FFCP PHASE1:Hg19::chr13:24153488..24153553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |EntrezGene=55504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |HGNC=11915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS68 | |UniProt=Q9NS68 | ||
|association_with_transcript=0bp_to_ENST00000382258,ENST00000382263,ENST00000464735,NM_001204458,NM_018647_5end | |association_with_transcript=0bp_to_ENST00000382258,ENST00000382263,ENST00000464735,NM_001204458,NM_018647_5end | ||
|cluster_id=chr13:24153488..24153553,+ | |||
|coexpression_cluster_id=C2257 | |||
|description=CAGE_peak_1_at_TNFRSF19_5end | |description=CAGE_peak_1_at_TNFRSF19_5end | ||
|id=chr13:24153488..24153553,+ | |id=chr13:24153488..24153553,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.49e-25!180;CL:0000057!1.10e-13!75;CL:0002620!1.15e-08!23 | |ontology_enrichment_celltype=CL:0000055!2.49e-25!180;CL:0000057!1.10e-13!75;CL:0002620!1.15e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.87e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.55e-12,76;CL:0002620,3.62e-09,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.53e-22!365;UBERON:0000481!3.00e-17!347;UBERON:0003102!1.35e-12!95;UBERON:0000914!3.24e-11!83;UBERON:0002329!3.24e-11!83;UBERON:0003077!3.24e-11!83;UBERON:0003059!3.24e-11!83;UBERON:0007282!3.24e-11!83;UBERON:0009618!3.24e-11!83;UBERON:0007285!3.24e-11!83;UBERON:0005256!6.24e-11!143;UBERON:0002100!2.57e-09!216;UBERON:0003104!5.10e-09!238;UBERON:0009142!5.10e-09!238;UBERON:0000119!8.49e-09!312;UBERON:0000483!2.26e-08!309;UBERON:0004290!2.28e-08!70;UBERON:0002199!4.29e-08!45;UBERON:0002416!4.29e-08!45;UBERON:0000062!5.27e-08!511;UBERON:0002097!8.04e-08!40;UBERON:0000033!2.38e-07!123;UBERON:0000153!3.06e-07!129;UBERON:0007811!3.06e-07!129;UBERON:0000468!3.57e-07!659;UBERON:0000486!5.24e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.79e-11,99;UBERON:0003104,4.02e-09,160;UBERON:0009142,4.02e-09,160;UBERON:0010314,4.97e-08,132;UBERON:0007524,5.62e-08,73;UBERON:0002097,9.32e-08,41;UBERON:0002199,1.02e-07,46;UBERON:0002416,1.02e-07,46;UBERON:0002329,1.34e-07,71;UBERON:0003059,1.34e-07,71;UBERON:0007282,1.34e-07,71;UBERON:0004290,1.34e-07,71;UBERON:0009618,1.34e-07,71;UBERON:0003077,1.53e-07,72;UBERON:0007285,1.53e-07,72;UBERON:0000119,1.90e-07,309;UBERON:0005256,3.77e-07,122;UBERON:0000483,4.85e-07,306;UBERON:0011216,8.82e-07,223 | |||
|phase1_expression=0.54503513781167,3.21150785836475,1.55049844505568,3.00219895059391,0,1.74467704820074,12.6649939084155,0.631719873426831,0.261185628199839,3.19454117451962,2.09340350391728,0,0,19.1837847088072,21.2094320465866,3.36162573225888,3.01347264011988,0,4.87932798790507,1.84681587115182,2.04000691244253,3.13454721478088,9.15955158819382,5.33810257784248,22.2210472082801,0.458480434487708,0.738905305049512,0.314843125254717,0,0.383829398097213,0,0,0.6024118375565,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,1.20118796110804,1.14950487990897,2.64417949113945,1.90810750907073,0,0.587237189370939,0.764546456250458,0,0.560508562981536,1.31692042387539,0.393419540227666,0.393010762749165,1.02800749499755,0,0,0.473447805734733,1.94826728407911,1.33692548262208,4.41908861212256,4.43067789167242,4.33286182024025,0.25618263945135,0.520237390239513,0,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0,0.289648807765598,7.31420598941885,7.37770945674,2.55725123687061,3.2529523714611,4.51204119572301,8.11140506180613,5.5670016293577,6.8128881842369,5.86115866417221,12.6385756553661,10.8915134259476,4.91171533116422,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0.286836620748814,2.12801029319014,1.68203280042692,1.06748995729705,3.7000132262574,7.46906484959439,3.23305612967251,1.30769522490767,13.0167387774641,11.5235184896,4.92075006850973,9.36480230490961,0.570471821544449,6.72519062483105,4.57994544710683,10.6836143282967,10.5338105026686,5.10385428137233,9.2125737983826,11.2625101481584,81.9721971524617,59.5913299561322,3.64064544775211,2.87447256726495,10.7735112930602,8.75829639103749,6.37247465613621,46.5316278133688,