FFCP PHASE1:Hg19::chr1:24434922..24434942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=127294 | |EntrezGene=127294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26679 | |HGNC=26679 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZU56 | |UniProt=Q6ZU56 | ||
|association_with_transcript=0bp_to_ENST00000475306,uc001bip.1_5end | |association_with_transcript=0bp_to_ENST00000475306,uc001bip.1_5end | ||
|cluster_id=chr1:24434922..24434942,- | |||
|description=CAGE_peak_2_at_MYOM3_5end | |description=CAGE_peak_2_at_MYOM3_5end | ||
|id=chr1:24434922..24434942,- | |id=chr1:24434922..24434942,- | ||
|ontology_enrichment_celltype=CL:1000497!5.00e-09!18;CL:0002518!5.00e-09!18;CL:1000507!6.24e-08!12;CL:1000494!6.24e-08!12 | |ontology_enrichment_celltype=CL:1000497!5.00e-09!18;CL:0002518!5.00e-09!18;CL:1000507!6.24e-08!12;CL:1000494!6.24e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.12e-10;12!CL:0002379;7.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.22e-10,12;CL:0002379,4.91e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.43e-15;31!UBERON:0003918;1.19e-12;10!UBERON:0007687;1.19e-12;10!UBERON:0001041;8.44e-12;30!UBERON:0004161;1.23e-11;11!UBERON:0009497;7.22e-10;13 | |||
|ontology_enrichment_disease=DOID:305!6.24e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3620;7.26e-09;1!DOID:3565;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.91e-09,1;DOID:3565,4.91e-09,1;DOID:305,6.52e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002113!5.73e-13!27;UBERON:0003918!5.73e-13!27;UBERON:0005095!5.73e-13!27;UBERON:0007687!5.73e-13!27;UBERON:0005172!2.45e-11!55;UBERON:0005173!2.45e-11!55;UBERON:0000489!1.64e-10!32;UBERON:0002417!8.25e-10!61;UBERON:0000916!8.25e-10!61;UBERON:0006554!1.49e-09!44;UBERON:0001008!2.87e-09!45;UBERON:0009773!6.24e-08!12;UBERON:0001231!6.24e-08!12;UBERON:0004810!6.24e-08!12;UBERON:0005177!9.01e-08!107;UBERON:0005409!1.85e-07!35;UBERON:0006555!2.74e-07!17;UBERON:0005103!2.74e-07!17;UBERON:0000083!2.74e-07!17;UBERON:0009201!2.74e-07!17;UBERON:0004819!2.74e-07!17;UBERON:0006553!2.74e-07!17;UBERON:0003074!2.74e-07!17;UBERON:0003060!2.74e-07!17;UBERON:0000080!7.95e-07!18;UBERON:0002120!7.95e-07!18;UBERON:0004875!7.95e-07!18;UBERON:0005721!7.95e-07!18;UBERON:0005754!7.95e-07!18;UBERON:0007297!7.95e-07!18;UBERON:0000160!9.36e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;7.26e-09;1!UBERON:0002113;6.06e-08;24!UBERON:0011143;6.06e-08;24!UBERON:0005172;2.62e-07;52!UBERON:0005173;2.62e-07;52!UBERON:0002417;4.12e-07;58!UBERON:0000916;4.12e-07;58!UBERON:0002107;8.74e-07;19!UBERON:0006925;8.74e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.03e-12,54;UBERON:0005173,1.03e-12,54;UBERON:0005177,2.64e-12,101;UBERON:0002417,2.80e-11,60;UBERON:0000916,2.80e-11,60;UBERON:0002113,3.18e-10,26;UBERON:0003918,3.18e-10,26;UBERON:0011143,3.18e-10,26;UBERON:0005095,3.18e-10,26;UBERON:0007687,3.18e-10,26;UBERON:0009569,3.05e-09,112;UBERON:0001301,1.16e-08,1;UBERON:0000489,1.71e-08,31;UBERON:0002107,9.23e-07,19;UBERON:0006925,9.23e-07,19;UBERON:0008836,9.23e-07,19 | |||
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| ||
|short_description=p2@MYOM3 | |short_description=p2@MYOM3 | ||
}} | }} |
Latest revision as of 20:36, 16 September 2015
Short description: | p2@MYOM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475306, uc001bip.1_5end |
EntrezGene: | MYOM3 |
HGNC: | 26679 |
UniProt: | Q6ZU56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.22e-10 | 12 |
meningothelial cell | 4.91e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.03e-12 | 54 |
abdominal segment element | 1.03e-12 | 54 |
trunk region element | 2.64e-12 | 101 |
abdominal segment of trunk | 2.80e-11 | 60 |
abdomen | 2.80e-11 | 60 |
kidney | 3.18e-10 | 26 |
kidney mesenchyme | 3.18e-10 | 26 |
upper urinary tract | 3.18e-10 | 26 |
kidney rudiment | 3.18e-10 | 26 |
kidney field | 3.18e-10 | 26 |
subdivision of trunk | 3.05e-09 | 112 |
epididymis | 1.16e-08 | 1 |
cavitated compound organ | 1.71e-08 | 31 |
liver | 9.23e-07 | 19 |
digestive gland | 9.23e-07 | 19 |
liver bud | 9.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.91e-09 | 1 |
meningioma | 4.91e-09 | 1 |
carcinoma | 6.52e-07 | 106 |