FFCP PHASE1:Hg19::chr5:16936308..16936319,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:16936308..16936319,- to FFCP PHASE1:Hg19::chr5:16936308..16936319,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4651 | |EntrezGene=4651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7593 | |HGNC=7593 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVX5 | |UniProt=Q8IVX5 | ||
|association_with_transcript=48bp_to_ENST00000507288_5end | |||
|cluster_id=chr5:16936308..16936319,- | |||
|description=CAGE_peak_7_at_MYO10_5end | |||
|id=chr5:16936308..16936319,- | |||
|ontology_enrichment_celltype=CL:0000220!1.98e-21!246;CL:0002321!4.19e-21!248;CL:0000055!5.57e-19!180;CL:0000222!3.35e-14!119;CL:0000192!1.68e-13!42;CL:0000514!1.68e-13!42;CL:0000359!2.27e-13!32;CL:0000680!6.10e-12!57;CL:0000056!6.10e-12!57;CL:0000355!6.10e-12!57;CL:0000066!2.44e-11!254;CL:0000187!2.93e-11!54;CL:0000183!1.12e-10!59;CL:0000393!5.32e-10!60;CL:0000211!5.32e-10!60;CL:0000548!5.66e-10!679;CL:0000004!5.66e-10!679;CL:0000255!5.66e-10!679;CL:0000071!1.42e-09!18;CL:0002546!1.42e-09!18;CL:0000012!1.95e-09!682;CL:0002139!2.67e-09!24;CL:0000115!6.89e-07!35;CL:0000057!7.44e-07!75;CL:0000076!8.65e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.53e-17;32!CL:0000192;4.88e-14;43!CL:0002139;6.79e-11;24!CL:0000071;1.95e-10;18!CL:0000187;7.15e-08;55!CL:0000115;7.68e-08;36!CL:0002543;2.95e-07;6!CL:0000148;4.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.55e-19,43;CL:0000514,3.55e-19,43;CL:0002321,1.12e-18,250;CL:0000359,4.46e-18,32;CL:0000222,1.24e-17,121;CL:0000187,3.36e-14,55;CL:0000680,5.49e-13,58;CL:0000056,5.49e-13,58;CL:0000355,5.49e-13,58;CL:0000393,6.66e-12,61;CL:0000211,6.66e-12,61;CL:0002139,1.04e-11,24;CL:0000071,2.63e-11,18;CL:0002546,2.63e-11,18;CL:0000115,2.30e-09,36;CL:0002078,3.37e-08,45;CL:0002543,1.00e-07,6;CL:0000148,4.20e-07,10;CL:0000541,4.20e-07,10;CL:0002368,9.97e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;4.88e-14;43!CL:0002546;1.95e-10;18!CL:0000355;1.20e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!5.60e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.05e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.10e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.05e-21!79;UBERON:0007798!5.05e-21!79;UBERON:0001981!2.02e-19!60;UBERON:0007500!2.02e-19!60;UBERON:0004537!2.02e-19!60;UBERON:0006965!2.02e-19!60;UBERON:0000055!2.07e-18!69;UBERON:0001637!9.13e-18!42;UBERON:0003509!9.13e-18!42;UBERON:0004572!9.13e-18!42;UBERON:0000490!1.28e-17!138;UBERON:0004872!1.78e-16!84;UBERON:0004573!9.73e-15!33;UBERON:0004571!9.73e-15!33;UBERON:0004535!1.56e-14!110;UBERON:0001009!8.63e-14!113;UBERON:0003914!1.31e-13!118;UBERON:0001134!1.12e-11!61;UBERON:0002036!1.12e-11!61;UBERON:0003082!1.12e-11!61;UBERON:0000486!1.51e-11!82;UBERON:0002385!3.02e-11!63;UBERON:0001015!3.02e-11!63;UBERON:0000383!3.02e-11!63;UBERON:0002100!5.26e-11!216;UBERON:0004290!3.16e-10!70;UBERON:0000119!1.06e-09!312;UBERON:0000483!1.32e-09!309;UBERON:0001986!1.42e-09!18;UBERON:0004638!1.42e-09!18;UBERON:0004852!1.42e-09!18;UBERON:0000947!4.73e-09!21;UBERON:0010191!4.73e-09!21;UBERON:0000914!5.92e-09!83;UBERON:0002329!5.92e-09!83;UBERON:0003077!5.92e-09!83;UBERON:0003059!5.92e-09!83;UBERON:0007282!5.92e-09!83;UBERON:0009618!5.92e-09!83;UBERON:0007285!5.92e-09!83;UBERON:0000487!9.63e-09!22;UBERON:0000467!2.00e-08!625;UBERON:0000468!2.85e-08!659;UBERON:0000480!2.89e-08!626;UBERON:0003104!9.03e-08!238;UBERON:0009142!9.03e-08!238;UBERON:0006914!1.00e-07!25;UBERON:0005256!3.18e-07!143;UBERON:0000475!4.49e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.74e-19;33!UBERON:0004571;4.74e-19;33!UBERON:0001637;3.07e-18;42!UBERON:0003509;3.07e-18;42!UBERON:0004572;3.07e-18;42!UBERON:0007500;7.22e-17;56!UBERON:0001981;7.22e-17;56!UBERON:0004537;7.22e-17;56!UBERON:0000055;8.23e-14;65!UBERON:0000947;1.79e-12;21!UBERON:0010191;1.79e-12;21!UBERON:0004638;1.95e-10;18!UBERON:0001986;1.95e-10;18!UBERON:0004852;1.95e-10;18!UBERON:0002049;3.15e-10;75!UBERON:0007798;3.15e-10;75!UBERON:0003914;1.14e-09;74!UBERON:0000487;3.84e-09;22!UBERON:0000490;4.62e-09;33!UBERON:0000025;1.98e-08;93!UBERON:0006914;1.38e-07;25 | |||
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| ||
|short_description=p7@MYO10 | |||
}} | }} |
Latest revision as of 20:50, 16 September 2015
Short description: | p7@MYO10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MYO10_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000507288_5end |
EntrezGene: | MYO10 |
HGNC: | 7593 |
UniProt: | Q8IVX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.55e-19 | 43 |
smooth muscle myoblast | 3.55e-19 | 43 |
embryonic cell | 1.12e-18 | 250 |
vascular associated smooth muscle cell | 4.46e-18 | 32 |
mesodermal cell | 1.24e-17 | 121 |
muscle cell | 3.36e-14 | 55 |
muscle precursor cell | 5.49e-13 | 58 |
myoblast | 5.49e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-13 | 58 |
electrically responsive cell | 6.66e-12 | 61 |
electrically active cell | 6.66e-12 | 61 |
endothelial cell of vascular tree | 1.04e-11 | 24 |
blood vessel endothelial cell | 2.63e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.63e-11 | 18 |
endothelial cell | 2.30e-09 | 36 |
meso-epithelial cell | 3.37e-08 | 45 |
vein endothelial cell | 1.00e-07 | 6 |
melanocyte | 4.20e-07 | 10 |
melanoblast | 4.20e-07 | 10 |
respiratory epithelial cell | 9.97e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.10e-09 | 14 |