FFCP PHASE1:Hg19::chr17:62097927..62098000,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3384 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5345 | |||
|TSSclassifier=strong | |||
|UniProt=P13598,Q6FHE2 | |||
|association_with_transcript=0bp_to_ENST00000412356,ENST00000418105,NM_001099786,NM_001099787,NM_001099788,NM_001099789,uc002jdv.3,uc002jdw.3,uc002jdx.3,uc010ded.2,uc010wpx.1_5end | |||
|cluster_id=chr17:62097927..62098000,- | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_1_at_ICAM2_5end | |||
|id=chr17:62097927..62098000,- | |||
|ontology_enrichment_celltype=CL:0000037!3.59e-42!172;CL:0000566!3.59e-42!172;CL:0000988!6.06e-41!182;CL:0002032!1.89e-39!165;CL:0000837!1.89e-39!165;CL:0000738!1.49e-38!140;CL:0002087!4.32e-37!119;CL:0002031!8.57e-34!124;CL:0000542!4.02e-22!53;CL:0000051!4.02e-22!53;CL:0000838!5.95e-22!52;CL:0002057!3.71e-21!42;CL:0000860!4.05e-18!45;CL:0000763!1.04e-17!112;CL:0000049!1.04e-17!112;CL:0000766!3.79e-16!76;CL:0002194!4.17e-14!63;CL:0000576!4.17e-14!63;CL:0000040!4.17e-14!63;CL:0000559!4.17e-14!63;CL:0000839!9.91e-14!70;CL:0002009!3.14e-13!65;CL:0000557!5.26e-13!71;CL:0002139!2.22e-12!24;CL:0000115!6.06e-12!35;CL:0000084!8.84e-12!25;CL:0000827!8.84e-12!25;CL:0000945!1.77e-10!24;CL:0000826!1.77e-10!24;CL:0000791!3.83e-10!18;CL:0000789!3.83e-10!18;CL:0002420!3.83e-10!18;CL:0002419!3.83e-10!18;CL:0000790!3.83e-10!18;CL:0000071!9.68e-10!18;CL:0002546!9.68e-10!18;CL:0002078!5.14e-09!44;CL:0000236!7.50e-08!14;CL:0000625!7.72e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-16;33!CL:0002057;4.78e-16;33!CL:0000542;5.02e-14;53!CL:0000576;8.84e-14;48!CL:0002087;1.06e-13;104!CL:0002139;3.36e-13;24!CL:0000084;1.51e-12;25!CL:0000115;1.17e-11;36!CL:0000473;2.15e-11;39!CL:0000234;2.15e-11;39!CL:0000945;3.73e-11;24!CL:0000791;9.01e-11;18!CL:0000789;9.01e-11;18!CL:0002419;9.01e-11;18!CL:0000071;2.31e-10;18!CL:0000766;9.75e-10;69!CL:0000738;1.33e-09;136!CL:0000988;1.67e-08;177!CL:0000763;2.30e-08;100!CL:0000236;5.41e-08;13!CL:0002078;2.71e-07;45!CL:0000625;3.15e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.70e-47,168;CL:0000988,1.43e-45,177;CL:0002032,1.57e-44,161;CL:0000837,1.57e-44,161;CL:0000738,1.34e-43,136;CL:0002087,1.33e-42,115;CL:0002031,6.09e-39,120;CL:0000542,1.14e-23,53;CL:0000051,1.14e-23,53;CL:0000838,1.74e-23,52;CL:0000860,1.24e-22,42;CL:0002057,1.24e-22,42;CL:0000763,1.37e-20,108;CL:0000049,1.37e-20,108;CL:0000473,2.09e-19,48;CL:0000234,2.09e-19,48;CL:0000766,2.16e-19,72;CL:0002194,2.79e-17,59;CL:0000576,2.79e-17,59;CL:0000040,2.79e-17,59;CL:0000559,2.79e-17,59;CL:0000839,1.15e-16,66;CL:0002009,2.60e-16,61;CL:0000557,6.57e-16,67;CL:0000115,1.27e-13,36;CL:0002139,3.42e-13,24;CL:0000084,1.51e-12,25;CL:0000827,1.51e-12,25;CL:0000945,3.78e-11,24;CL:0000826,3.78e-11,24;CL:0000791,8.68e-11,18;CL:0000789,8.68e-11,18;CL:0002420,8.68e-11,18;CL:0002419,8.68e-11,18;CL:0000790,8.68e-11,18;CL:0002078,2.26e-10,45;CL:0000071,2.35e-10,18;CL:0002546,2.35e-10,18;CL:0000236,2.52e-08,14;CL:0000625,3.08e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-16;42!CL:0000051;5.02e-14;53!CL:0000790;9.01e-11;18!CL:0002546;2.31e-10;18!CL:0000049;4.87e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!3.66e-08!51;DOID:0060083!3.66e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-08,51;DOID:0060083,1.60e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.59e-23!112;UBERON:0002390!7.24e-21!102;UBERON:0003061!7.24e-21!102;UBERON:0007023!2.65e-18!115;UBERON:0002405!5.16e-14!115;UBERON:0003081!2.25e-13!216;UBERON:0002371!1.81e-12!80;UBERON:0001474!2.90e-10!86;UBERON:0001986!9.68e-10!18;UBERON:0004638!9.68e-10!18;UBERON:0004852!9.68e-10!18;UBERON:0000178!1.22e-07!15;UBERON:0000179!1.22e-07!15;UBERON:0000463!1.22e-07!15;UBERON:0004765!8.66e-07!101;UBERON:0001434!8.66e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-10;18!UBERON:0001986;2.31e-10;18!UBERON:0004852;2.31e-10;18!UBERON:0000178;4.16e-08;15!UBERON:0000179;4.16e-08;15!UBERON:0000463;4.16e-08;15!UBERON:0000487;2.29e-07;22!UBERON:0002390;5.