FFCP PHASE1:Hg19::chr17:62097927..62098000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3384 | |EntrezGene=3384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5345 | |HGNC=5345 | ||
|TSSclassifier=strong | |||
|UniProt=P13598,Q6FHE2 | |UniProt=P13598,Q6FHE2 | ||
|association_with_transcript=0bp_to_ENST00000412356,ENST00000418105,NM_001099786,NM_001099787,NM_001099788,NM_001099789,uc002jdv.3,uc002jdw.3,uc002jdx.3,uc010ded.2,uc010wpx.1_5end | |association_with_transcript=0bp_to_ENST00000412356,ENST00000418105,NM_001099786,NM_001099787,NM_001099788,NM_001099789,uc002jdv.3,uc002jdw.3,uc002jdx.3,uc010ded.2,uc010wpx.1_5end | ||
|cluster_id=chr17:62097927..62098000,- | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_1_at_ICAM2_5end | |description=CAGE_peak_1_at_ICAM2_5end | ||
|id=chr17:62097927..62098000,- | |id=chr17:62097927..62098000,- | ||
|ontology_enrichment_celltype=CL:0000037!3.59e-42!172;CL:0000566!3.59e-42!172;CL:0000988!6.06e-41!182;CL:0002032!1.89e-39!165;CL:0000837!1.89e-39!165;CL:0000738!1.49e-38!140;CL:0002087!4.32e-37!119;CL:0002031!8.57e-34!124;CL:0000542!4.02e-22!53;CL:0000051!4.02e-22!53;CL:0000838!5.95e-22!52;CL:0002057!3.71e-21!42;CL:0000860!4.05e-18!45;CL:0000763!1.04e-17!112;CL:0000049!1.04e-17!112;CL:0000766!3.79e-16!76;CL:0002194!4.17e-14!63;CL:0000576!4.17e-14!63;CL:0000040!4.17e-14!63;CL:0000559!4.17e-14!63;CL:0000839!9.91e-14!70;CL:0002009!3.14e-13!65;CL:0000557!5.26e-13!71;CL:0002139!2.22e-12!24;CL:0000115!6.06e-12!35;CL:0000084!8.84e-12!25;CL:0000827!8.84e-12!25;CL:0000945!1.77e-10!24;CL:0000826!1.77e-10!24;CL:0000791!3.83e-10!18;CL:0000789!3.83e-10!18;CL:0002420!3.83e-10!18;CL:0002419!3.83e-10!18;CL:0000790!3.83e-10!18;CL:0000071!9.68e-10!18;CL:0002546!9.68e-10!18;CL:0002078!5.14e-09!44;CL:0000236!7.50e-08!14;CL:0000625!7.72e-07!11 | |ontology_enrichment_celltype=CL:0000037!3.59e-42!172;CL:0000566!3.59e-42!172;CL:0000988!6.06e-41!182;CL:0002032!1.89e-39!165;CL:0000837!1.89e-39!165;CL:0000738!1.49e-38!140;CL:0002087!4.32e-37!119;CL:0002031!8.57e-34!124;CL:0000542!4.02e-22!53;CL:0000051!4.02e-22!53;CL:0000838!5.95e-22!52;CL:0002057!3.71e-21!42;CL:0000860!4.05e-18!45;CL:0000763!1.04e-17!112;CL:0000049!1.04e-17!112;CL:0000766!3.79e-16!76;CL:0002194!4.17e-14!63;CL:0000576!4.17e-14!63;CL:0000040!4.17e-14!63;CL:0000559!4.17e-14!63;CL:0000839!9.91e-14!70;CL:0002009!3.14e-13!65;CL:0000557!5.26e-13!71;CL:0002139!2.22e-12!24;CL:0000115!6.06e-12!35;CL:0000084!8.84e-12!25;CL:0000827!8.84e-12!25;CL:0000945!1.77e-10!24;CL:0000826!1.77e-10!24;CL:0000791!3.83e-10!18;CL:0000789!3.83e-10!18;CL:0002420!3.83e-10!18;CL:0002419!3.83e-10!18;CL:0000790!3.83e-10!18;CL:0000071!9.68e-10!18;CL:0002546!9.68e-10!18;CL:0002078!5.14e-09!44;CL:0000236!7.50e-08!14;CL:0000625!7.72e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-16;33!CL:0002057;4.78e-16;33!CL:0000542;5.02e-14;53!CL:0000576;8.84e-14;48!CL:0002087;1.06e-13;104!CL:0002139;3.36e-13;24!CL:0000084;1.51e-12;25!CL:0000115;1.17e-11;36!CL:0000473;2.15e-11;39!CL:0000234;2.15e-11;39!CL:0000945;3.73e-11;24!CL:0000791;9.01e-11;18!CL:0000789;9.01e-11;18!CL:0002419;9.01e-11;18!CL:0000071;2.31e-10;18!CL:0000766;9.75e-10;69!CL:0000738;1.33e-09;136!CL:0000988;1.67e-08;177!CL:0000763;2.30e-08;100!CL:0000236;5.41e-08;13!CL:0002078;2.71e-07;45!CL:0000625;3.15e