FFCP PHASE1:Hg19::chr2:128397978..128398005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000494613_5end | |association_with_transcript=0bp_to_ENST00000494613_5end | ||
|cluster_id=chr2:128397978..128398005,- | |||
|description=CAGE_peak_17_at_LIMS2_5end | |description=CAGE_peak_17_at_LIMS2_5end | ||
|id=chr2:128397978..128398005,- | |id=chr2:128397978..128398005,- | ||
|ontology_enrichment_celltype=CL:0000542!2.42e-20!53;CL:0000051!2.42e-20!53;CL:0000838!1.41e-19!52;CL:0000236!3.75e-14!14;CL:0000071!7.57e-13!18;CL:0002546!7.57e-13!18;CL:0000945!6.00e-12!24;CL:0000826!6.00e-12!24;CL:0002087!2.60e-09!119;CL:0000624!5.32e-09!6;CL:0002139!1.26e-08!24;CL:0000115!1.23e-07!35;CL:0000738!2.15e-07!140;CL:0000084!4.12e-07!25;CL:0000827!4.12e-07!25 | |ontology_enrichment_celltype=CL:0000542!2.42e-20!53;CL:0000051!2.42e-20!53;CL:0000838!1.41e-19!52;CL:0000236!3.75e-14!14;CL:0000071!7.57e-13!18;CL:0002546!7.57e-13!18;CL:0000945!6.00e-12!24;CL:0000826!6.00e-12!24;CL:0002087!2.60e-09!119;CL:0000624!5.32e-09!6;CL:0002139!1.26e-08!24;CL:0000115!1.23e-07!35;CL:0000738!2.15e-07!140;CL:0000084!4.12e-07!25;CL:0000827!4.12e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000898;2.13e-18;3!CL:0000236;1.83e-16;13!CL:0000815;7.48e-13;2!CL:0000792;7.48e-13;2!CL:0002677;7.48e-13;2!CL:0000542;7.03e-12;53!CL:0000624;1.81e-09;6!CL:0000945;1.14e-08;24!CL:0000895;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,1.53e-18,3;CL:0000236,2.84e-15,14;CL:0000815,5.88e-13,2;CL:0000792,5.88e-13,2;CL:0002677,5.88e-13,2;CL:0000838,3.52e-12,52;CL:0000542,6.53e-12,53;CL:0000051,6.53e-12,53;CL:0000624,1.54e-09,6;CL:0000945,1.11e-08,24;CL:0000826,1.11e-08,24;CL:0000810,2.66e-07,1;CL:0000895,2.66e-07,1;CL:0002436,2.66e-07,1;CL:0002427,2.66e-07,1;CL:0002428,2.66e-07,1;CL:0002429,2.66e-07,1;CL:0002433,2.66e-07,1;CL:0002431,2.66e-07,1;CL:0002432,2.66e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.03e-12;53!CL:0002427;2.91e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.57e-13!18;UBERON:0004638!7.57e-13!18;UBERON:0004852!7.57e-13!18;UBERON:0000487!9.13e-10!22;UBERON:0006914!1.92e-09!25 | |ontology_enrichment_uberon=UBERON:0001986!7.57e-13!18;UBERON:0004638!7.57e-13!18;UBERON:0004852!7.57e-13!18;UBERON:0000487!9.13e-10!22;UBERON:0006914!1.92e-09!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.22e-09;3!UBERON:0002171;2.91e-07;1!UBERON:0006518;2.91e-07;1!UBERON:0008949;2.91e-07;1!UBERON:0000101;2.91e-07;1!UBERON:0002167;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.67e-09,3;UBERON:0004854,3.67e-09,3;UBERON:0009034,3.67e-09,3;UBERON:0002095,3.67e-09,3;UBERON:0004782,3.67e-09,3;UBERON:0003281,3.67e-09,3;UBERON:0009664,3.67e-09,3;UBERON:0002296,3.67e-09,3;UBERON:0005602,3.67e-09,3;UBERON:0001179,3.67e-09,3;UBERON:0006293,3.67e-09,3;UBERON:0004177,2.19e-08,7;UBERON:0005057,2.19e-08,7;UBERON:0002171,2.35e-07,1;UBERON:0006518,2.35e-07,1;UBERON:0008949,2.35e-07,1;UBERON:0000101,2.35e-07,1;UBERON:0002167,2.35e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0,0,0.570025487482497,0,0,3.51992488922645,1.09227722252426,0.889509253863555,0.426730222566507,2.40237592221607,2.87376219977242,0,0.954053754535364,1.70763890732835,0.587237189370939,1.52909291250092,0,0,0,0.590129310341499,0.786021525498329,0.205601498999509,12.7061736496915,1.30368906653436,1.4203434172042,0,2.00538822393312,1.76763544484902,0.886135578334485,0.270803863765016,1.92136979588513,2.08094956095805,0.822189523018381,1.65810010671509,2.02862160014537,1.18629250529648,1.33770414044857,0,5.55215779218074,1.53288197440768,0.34362744548263,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0.79504962946682,0,4.51282652089873,0,0.419499436209906,0,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0.337834441449967,0,0.949265659568129,2.74802615895611,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,2.80483547606892,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0,0.445160178233687,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