FFCP PHASE1:Hg19::chr3:178968900..178968909,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6287 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPA1 | |||
|association_with_transcript=493bp_to_ENST00000314235,NM_014407,uc003fjm.2_5end | |||
|cluster_id=chr3:178968900..178968909,- | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_5_at_KCNMB3_5end | |||
|id=chr3:178968900..178968909,- | |||
|ontology_enrichment_celltype=CL:0000181!9.88e-46!12;CL:0000417!9.88e-46!12;CL:0000668!9.88e-46!12;CL:0000414!9.88e-46!12;CL:0000412!9.88e-46!12;CL:0000182!9.88e-46!12;CL:0000223!4.13e-18!59;CL:0002231!1.40e-08!3;CL:0002563!8.61e-07!4;CL:0000066!9.49e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.74e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.74e-23,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.09e-10;30!UBERON:0004161;2.55e-07;11 | |||
|ontology_enrichment_disease=DOID:7!2.74e-14!39;DOID:305!1.75e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!7.03e-36!22;UBERON:0003894!7.03e-36!22;UBERON:0009854!2.49e-34!23;UBERON:0007499!1.33e-31!25;UBERON:0009497!1.33e-31!25;UBERON:0000015!1.33e-31!25;UBERON:0002423!1.33e-31!25;UBERON:0006235!1.33e-31!25;UBERON:0004161!1.33e-31!25;UBERON:0009856!2.14e-30!26;UBERON:0002107!4.84e-29!19;UBERON:0006925!4.84e-29!19;UBERON:0008836!4.84e-29!19;UBERON:0003929!8.66e-26!54;UBERON:0005911!1.65e-21!82;UBERON:0005057!2.57e-21!26;UBERON:0002365!6.31e-18!31;UBERON:0002330!6.31e-18!31;UBERON:0002368!6.59e-16!35;UBERON:0004921!1.66e-13!129;UBERON:0004185!1.66e-13!129;UBERON:0002530!2.03e-13!59;UBERON:0000949!2.01e-12!45;UBERON:0001007!3.26e-11!155;UBERON:0001555!3.26e-11!155;UBERON:0007026!3.26e-11!155;UBERON:0001041!6.31e-11!98;UBERON:0000077!1.19e-10!130;UBERON:0004119!2.89e-10!169;UBERON:0000925!2.89e-10!169;UBERON:0006595!2.89e-10!169;UBERON:0005172!3.40e-10!55;UBERON:0005173!3.40e-10!55;UBERON:0000490!5.44e-10!138;UBERON:0002417!3.31e-09!61;UBERON:0000916!3.31e-09!61;UBERON:0000466!1.86e-08!126;UBERON:0005177!2.04e-07!107;UBERON:0005256!2.17e-07!143;UBERON:0009569!5.12e-07!113;UBERON:0002394!7.70e-07!4;UBERON:0003928!7.70e-07!4;UBERON:0001242!8.61e-07!4;UBERON:0001262!8.61e-07!4;UBERON:0004786!8.61e-07!4;UBERON:0004808!8.61e-07!4;UBERON:0001277!8.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.66e-15;19!UBERON:0006925;5.66e-15;19!UBERON:0002423;1.15e-11;25!UBERON:0002365;6.52e-10;31!UBERON:0002330;6.52e-10;31!UBERON:0002368;2.91e-09;33!UBERON:0005172;8.14e-07;52!UBERON:0005173;8.14e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.66e-15,19;UBERON:0006925,5.66e-15,19;UBERON:0008836,5.66e-15,19;UBERON:0008835,4.26e-13,22;UBERON:0003894,4.26e-13,22;UBERON:0009854,1.41e-12,23;UBERON:0007499,1.15e-11,25;UBERON:0009497,1.15e-11,25;UBERON:0000015,1.15e-11,25;UBERON:0002423,1.15e-11,25;UBERON:0006235,1.15e-11,25;UBERON:0004161,1.15e-11,25;UBERON:0009856,2.91e-11,26;UBERON:0002365,1.25e-09,31;UBERON:0002330,1.25e-09,31;UBERON:0002368,1.18e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0000949,5.75e-07,45;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.13480708770837,1.47641222272123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79043146076122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@KCNMB3 | |||
}} |
Latest revision as of 20:45, 16 September 2015
Short description: | p5@KCNMB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNMB3_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 493bp_to_ENST00000314235, NM_014407, uc003fjm.2_5end |
EntrezGene: | KCNMB3 |
HGNC: | 6287 |
UniProt: | Q9NPA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.74e-23 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.66e-15 | 19 |
digestive gland | 5.66e-15 | 19 |
liver bud | 5.66e-15 | 19 |
hepatic diverticulum | 4.26e-13 | 22 |
liver primordium | 4.26e-13 | 22 |
digestive tract diverticulum | 1.41e-12 | 23 |
epithelial sac | 1.15e-11 | 25 |
epithelium of foregut-midgut junction | 1.15e-11 | 25 |
anatomical boundary | 1.15e-11 | 25 |
hepatobiliary system | 1.15e-11 | 25 |
foregut-midgut junction | 1.15e-11 | 25 |
septum transversum | 1.15e-11 | 25 |
sac | 2.91e-11 | 26 |
exocrine gland | 1.25e-09 | 31 |
exocrine system | 1.25e-09 | 31 |
endocrine gland | 1.18e-08 | 35 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
endocrine system | 5.75e-07 | 45 |
trunk region element | 6.45e-07 | 101 |