FFCP PHASE1:Hg19::chr2:127839445..127839462,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:127839445..127839462,- to FFCP PHASE1:Hg19::chr2:127839445..127839462,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=274 | |EntrezGene=274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1052 | |HGNC=1052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=178bp_to_uc010yzf.1_5end | |||
|cluster_id=chr2:127839445..127839462,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_5_at_BIN1_5end | |||
|id=chr2:127839445..127839462,- | |||
|ontology_enrichment_celltype=CL:0000542!3.51e-37!53;CL:0000051!3.51e-37!53;CL:0000838!2.29e-36!52;CL:0000738!3.46e-36!140;CL:0002087!3.43e-34!119;CL:0000988!9.26e-30!182;CL:0002031!1.21e-28!124;CL:0000037!1.70e-28!172;CL:0000566!1.70e-28!172;CL:0002032!5.12e-25!165;CL:0000837!5.12e-25!165;CL:0000791!8.60e-21!18;CL:0000789!8.60e-21!18;CL:0002420!8.60e-21!18;CL:0002419!8.60e-21!18;CL:0000790!8.60e-21!18;CL:0000084!3.26e-19!25;CL:0000827!3.26e-19!25;CL:0000945!4.06e-15!24;CL:0000826!4.06e-15!24;CL:0000625!2.94e-13!11;CL:0000236!3.43e-13!14;CL:0000624!3.27e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.13e-32;18!CL:0000789;5.13e-32;18!CL:0002419;5.13e-32;18!CL:0000542;4.52e-29;53!CL:0000084;1.04e-28;25!CL:0000945;1.54e-20;24!CL:0000625;4.72e-20;11!CL:0000236;6.69e-15;13!CL:0000624;4.39e-12;6!CL:0002087;3.92e-11;104!CL:0000738;2.52e-07;136!CL:0000898;5.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.86e-54,53;CL:0000051,1.86e-54,53;CL:0000838,3.58e-53,52;CL:0000738,6.60e-37,136;CL:0002087,5.39e-35,115;CL:0000791,5.15e-32,18;CL:0000789,5.15e-32,18;CL:0002420,5.15e-32,18;CL:0002419,5.15e-32,18;CL:0000790,5.15e-32,18;CL:0000988,2.76e-31,177;CL:0000084,1.07e-28,25;CL:0000827,1.07e-28,25;CL:0000037,2.06e-28,168;CL:0002031,3.12e-27,120;CL:0002032,1.03e-23,161;CL:0000837,1.03e-23,161;CL:0000945,1.66e-20,24;CL:0000826,1.66e-20,24;CL:0000625,4.65e-20,11;CL:0000236,5.11e-16,14;CL:0000624,4.43e-12,6;CL:0000898,5.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.13e-32;18!CL:0000051;4.52e-29;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.62e-14!15;UBERON:0000179!1.62e-14!15;UBERON:0000463!1.62e-14!15;UBERON:0002390!5.35e-12!102;UBERON:0003061!5.35e-12!102;UBERON:0007023!1.18e-11!115;UBERON:0002193!5.49e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.87e-22;15!UBERON:0000179;4.87e-22;15!UBERON:0000463;4.87e-22;15!UBERON:0002390;2.10e-14;32!UBERON:0002193;1.15e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.68e-22,15;UBERON:0000179,4.68e-22,15;UBERON:0000463,4.68e-22,15;UBERON:0002390,5.53e-09,98;UBERON:0003061,5.53e-09,98;UBERON:0002193,8.07e-09,108;UBERON:0004177,1.74e-08,7;UBERON:0005057,1.74e-08,7;UBERON:0002370,1.64e-07,4;UBERON:0005058,1.64e-07,4;UBERON:0009113,1.64e-07,4;UBERON:0003295,1.64e-07,4;UBERON:0005562,1.64e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,6.265899271332,5.50073949314637,7.08397031823113,13.3743854128627,22.6459344877355,6.50227717927519,0,0,0,0,0,9.39521405871511,4.9859586767869,8.02177789880567,15.8417935622572,0.671746422719773,4.21061765824673,2.06060454107349,0,1.13362783106643,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0,1.70215567407342,0,1.00499466102697,0.521482918420201,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,31.6793240030381,39.8681186221356,24.016749854316,21.7632413508919,28.4281150795569,33.9103939573145,42.967916731016,41.0243114450207,19.9224539188307,38.757654498482,33.6400440750201,9.25199300053181,26.9044110231137,4.21414535640123,50.3577011491413,48.7333345808964,52.8395852428739,46.3106592232178,57.0363966608783,51.1323630193512,21.4309401248702,48.9091905725912,56.8589401426436,53.8327363838199,44.9534413849926,37.1464827204458,29.913649938772,21.8702413122889,22.6607014584396,40.2826289171723,46.561980832887,35.0478484797524,41.8142095219907,46.4568305060021,77.79376020119,66.6637244236302,51.6160171719786,57.3417745783374,50.1334259469442,43.7207940446252,40.8058572700764,49.1468586832967,36.2299107