FFCP PHASE1:Hg19::chr3:174581600..174581648,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473253,uc003fiu.1_5end | |||
|cluster_id=chr3:174581600..174581648,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_5_at_NAALADL2_5end | |||
|id=chr3:174581600..174581648,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.25e-15;5!CL:0000349;1.64e-14;19!CL:0002541;1.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.25e-15,5;CL:0000349,1.54e-14,19;CL:0002541,1.94e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.31e-09;1!UBERON:0003124;2.82e-09;1 | |||
|ontology_enrichment_disease=DOID:5093!2.78e-11!4;DOID:1612!2.78e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.75e-31;4!DOID:1612;1.75e-31;4!DOID:178;3.05e-09;1!DOID:326;3.05e-09;1!DOID:3978;3.05e-09;1!DOID:3394;3.05e-09;1!DOID:5844;3.05e-09;1!DOID:299;1.71e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.33e-31,4;DOID:1612,1.33e-31,4;DOID:178,3.05e-09,1;DOID:326,3.05e-09,1;DOID:3978,3.05e-09,1;DOID:3394,3.05e-09,1;DOID:5844,3.05e-09,1;DOID:299,1.69e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.44e-20!14;UBERON:0000158!3.44e-20!14;UBERON:0003124!9.26e-13!7;UBERON:0000464!4.89e-11!104;UBERON:0000478!1.24e-10!24;UBERON:0001004!7.12e-10!72;UBERON:0000305!3.06e-09!7;UBERON:0004119!7.61e-09!169;UBERON:0000925!7.61e-09!169;UBERON:0006595!7.61e-09!169;UBERON:0000476!2.20e-08!3;UBERON:0000920!2.20e-08!3;UBERON:0000065!2.33e-08!53;UBERON:0004871!5.09e-08!8;UBERON:0000466!7.09e-08!126;UBERON:0000077!1.80e-07!130;UBERON:0004923!5.12e-07!57;UBERON:0000915!5.76e-07!52;UBERON:0001007!8.37e-07!155;UBERON:0001555!8.37e-07!155;UBERON:0007026!8.37e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.11e-20;10!UBERON:0000158;7.11e-20;10!UBERON:0003127;4.07e-16;2!UBERON:0000341;4.07e-16;2!UBERON:0000478;2.38e-15;24!UBERON:0000310;9.65e-13;10!UBERON:0001443;1.34e-11;11!UBERON:0003124;1.99e-11;3!UBERON:0000920;1.99e-11;3!UBERON:0000305;5.14e-11;7!UBERON:0007029;8.49e-09;1!UBERON:0001987;1.25e-08;4!UBERON:0000915;1.88e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.79e-27,14;UBERON:0000158,6.79e-27,14;UBERON:0003124,5.22e-18,7;UBERON:0003127,3.23e-16,2;UBERON:0000341,5.14e-16,2;UBERON:0000478,2.26e-15,24;UBERON:0000310,8.68e-13,10;UBERON:0001443,1.22e-11,11;UBERON:0000920,1.94e-11,3;UBERON:0000305,5.14e-11,7;UBERON:0000915,1.06e-10,52;UBERON:0004871,1.07e-09,8;UBERON:0007029,6.22e-09,1;UBERON:0001987,1.16e-08,4;UBERON:0004340,1.16e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,2.31046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.8934777876024,33.2600442532555,77.0973362269073,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3133653646482,18.0167599992163,0,0,3.0510438035132,9.45550727071745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5020672644513,0.274792780205587,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.721429382263803,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,5.79069101447074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,7.80580857431222,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,1.14553434272025,0,0,0.111855431797792,0,0,0,0,0,1.94284397223656,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,1.0661699095049,2.85677317756488,0.0645889098360061,0.186224142887574,0,0,0,0.217716747896961,1.36893320434112,0.336760265072938,1.57788851863888,2.99394320891412,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@NAALADL2 | |||
}} |
Latest revision as of 19:17, 16 September 2015
Short description: | p5@NAALADL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NAALADL2_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000473253, uc003fiu.1_5end |
EntrezGene: | NAALADL2 |
HGNC: | 23219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.25e-15 | 5 |
extraembryonic cell | 1.54e-14 | 19 |
chorionic membrane mesenchymal stem cell | 1.94e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.79e-27 | 14 |
membranous layer | 6.79e-27 | 14 |
chorion | 5.22e-18 | 7 |
open tracheal system trachea | 3.23e-16 | 2 |
throat | 5.14e-16 | 2 |
extraembryonic structure | 2.26e-15 | 24 |
breast | 8.68e-13 | 10 |
chest | 1.22e-11 | 11 |
egg chorion | 1.94e-11 | 3 |
amnion | 5.14e-11 | 7 |
thoracic segment of trunk | 1.06e-10 | 52 |
somatic layer of lateral plate mesoderm | 1.07e-09 | 8 |
surface | 6.22e-09 | 1 |
placenta | 1.16e-08 | 4 |
allantois | 1.16e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.33e-31 | 4 |
breast cancer | 1.33e-31 | 4 |
vascular disease | 3.05e-09 | 1 |
ischemia | 3.05e-09 | 1 |
extrinsic cardiomyopathy | 3.05e-09 | 1 |
myocardial ischemia | 3.05e-09 | 1 |
myocardial infarction | 3.05e-09 | 1 |
adenocarcinoma | 1.69e-07 | 25 |