FFCP PHASE1:Hg19::chr1:24306809..24306828,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505793,10772 | |EntrezGene=100505793,10772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16713 | |HGNC=16713 | ||
|TSSclassifier=strong | |||
|UniProt=O75494 | |UniProt=O75494 | ||
|association_with_transcript=0bp_to_ENST00000343255,ENST00000473858,ENST00000485292,ENST00000492112,uc001bij.1,uc010oee.1,uc010oef.1_5end | |association_with_transcript=0bp_to_ENST00000343255,ENST00000473858,ENST00000485292,ENST00000492112,uc001bij.1,uc010oee.1,uc010oef.1_5end | ||
|cluster_id=chr1:24306809..24306828,- | |||
|coexpression_cluster_id=C3956 | |coexpression_cluster_id=C3956 | ||
|description=CAGE_peak_1_at_SRSF10_5end | |description=CAGE_peak_1_at_SRSF10_5end | ||
|id=chr1:24306809..24306828,- | |id=chr1:24306809..24306828,- | ||
|ontology_enrichment_celltype=CL:0000037!1.32e-33!172;CL:0000566!1.32e-33!172;CL:0000988!7.08e-31!182;CL:0002032!2.21e-30!165;CL:0000837!2.21e-30!165;CL:0000542!8.16e-24!53;CL:0000051!8.16e-24!53;CL:0000838!3.35e-23!52;CL:0000738!1.58e-21!140;CL:0002031!3.74e-19!124;CL:0002087!6.69e-19!119;CL:0000945!9.60e-12!24;CL:0000826!9.60e-12!24;CL:0000084!2.84e-11!25;CL:0000827!2.84e-11!25;CL:0000763!2.37e-10!112;CL:0000049!2.37e-10!112;CL:0000219!4.34e-09!390;CL:0000791!1.00e-08!18;CL:0000789!1.00e-08!18;CL:0002420!1.00e-08!18;CL:0002419!1.00e-08!18;CL:0000790!1.00e-08!18;CL:0000236!9.26e-08!14;CL:0000134!2.77e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.32e-33!172;CL:0000566!1.32e-33!172;CL:0000988!7.08e-31!182;CL:0002032!2.21e-30!165;CL:0000837!2.21e-30!165;CL:0000542!8.16e-24!53;CL:0000051!8.16e-24!53;CL:0000838!3.35e-23!52;CL:0000738!1.58e-21!140;CL:0002031!3.74e-19!124;CL:0002087!6.69e-19!119;CL:0000945!9.60e-12!24;CL:0000826!9.60e-12!24;CL:0000084!2.84e-11!25;CL:0000827!2.84e-11!25;CL:0000763!2.37e-10!112;CL:0000049!2.37e-10!112;CL:0000219!4.34e-09!390;CL:0000791!1.00e-08!18;CL:0000789!1.00e-08!18;CL:0002420!1.00e-08!18;CL:0002419!1.00e-08!18;CL:0000790!1.00e-08!18;CL:0000236!9.26e-08!14;CL:0000134!2.77e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.80e-14;53!CL:0000945;1.00e-11;24!CL:0000084;2.93e-11;25!CL:0000791;1.04e-08;18!CL:0000789;1.04e-08;18!CL:0002419;1.04e-08;18!CL:0000236;2.79e-07;13!CL:0002087;3.10e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.00e-33,168;CL:0000988,7.26e-31,177;CL:0002032,1.12e-29,161;CL:0000837,1.12e-29,161;CL:0000542,8.16e-24,53;CL:0000051,8.16e-24,53;CL:0000838,3.35e-23,52;CL:0000738,6.95e-21,136;CL:0002031,1.55e-18,120;CL:0002087,2.73e-18,115;CL:0000945,9.60e-12,24;CL:0000826,9.60e-12,24;CL:0000084,2.84e-11,25;CL:0000827,2.84e-11,25;CL:0000763,8.19e-10,108;CL:0000049,8.19e-10,108;CL:0000219,9.44e-09,386;CL:0000791,1.00e-08,18;CL:0000789,1.00e-08,18;CL:0002420,1.00e-08,18;CL:0002419,1.00e-08,18;CL:0000790,1.00e-08,18;CL:0000236,9.26e-08,14;CL:0000134,5.45e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;6.80e-14;53!CL:0000790;1.04e-08;18 | |||
