19668562899521,1.9791078011203,1.19678194572979,2.98357325372886,3.77272010217159,4.53908179752912,1.24564449799115,1.25624332628372,1.5644487552606,4.34377689410233,1.21079900526674,2.57794345191295,2.84816148696796,0.422510572623884,0.212604299965044,0.209658645508376,0.336985893439485,0.901061357049038,0.803627933485401,0.285012743741249,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,1.30216690771284,0,0,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.472674085820339,0.665188192387692,0.263504357079378,0.523916301990851,0,0,1.29818957461873,1.39303789839414,0.797747763113191,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0.446498641420399,0.898117490504679,0.788280363383256,0,0,0,2.63560834872127,3.87780264148325,0,0,0.506522046658319,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.794025282120147,0.717558542755448,0.213557388818567,0.635795703478686,0.300091096084402,0.206105058476878,0,0.744467425326359,0.675105328965065,0.779496041289589,0.504867548488229,0.276149695926898,0.969876340912871,0.710019185033229,0.201504196455281,0.169560592310488,0.57978255948989,0.545492241181669,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0.756962552626885,1.45990943630332,1.56449532329816,0,0,0,0,0.473227200159376,0,1.20505514941741,0.772057809126758,0.653638332277218,0.237270619111097,0.674156540800822,0.392442930250692,1.15424147083917,0,1.40241773803446,0,0,0,0,0,0,1.10689594688802,0,0.439001141634502,1.1240175325762,0.100528972411631,0.370353780634118,0.325808305310325,1.03993478527958,1.44331342025273,0.231860809950154,0.70445216541493,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.738651018262192,1.8720341211139,1.0404181360211,1.87467667973554,1.34385702559088,1.13420077793909,0.806026704325635,0.581267877027924,0,2.46331618947972,1.32072651019839,0.414656231081544,1.15295962733569,0.75745460055828,0.380987365753014,0,0,0,0.308482478109971,0.300343057843917,0,0.224262168690721,0,0.5867062865676,0.387815147273333,0,0,0,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0.289562613335158,1.02738161275192,1.07436577943937,0.336255431980582,0,0.431255149719035,0.256686072559497,0.508189248444927,0,0,0,1.27587750330633,3.74503511973591,0,3.72973962092432,0.12269149171914,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,1.03384013061444,0,0.426910231213777,0.303127571446259,0,0.30239029332968,0.248107807818777,0.767309866440312,0.280660094433074,0.896974044789907,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.232420756919918,2.05461064305758,0.601519410909855,0.368323955743585,0.34444334449382,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0.650756789328606,0,0.27470839445503,0.495056999523528,0.574265537996172,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0.689182862422653,0.644521469209642,0.290033387828457,0.596586391912706,0.267096106940212,1.32227932288782,0.768760269460425,4.21121951232128,0.6069466851333,0,2.20368642781448,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0.687743287091848,0,0,0.42221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| ||
|short_description=p3@FAR1 | |short_description=p3@FAR1 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p3@FAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000355107_5end |
EntrezGene: | FAR1 |
HGNC: | 26222 |
UniProt: | E7ETC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.52e-35 | 72 |
myeloid lineage restricted progenitor cell | 7.48e-33 | 66 |
granulocyte monocyte progenitor cell | 2.50e-32 | 67 |
classical monocyte | 1.62e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-30 | 42 |
monopoietic cell | 2.55e-30 | 59 |
monocyte | 2.55e-30 | 59 |
monoblast | 2.55e-30 | 59 |
promonocyte | 2.55e-30 | 59 |
defensive cell | 2.20e-29 | 48 |
phagocyte | 2.20e-29 | 48 |
macrophage dendritic cell progenitor | 5.86e-29 | 61 |
myeloid cell | 1.15e-26 | 108 |
common myeloid progenitor | 1.15e-26 | 108 |
leukocyte | 2.74e-15 | 136 |
hematopoietic oligopotent progenitor cell | 7.44e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.44e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.47e-14 | 120 |
hematopoietic stem cell | 2.34e-14 | 168 |
hematopoietic cell | 8.92e-14 | 177 |
nongranular leukocyte | 7.41e-13 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-28 | 76 |
skeletal element | 2.80e-26 | 90 |
bone element | 1.70e-25 | 82 |
hematopoietic system | 4.52e-23 | 98 |
blood island | 4.52e-23 | 98 |
skeletal system | 2.53e-22 | 100 |
immune system | 5.15e-21 | 93 |
hemolymphoid system | 1.01e-19 | 108 |
musculoskeletal system | 1.08e-11 | 167 |
lateral plate mesoderm | 4.11e-08 | 203 |
brainstem | 2.09e-07 | 6 |
embryonic structure | 2.32e-07 | 564 |
developing anatomical structure | 6.04e-07 | 581 |
neural tube | 7.84e-07 | 56 |
neural rod | 7.84e-07 | 56 |
future spinal cord | 7.84e-07 | 56 |
neural keel | 7.84e-07 | 56 |
embryo | 8.86e-07 | 592 |