,4.69536166099533,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,1.20390222730132,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.236349546921671,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.06787412567695,0.314408610199332,1.65695622138878,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34109717480496,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,2.53756578545605,1.61144719933943,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.452122368852043,0.558672428662721,0.224263725161227,0,0,0,0.342233301085281,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0,0,0.570025487482497,0,0,3.51992488922645,1.09227722252426,0.889509253863555,0.426730222566507,2.40237592221607,2.87376219977242,0,0.954053754535364,1.70763890732835,0.587237189370939,1.52909291250092,0,0,0,0.590129310341499,0.786021525498329,0.205601498999509,12.7061736496915,1.30368906653436,1.4203434172042,0,2.00538822393312,1.76763544484902,0.886135578334485,0.270803863765016,1.92136979588513,2.08094956095805,0.822189523018381,1.65810010671509,2.02862160014537,1.18629250529648,1.33770414044857,0,5.55215779218074,1.53288197440768,0.34362744548263,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0.79504962946682,0,4.51282652089873,0,0.419499436209906,0,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0.337834441449967,0,0.949265659568129,2.74802615895611,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,2.80483547606892,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0,0.445160178233687,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,4.69536166099533,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,1.20390222730132,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.236349546921671,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.06787412567695,0.314408610199332,1.65695622138878,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34109717480496,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,2.53756578545605,1.61144719933943,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.452122368852043,0.558672428662721,0.224263725161227,0,0,0,0.342233301085281,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p17@LIMS2 | |short_description=p17@LIMS2 | ||
}} | }} |
Latest revision as of 20:53, 16 September 2015
Short description: | p17@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 1.53e-18 | 3 |
B cell | 2.84e-15 | 14 |
regulatory T cell | 5.88e-13 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.88e-13 | 2 |
naive regulatory T cell | 5.88e-13 | 2 |
lymphoid lineage restricted progenitor cell | 3.52e-12 | 52 |
lymphocyte | 6.53e-12 | 53 |
common lymphoid progenitor | 6.53e-12 | 53 |
CD4-positive, alpha-beta T cell | 1.54e-09 | 6 |
lymphocyte of B lineage | 1.11e-08 | 24 |
pro-B cell | 1.11e-08 | 24 |
CD4-positive, alpha-beta thymocyte | 2.66e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.66e-07 | 1 |
mature CD4 single-positive thymocyte | 2.66e-07 | 1 |
resting double-positive thymocyte | 2.66e-07 | 1 |
double-positive blast | 2.66e-07 | 1 |
CD69-positive double-positive thymocyte | 2.66e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.66e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.66e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.67e-09 | 3 |
gastrointestinal system mesentery | 3.67e-09 | 3 |
stomach region | 3.67e-09 | 3 |
mesentery | 3.67e-09 | 3 |
gastrointestinal system serosa | 3.67e-09 | 3 |
mesentery of stomach | 3.67e-09 | 3 |
gut mesentery | 3.67e-09 | 3 |
dorsal mesentery | 3.67e-09 | 3 |
dorsal mesogastrium | 3.67e-09 | 3 |
peritoneal cavity | 3.67e-09 | 3 |
spleen primordium | 3.67e-09 | 3 |
hemopoietic organ | 2.19e-08 | 7 |
immune organ | 2.19e-08 | 7 |
lower lobe of right lung | 2.35e-07 | 1 |
right lung lobe | 2.35e-07 | 1 |
lower lobe of lung | 2.35e-07 | 1 |
lobe of lung | 2.35e-07 | 1 |
right lung | 2.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.09e-07 | 1 |