26.6644382345147,45.071417671979,1.70148274740032,6.81680615617675,11.9592137738398,10.172731255659,21.606558918077,15.973142031958,15.4584324027377,18.7978024894906,22.1096995236059,7.3077753870899,16.6606291001116,19.8827781067367,15.6796675114248,26.6257194387461,13.6015332607314,9.83451435400828,0.773043412653187,0,0.860413786167011,0.975789649036763,1.98794652482228,2.5562667431294,2.38420426535352,4.03713361401005,2.55484151353081,7.8224766164908,9.64861407289328,12.4321429217232,4.64367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,23.4907917617347,0.857839051492628,0.329250856225877,1.1240175325762,0.603173834469785,0,3.25808305310325,5.19967392639789,2.88662684050547,0.927443239800615,3.28744343860301,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.283550194484773,0,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.720599767084807,0.25248486685276,2.53991577168676,2.67391897890794,1.17217447210047,1.71072446022705,4.01027221542962,4.50514586765876,3.71574362419752,5.94294747030412,6.10344096366592,3.00686971865895,2.84397774667111,3.57656445851882,0,19.4134825106955,24.9617848587279,18.0045161983499,7.09245660116391,14.1203754878533,4.28933980974443,1.62786481617433,0,0.325736184293735,6.04166312862328,0,0,0,0.099972991182057,0,0,0,0.958499421966331,2.29723871668228,2.85273810081437,0.868687840005475,2.05476322550383,2.86497541183833,0,0.197030760201927,0,0.385029108839245,2.7950408664471,1.30139853857622,3.86644406388848,2.34522771468088,2.55175500661265,0.749007023947182,0,0,10.9195427630035,12.5042630264919,31.7380077728691,2.49565033836969,0.356857977594324,1.10391690523754,7.26276772954822,23.1728496790344,18.1926003244788,7.24311499047534,9.29915837949611,24.3367302475048,23.3716922919143,3.13281851940385,6.86286847621712,0.206768026122887,0.431428401637234,0,0,1.66435439510497,0.604780586659361,0.248107807818777,1.53461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,12.7994045856204,3.01854933032316,13.2224721182233,24.9242126008138,5.92672930145792,28.7645490028061,1.00253235151642,4.32780647998713,12.6295892981067,29.1345868810747,17.5706716045628,3.60959690325929,1.92538342761037,0.784349769176855,0,5.59423633132241,0,0.170093705276516,1.72732732881711,0,1.35473218771926,1.50506932156456,3.05851527654046,4.15538004464362,1.79099803777743,0,0.261435451024901,0.769350375349168,4.92021968549559,2.60302715731442,4.73988653579522,7.96654343919588,6.60075999364704,1.14853107599234,0.650060246036521,1.6068392984416,9.6670718292122,0.462145851343933,0.460511024178389,0.827019434907183,2.79292636657511,6.0907011443976,0.93749290157711,5.51998621009772,1.98341898433174,1.72971060628596,1.27612712494584,5.36136238534415,0,1.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| ||
|short_description=p1@TNFRSF19 | |short_description=p1@TNFRSF19 | ||
}} | }} |
Latest revision as of 20:57, 16 September 2015
Short description: | p1@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF19_5end |
Coexpression cluster: | C2257_gastric_Fibroblast_synovial_alveolar_osteosarcoma_Smooth_mesenchymal |
Association with transcript: | 0bp_to_ENST00000382258, ENST00000382263, ENST00000464735, NM_001204458, NM_018647_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.55e-12 | 76 |
skin fibroblast | 3.62e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.79e-11 | 99 |
mesenchyme | 4.02e-09 | 160 |
entire embryonic mesenchyme | 4.02e-09 | 160 |
structure with developmental contribution from neural crest | 4.97e-08 | 132 |
dense mesenchyme tissue | 5.62e-08 | 73 |
skin of body | 9.32e-08 | 41 |
integument | 1.02e-07 | 46 |
integumental system | 1.02e-07 | 46 |
somite | 1.34e-07 | 71 |
presomitic mesoderm | 1.34e-07 | 71 |
presumptive segmental plate | 1.34e-07 | 71 |
dermomyotome | 1.34e-07 | 71 |
trunk paraxial mesoderm | 1.34e-07 | 71 |
paraxial mesoderm | 1.53e-07 | 72 |
presumptive paraxial mesoderm | 1.53e-07 | 72 |
cell layer | 1.90e-07 | 309 |
trunk mesenchyme | 3.77e-07 | 122 |
epithelium | 4.85e-07 | 306 |
organ system subdivision | 8.82e-07 | 223 |