|ontology_enrichment_disease=DOID:162!2.24e-28!235;DOID:14566!2.69e-26!239;DOID:2531!1.09e-18!51;DOID:0060083!1.09e-18!51;DOID:0050686!2.82e-18!137;DOID:1240!3.47e-15!39;DOID:0050687!1.22e-13!143;DOID:305!5.93e-12!106;DOID:8692!4.01e-11!31 | |ontology_enrichment_disease=DOID:162!2.24e-28!235;DOID:14566!2.69e-26!239;DOID:2531!1.09e-18!51;DOID:0060083!1.09e-18!51;DOID:0050686!2.82e-18!137;DOID:1240!3.47e-15!39;DOID:0050687!1.22e-13!143;DOID:305!5.93e-12!106;DOID:8692!4.01e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.70e-12;39!DOID:2531;1.26e-11;51!DOID:0060083;1.26e-11;51!DOID:8692;6.55e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.24e-28,235;DOID:14566,2.69e-26,239;DOID:2531,1.09e-18,51;DOID:0060083,1.09e-18,51;DOID:0050686,2.82e-18,137;DOID:1240,3.47e-15,39;DOID:0050687,1.22e-13,143;DOID:305,5.93e-12,106;DOID:8692,4.01e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.48e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!4.48e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.75e-07,371 | |||
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318426194,61.869719014524 | ||
|short_description=p1@SRSF10 | |short_description=p1@SRSF10 | ||
}} | }} |
Latest revision as of 19:10, 16 September 2015
Short description: | p1@SRSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF10_5end |
Coexpression cluster: | C3956_Mast_cord_Hodgkin_granulocyte_rhabdomyosarcoma_lymphoma_acute |
Association with transcript: | 0bp_to_ENST00000343255, ENST00000473858, ENST00000485292, ENST00000492112, uc001bij.1, uc010oee.1, uc010oef.1_5end |
EntrezGene: | 100505793,10772 |
HGNC: | 16713 |
UniProt: | O75494 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.00e-33 | 168 |
hematopoietic cell | 7.26e-31 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-29 | 161 |
lymphocyte | 8.16e-24 | 53 |
common lymphoid progenitor | 8.16e-24 | 53 |
lymphoid lineage restricted progenitor cell | 3.35e-23 | 52 |
leukocyte | 6.95e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.55e-18 | 120 |
nongranular leukocyte | 2.73e-18 | 115 |
lymphocyte of B lineage | 9.60e-12 | 24 |
pro-B cell | 9.60e-12 | 24 |
T cell | 2.84e-11 | 25 |
pro-T cell | 2.84e-11 | 25 |
myeloid cell | 8.19e-10 | 108 |
common myeloid progenitor | 8.19e-10 | 108 |
motile cell | 9.44e-09 | 386 |
mature alpha-beta T cell | 1.00e-08 | 18 |
alpha-beta T cell | 1.00e-08 | 18 |
immature T cell | 1.00e-08 | 18 |
mature T cell | 1.00e-08 | 18 |
immature alpha-beta T cell | 1.00e-08 | 18 |
B cell | 9.26e-08 | 14 |
mesenchymal cell | 5.45e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.75e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.24e-28 | 235 |
disease of cellular proliferation | 2.69e-26 | 239 |
hematologic cancer | 1.09e-18 | 51 |
immune system cancer | 1.09e-18 | 51 |
organ system cancer | 2.82e-18 | 137 |
leukemia | 3.47e-15 | 39 |
cell type cancer | 1.22e-13 | 143 |
carcinoma | 5.93e-12 | 106 |
myeloid leukemia | 4.01e-11 | 31 |