001803,54.2219907180799,62.4057277659995,39.5149216720476,51.3485175904334,51.9919609939248,0,0,0,0,0,0,0,0,0,0,0.614843499851882,1.17881167947941,0,0,1.62273696827342,0.174129737299267,0,2.38490624305342,2.85997455390064,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,29.5904780142912,32.9041369537218,47.0068113193748,59.9361979426425,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5377148473947,15.9628508605776,35.9671869797607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56869953835371,0,0.105551628892876,0,0,0.431831832204279,0,1.08378575017541,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0,0,0,0,26.3872756800728,16.0573813499899,19.9376515510957,10.7204298956005,9.46133228098247,27.2358790700941,24.3014146757152,15.8625035258854,0,0,0,7.9895365304059,0.144269212976445,0.0711418433484141,3.34795172730527,0.399158742865633,0,21.8023790205599,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,10.2225048746525,0,0,5.29264663482599,0,0,0,0,0.690503839458535,28.7379710816328,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,7.15353087370155,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,1.50377859655677,1.83309043480088,6.52346483097368,14.0862890399013,11.1731485970837,0.202203398942031,0.802577647298789,0.234264445725339,0.182454789215666,0,0.485560759068186,0,1.20990716048664,0,1.01098527405581,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.969890164884194,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1443677139657,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,3.13291328643403,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,1.49502377594773,0.471612915298998,2.48543433208317,16.3734787197944,6.91640711642805,8.28189668990092,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86097181510904,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0.354809480650555,4.60935950223117,0,0,0,0,0,0.549451649953598,0,0,0,0.215927591218621,0.47775168788705,0.643288897589907,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.69783147837478,1.09279780251979,0,0.245148321753905,0,0,0,0.4226557275834,0,12.0299415014213,11.8602513871382,0,0,0,0,0,5.50475140085449,0.1433395831514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| 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| ||
|short_description=p5@BIN1 | |||
}} | }} |
Latest revision as of 19:59, 16 September 2015
Short description: | p5@BIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BIN1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 178bp_to_uc010yzf.1_5end |
EntrezGene: | BIN1 |
HGNC: | 1052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.86e-54 | 53 |
common lymphoid progenitor | 1.86e-54 | 53 |
lymphoid lineage restricted progenitor cell | 3.58e-53 | 52 |
leukocyte | 6.60e-37 | 136 |
nongranular leukocyte | 5.39e-35 | 115 |
mature alpha-beta T cell | 5.15e-32 | 18 |
alpha-beta T cell | 5.15e-32 | 18 |
immature T cell | 5.15e-32 | 18 |
mature T cell | 5.15e-32 | 18 |
immature alpha-beta T cell | 5.15e-32 | 18 |
hematopoietic cell | 2.76e-31 | 177 |
T cell | 1.07e-28 | 25 |
pro-T cell | 1.07e-28 | 25 |
hematopoietic stem cell | 2.06e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 3.12e-27 | 120 |
hematopoietic oligopotent progenitor cell | 1.03e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-23 | 161 |
lymphocyte of B lineage | 1.66e-20 | 24 |
pro-B cell | 1.66e-20 | 24 |
CD8-positive, alpha-beta T cell | 4.65e-20 | 11 |
B cell | 5.11e-16 | 14 |
CD4-positive, alpha-beta T cell | 4.43e-12 | 6 |
naive T cell | 5.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.68e-22 | 15 |
haemolymphatic fluid | 4.68e-22 | 15 |
organism substance | 4.68e-22 | 15 |
hematopoietic system | 5.53e-09 | 98 |
blood island | 5.53e-09 | 98 |
hemolymphoid system | 8.07e-09 | 108 |
hemopoietic organ | 1.74e-08 | 7 |
immune organ | 1.74e-08 | 7 |
thymus | 1.64e-07 | 4 |
hemolymphoid system gland | 1.64e-07 | 4 |
thymic region | 1.64e-07 | 4 |
pharyngeal gland | 1.64e-07 | 4 |
thymus primordium | 1.64e-07 | 4 |