FFCP PHASE1:Hg19::chr9:15472730..15472753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11168 | |EntrezGene=11168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9527 | |HGNC=9527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481862_5end | |association_with_transcript=0bp_to_ENST00000481862_5end | ||
|cluster_id=chr9:15472730..15472753,- | |||
|description=CAGE_peak_5_at_PSIP1_5end | |description=CAGE_peak_5_at_PSIP1_5end | ||
|id=chr9:15472730..15472753,- | |id=chr9:15472730..15472753,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.04e-08;5!CL:0000540;1.02e-07;6!CL:0000404;1.02e-07;6!CL:0002319;1.89e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.06e-08,5;CL:0000540,6.80e-08,6;CL:0000031,6.80e-08,6;CL:0000404,6.80e-08,6;CL:0000047,9.06e-08,8;CL:0002319,1.52e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.02e-07;6 | |||
|ontology_enrichment_disease=DOID:162!1.82e-12!235;DOID:14566!2.48e-12!239;DOID:0050687!5.53e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.28e-10!82;UBERON:0005743!4.75e-10!86;UBERON:0000073!6.70e-10!94;UBERON:0001016!6.70e-10!94;UBERON:0001049!3.55e-08!57;UBERON:0005068!3.55e-08!57;UBERON:0006241!3.55e-08!57;UBERON:0007135!3.55e-08!57;UBERON:0002780!4.26e-08!41;UBERON:0001890!4.26e-08!41;UBERON:0006240!4.26e-08!41;UBERON:0002791!9.96e-08!33;UBERON:0002020!1.35e-07!34;UBERON:0003528!1.35e-07!34;UBERON:0003080!1.46e-07!42;UBERON:0001869!3.16e-07!32;UBERON:0001893!3.83e-07!34;UBERON:0000955!4.91e-07!69;UBERON:0006238!4.91e-07!69;UBERON:0002616!4.98e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;9.32e-11;32!UBERON:0001869;2.14e-10;32!UBERON:0000956;7.01e-10;25!UBERON:0000203;7.01e-10;25!UBERON:0003528;2.18e-09;34!UBERON:0002020;2.18e-09;34!UBERON:0001893;4.55e-09;34!UBERON:0002780;2.70e-07;41!UBERON:0001890;2.70e-07;41!UBERON:0002619;2.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,1.89e-11,32;UBERON:0001869,1.89e-11,32;UBERON:0001017,3.36e-11,81;UBERON:0003528,1.66e-10,34;UBERON:0002020,1.66e-10,34;UBERON:0001893,1.66e-10,34;UBERON:0000956,1.78e-10,25;UBERON:0000203,1.78e-10,25;UBERON:0001016,4.92e-10,89;UBERON:0002780,5.12e-10,41;UBERON:0001890,5.12e-10,41;UBERON:0003080,5.12e-10,41;UBERON:0006240,5.12e-10,41;UBERON:0001049,1.30e-09,56;UBERON:0005068,1.30e-09,56;UBERON:0006241,1.30e-09,56;UBERON:0007135,1.30e-09,56;UBERON:0000073,1.57e-09,53;UBERON:0002616,1.57e-09,53;UBERON:0002619,7.41e-08,22;UBERON:0000955,1.21e-07,68;UBERON:0006238,1.21e-07,68;UBERON:0002346,2.04e-07,86 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0.123121058076788,0.204000691244253,0,1.43117993565528,1.09499540058307,1.25542639594803,2.9801228241701,1.64201178899891,3.30585281517453,0,0,0.154816123316076,0,0,0,0.774672005803016,0.568676929949686,0,0.553995408531877,0.601633342410425,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.300353785683013,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,1.76171156811282,0,0,0,0.263384084775077,0.196709770113833,2.35806457649499,2.67281948699362,0,0.651844533267181,0,0,0,0.589211814949674,0.221533894583621,0.270803863765016,1.0247305578054,1.56071217071854,0.986627427622057,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0,0.76791966692651,0,0,0,0,0.534880391567015,0.868946423296794,0,2.01210257911091,0.12786256184353,1.0843174571537,0.50133791063589,0.869079113764942,0,0,0.567208902984407,0.443458794925128,1.05401742831751,0,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,1.77334191099179,0,0,0,0,0.269421344139376,0.326923806226917,0.454072282934794,0.576175924479999,0,0,0,0.896692083310806,0.587172493218824,0,0.561803226808994,0,0.859840221182376,0.103325781175765,0,0.989067717114227,0,0,0.168336113954066,0.750711119231785,0,0,0.612975591598039,0.45071417671979,0.226864366320042,1.25572744982203,0,0,0,1.03052529238439,1.03056216018252,0.37223371266318,0.675105328965065,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