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.70e-47,168;CL:0000988,1.43e-45,177;CL:0002032,1.57e-44,161;CL:0000837,1.57e-44,161;CL:0000738,1.34e-43,136;CL:0002087,1.33e-42,115;CL:0002031,6.09e-39,120;CL:0000542,1.14e-23,53;CL:0000051,1.14e-23,53;CL:0000838,1.74e-23,52;CL:0000860,1.24e-22,42;CL:0002057,1.24e-22,42;CL:0000763,1.37e-20,108;CL:0000049,1.37e-20,108;CL:0000473,2.09e-19,48;CL:0000234,2.09e-19,48;CL:0000766,2.16e-19,72;CL:0002194,2.79e-17,59;CL:0000576,2.79e-17,59;CL:0000040,2.79e-17,59;CL:0000559,2.79e-17,59;CL:0000839,1.15e-16,66;CL:0002009,2.60e-16,61;CL:0000557,6.57e-16,67;CL:0000115,1.27e-13,36;CL:0002139,3.42e-13,24;CL:0000084,1.51e-12,25;CL:0000827,1.51e-12,25;CL:0000945,3.78e-11,24;CL:0000826,3.78e-11,24;CL:0000791,8.68e-11,18;CL:0000789,8.68e-11,18;CL:0002420,8.68e-11,18;CL:0002419,8.68e-11,18;CL:0000790,8.68e-11,18;CL:0002078,2.26e-10,45;CL:0000071,2.35e-10,18;CL:0002546,2.35e-10,18;CL:0000236,2.52e-08,14;CL:0000625,3.08e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-16;42!CL:0000051;5.02e-14;53!CL:0000790;9.01e-11;18!CL:0002546;2.31e-10;18!CL:0000049;4.87e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!3.66e-08!51;DOID:0060083!3.66e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.60e-08,51;DOID:0060083,1.60e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.59e-23!112;UBERON:0002390!7.24e-21!102;UBERON:0003061!7.24e-21!102;UBERON:0007023!2.65e-18!115;UBERON:0002405!5.16e-14!115;UBERON:0003081!2.25e-13!216;UBERON:0002371!1.81e-12!80;UBERON:0001474!2.90e-10!86;UBERON:0001986!9.68e-10!18;UBERON:0004638!9.68e-10!18;UBERON:0004852!9.68e-10!18;UBERON:0000178!1.22e-07!15;UBERON:0000179!1.22e-07!15;UBERON:0000463!1.22e-07!15;UBERON:0004765!8.66e-07!101;UBERON:0001434!8.66e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-10;18!UBERON:0001986;2.31e-10;18!UBERON:0004852;2.31e-10;18!UBERON:0000178;4.16e-08;15!UBERON:0000179;4.16e-08;15!UBERON:0000463;4.16e-08;15!UBERON:0000487;2.29e-07;22!UBERON:0002390;5.37e-07;32 | |||
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| ||
|short_description=p1@ICAM2 | |short_description=p1@ICAM2 | ||
}} | }} |
Latest revision as of 19:09, 16 September 2015
Short description: | p1@ICAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ICAM2_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 0bp_to_ENST00000412356, ENST00000418105, NM_001099786, NM_001099787, NM_001099788, NM_001099789, uc002jdv.3, uc002jdw.3, uc002jdx.3, uc010ded.2, uc010wpx.1_5end |
EntrezGene: | ICAM2 |
HGNC: | 5345 |
UniProt: | P13598Q6FHE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.46e-26 | 108 |
hematopoietic system | 2.72e-24 | 98 |
blood island | 2.72e-24 | 98 |
immune system | 6.28e-20 | 93 |
adult organism | 9.01e-19 | 114 |
lateral plate mesoderm | 1.65e-15 | 203 |
bone marrow | 6.75e-15 | 76 |
bone element | 3.28e-12 | 82 |
blood vessel endothelium | 2.35e-10 | 18 |
endothelium | 2.35e-10 | 18 |
cardiovascular system endothelium | 2.35e-10 | 18 |
skeletal element | 5.18e-09 | 90 |
blood | 4.23e-08 | 15 |
haemolymphatic fluid | 4.23e-08 | 15 |
organism substance | 4.23e-08 | 15 |
simple squamous epithelium | 2.36e-07 | 22 |
skeletal system | 8.02e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.60e-08 | 51 |
immune system cancer | 1.60e-08 | 51 |