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.46e-26,108;UBERON:0002390,2.72e-24,98;UBERON:0003061,2.72e-24,98;UBERON:0002405,6.28e-20,93;UBERON:0007023,9.01e-19,114;UBERON:0003081,1.65e-15,203;UBERON:0002371,6.75e-15,76;UBERON:0001474,3.28e-12,82;UBERON:0004638,2.35e-10,18;UBERON:0001986,2.35e-10,18;UBERON:0004852,2.35e-10,18;UBERON:0004765,5.18e-09,90;UBERON:0000178,4.23e-08,15;UBERON:0000179,4.23e-08,15;UBERON:0000463,4.23e-08,15;UBERON:0000487,2.36e-07,22;UBERON:0001434,8.02e-07,100 | |||
|phase1_expression=0.363356758541113,0,2.25527046553554,0,0,0.872338524100369,0,1.26343974685366,0.522371256399677,2.21160542851358,11.1648186875588,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,29.1899209957174,25.779585087283,27.0765087719057,133.743854128627,33.7769870325547,39.9425598155476,0,0.6024118375565,0,79.2489461936486,21.7518925705755,68.7025028043543,26.0377842009982,18.0490002723128,26.2583153566181,9.1805344438369,12.3079593087212,5.40908692031792,45.0734540216651,47.2344929611012,45.8483875644973,76.0042950681589,43.5837961303135,62.870393291706,54.9492469335307,44.5719629360635,76.1472780241244,72.3965929546899,62.6120143076311,79.9016270906616,63.814153104943,52.6708869611642,85.8443710580223,74.0723019537584,74.4555342816537,77.359792221684,34.3045352194185,33.5098944804342,37.9340027974098,58.622266202974,37.4474248296152,50.4486021686416,50.7522303818621,38.0682530446747,61.464443051548,69.6209428028374,60.7658099379482,93.03994190762,207.030180585703,153.712908874726,189.321756894063,77.0574409664956,54.2138583157838,44.5209875150912,273.327221247857,178.428259447584,195.450644528158,114.39755889986,94.4819797483487,97.846017924991,133.993289885883,123.321964007092,104.604944071716,105.767179645578,131.65941812588,35.8604170538952,27.0129107110632,22.1718472312633,50.2251048600298,24.6623767711876,64.792484854669,35.9978879308315,35.763979410174,52.2227807458753,179.558296049588,184.146080647979,190.799465711097,126.637373465142,131.35292866762,170.282214520456,186.088471450242,141.630420749103,164.597345847493,159.84293815109,78.6013184005572,96.9988562428328,109.835369493585,131.233608398423,104.073382126898,97.2180371386284,106.057544764922,169.766678665651,159.786762149423,96.9065420434696,114.683549156675,103.522269163171,113.103793289357,89.5921958512748,90.6145206973282,107.440424835017,113.889858233172,105.104383605894,22.57995524117,16.3138519427939,23.3167290251306,0,4.02420515822182,1.79007586580942,0.722878304769133,0.50133791063589,1.44846518960824,1.5905718941022,5.35298357332899,0.0945348171640679,0,0.351339142772504,12.3775226345338,0,0,2.27183175558278,2.08955684759121,1.32957960518865,9.06264372360299,13.1558829479429,4.82894751728434,62.2126335057787,42.1514951602001,70.8166623279492,43.5287115281487,86.4168838592406,66.5785661494963,71.2672835890524,90.1874489500958,62.9706284955477,59.5802690721113,33.8376626371683,82.1093874175994,38.5618050926108,48.5315266056547,60.760646091132,69.8323875181504,48.4983444872527,51.4634465808783,90.4568161048711,88.281706339836,47.2660499340451,42.1697335795402,23.2668158488