.806016785821122,0.847802961552438,0,0,0,3.29329006549908,1.06023814657188,2.20768491452085,1.7622379352613,2.77552935963191,4.37972830890996,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.946454400318751,1.01150814046861,0.482022059766964,1.10293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,1.15424147083917,0,0,0,0,0,0,1.18157981336281,1.32438929824395,0.245976877086227,0.514703430895577,0.109750285408626,0,0.502644862058154,0.370353780634118,0,0,0,0.579652024875384,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.626909658919938,0.871901815541886,0,0,0,0,0,0.25248486685276,0.507983154337352,0,0,0,0.616964956219941,0,0.571652865261156,0,0,0.51336800074665,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.899756920638513,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.672510863961164,0.197030760201927,0.862510299438069,0.513372145118994,0.76228387266739,1.30139853857622,1.54657762555539,0.502548796003046,3.82763250991898,0,0,0,0.49076596687656,0,0.542530047399471,0.207970861530807,1.07057393278297,0.630809660135739,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0.280660094433074,0,1.02341449813341,0,0,1.3878872442239,0.355123450626254,0.0821271560138091,0,0.464841513839837,0.483437798366489,0,0.184161977871793,0.229628896329213,1.27463817604702,0.393373244878272,0,0.385076685522074,0,0,0.316654886678627,0,0.170093705276516,1.0795795805107,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.438519753291869,0.261435451024901,0.769350375349168,0,0.325378394664303,0.206082023295445,1.00726411300178,0.330037999682352,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.751941714077915,0.725083469571143,0.426133137080504,0.267096106940212,0,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0.744316738719335,0,0,0,0.855877976067841,0,0,0,0.54907405947211,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.717056761020258,0,0,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0,1.58625035258854,0.747768497892312,0.962479855263359,0,0.371606350251437,1.00988449083511,0.426851060090485,1.75368900001705,1.99579371432817,0.383010740264733,0.846694330895531,0.649243880549111,1.12318871245384,0.228234679033192,0.156679895773023,0,2.53937666702405,1.2847046008296,1.41259795033733,0,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,1.36771666781428,1.39203086947621,0,0,0,0,0,0.293016358543788,0.121360521749513,0.445773537109913,0.284136146806413,0,0.296964680832639,0,1.9882952955326,1.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| ||
|short_description=p5@PSIP1 | |short_description=p5@PSIP1 | ||
}} | }} |
Latest revision as of 19:11, 16 September 2015
Short description: | p5@PSIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PSIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481862_5end |
EntrezGene: | PSIP1 |
HGNC: | 9527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.06e-08 | 5 |
neuron | 6.80e-08 | 6 |
neuroblast | 6.80e-08 | 6 |
electrically signaling cell | 6.80e-08 | 6 |
neuronal stem cell | 9.06e-08 | 8 |
neural cell | 1.52e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 1.89e-11 | 32 |
cerebral hemisphere | 1.89e-11 | 32 |
central nervous system | 3.36e-11 | 81 |
brain grey matter | 1.66e-10 | 34 |
gray matter | 1.66e-10 | 34 |
telencephalon | 1.66e-10 | 34 |
cerebral cortex | 1.78e-10 | 25 |
pallium | 1.78e-10 | 25 |
nervous system | 4.92e-10 | 89 |
regional part of forebrain | 5.12e-10 | 41 |
forebrain | 5.12e-10 | 41 |
anterior neural tube | 5.12e-10 | 41 |
future forebrain | 5.12e-10 | 41 |
neural tube | 1.30e-09 | 56 |
neural rod | 1.30e-09 | 56 |
future spinal cord | 1.30e-09 | 56 |
neural keel | 1.30e-09 | 56 |
regional part of nervous system | 1.57e-09 | 53 |
regional part of brain | 1.57e-09 | 53 |
regional part of cerebral cortex | 7.41e-08 | 22 |
brain | 1.21e-07 | 68 |
future brain | 1.21e-07 | 68 |
neurectoderm | 2.04e-07 | 86 |