995,0,0,1.01304409331664,0,0.286836620748814,1.77334191099179,0,0,0,0,1.0776853765575,0.326923806226917,0,0,0,0,5.70471821544449,0.747243402759005,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0.505008341862199,0,0.554128230968366,0,2.45190236639216,0.600952235626387,0.226864366320042,0,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0.37223371266318,0.675105328965065,0,0,0,0,0.710019185033229,0,0.339121184620975,0,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0,0,0,0,0,0,0.928735856063958,0,1.30137480043828,0.674338760312407,1.20505514941741,1.32352767278873,2.17879444092406,1.42362371466658,1.21348177344148,0.392442930250692,0.769494313892781,39.1222390951064,19.6338483324824,0.4115740113314,2.94017422771084,0,1.96565443335525,9.45263850690247,111.248701052492,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0,49.0845922387651,40.7427251067417,42.61693010055,0,0,3.69325509131096,2.80805118167085,2.52672975890838,0,0,0.425325291727159,0.716468181622786,0.871901815541886,1.15014803749563,2.95597942737566,2.11316241631742,4.76854665743776,6.05303804351238,6.05963680446624,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,4.22651376278,0.26593811658487,0,1.80045161983499,0,0.799266537048298,0.285955987316295,0,0,2.93162565864362,0,0,0,0,0.099972991182057,0,3.01354254859276,0,0,0,1.42636905040718,0.723906533337896,0,0.179060963239896,28.5817117183495,35.268506076145,26.9534468574397,37.3478235574068,0.254094624222463,0,0,0.167516265334349,0,20.9721966705211,11.966458368161,16.1622050240054,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.368738337083406,1.04260337361699,0.195801157462741,0,47.3498779821412,47.8885525817329,34.6864562861194,0,0,0,0,0.153461973288062,0,1.28139149255701,0,0.321707842287215,0,0.462629081407967,0,0.0821271560138091,2.59627214591811,0.116210378459959,0.483437798366489,0.200506470303285,1.28913384510255,1.14814448164607,0,0.262248829918848,4.51199612907412,6.08421163124877,6.27479815341484,11.6911379722609,6.64975262025117,64.8280289204111,102.736597987015,15.7618618754562,126.466347206037,1.08378575017541,1.50506932156456,9.43042210266642,8.31076008928724,6.04461837749881,4.16593765627276,5.49014447152291,0.769350375349168,0,0,18.3413000732946,0.27470839445503,1.07262349896764,0,0,0,0.096670718292122,0.1540486171146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| |||
|short_description=p1@ICAM2 | |||
}} |
Latest revision as of 19:09, 16 September 2015
Short description: | p1@ICAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ICAM2_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 0bp_to_ENST00000412356, ENST00000418105, NM_001099786, NM_001099787, NM_001099788, NM_001099789, uc002jdv.3, uc002jdw.3, uc002jdx.3, uc010ded.2, uc010wpx.1_5end |
EntrezGene: | ICAM2 |
HGNC: | 5345 |
UniProt: | P13598Q6FHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.46e-26 | 108 |
hematopoietic system | 2.72e-24 | 98 |
blood island | 2.72e-24 | 98 |
immune system | 6.28e-20 | 93 |
adult organism | 9.01e-19 | 114 |
lateral plate mesoderm | 1.65e-15 | 203 |
bone marrow | 6.75e-15 | 76 |
bone element | 3.28e-12 | 82 |
blood vessel endothelium | 2.35e-10 | 18 |
endothelium | 2.35e-10 | 18 |
cardiovascular system endothelium | 2.35e-10 | 18 |
skeletal element | 5.18e-09 | 90 |
blood | 4.23e-08 | 15 |
haemolymphatic fluid | 4.23e-08 | 15 |
organism substance | 4.23e-08 | 15 |
simple squamous epithelium | 2.36e-07 | 22 |
skeletal system | 8.02e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.60e-08 | 51 |
immune system cancer | 1.60e-08 | 51 |