FFCP PHASE1:Hg19::chr14:95085651..95085662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=79bp_to_BC013189_5end | |association_with_transcript=79bp_to_BC013189_5end | ||
|cluster_id=chr14:95085651..95085662,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_SERPINA3_5end | |description=CAGE_peak_16_at_SERPINA3_5end | ||
|id=chr14:95085651..95085662,+ | |id=chr14:95085651..95085662,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.56e-10!12;CL:0000417!9.56e-10!12;CL:0000668!9.56e-10!12;CL:0000414!9.56e-10!12;CL:0000412!9.56e-10!12;CL:0000182!9.56e-10!12 | |ontology_enrichment_celltype=CL:0000181!9.56e-10!12;CL:0000417!9.56e-10!12;CL:0000668!9.56e-10!12;CL:0000414!9.56e-10!12;CL:0000412!9.56e-10!12;CL:0000182!9.56e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-17;12!CL:0000746;1.21e-08;3!CL:0002615;1.40e-08;3!CL:0000737;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-17,12;CL:0000746,1.21e-08,3;CL:0000513,1.21e-08,3;CL:0002615,1.51e-08,3;CL:0000737,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.10e-09;11!CL:0000513;1.21e-08;3!UBERON:0009497;1.05e-07;13 | |||
|ontology_enrichment_disease=DOID:114!2.96e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.97e-30!115;UBERON:0001049!4.19e-13!57;UBERON:0005068!4.19e-13!57;UBERON:0006241!4.19e-13!57;UBERON:0007135!4.19e-13!57;UBERON:0002107!7.70e-13!19;UBERON:0006925!7.70e-13!19;UBERON:0008836!7.70e-13!19;UBERON:0000025!3.69e-12!194;UBERON:0009497!1.97e-11!25;UBERON:0000015!1.97e-11!25;UBERON:0002423!1.97e-11!25;UBERON:0006235!1.97e-11!25;UBERON:0004161!1.97e-11!25;UBERON:0001017!4.66e-11!82;UBERON:0008835!7.73e-11!22;UBERON:0003894!7.73e-11!22;UBERON:0002616!7.88e-11!59;UBERON:0003075!1.08e-10!86;UBERON:0007284!1.08e-10!86;UBERON:0004111!2.25e-10!241;UBERON:0005743!2.51e-10!86;UBERON:0009854!2.74e-10!23;UBERON:0002346!5.30e-10!90;UBERON:0003076!1.01e-09!15;UBERON:0003057!1.01e-09!15;UBERON:0000955!1.11e-09!69;UBERON:0006238!1.11e-09!69;UBERON:0000477!2.33e-09!286;UBERON:0007499!2.55e-09!25;UBERON:0000073!6.55e-09!94;UBERON:0001016!6.55e-09!94;UBERON:0002365!6.71e-09!31;UBERON:0002330!6.71e-09!31;UBERON:0005057!6.81e-09!26;UBERON:0009856!6.81e-09!26;UBERON:0002417!1.71e-08!61;UBERON:0000916!1.71e-08!61;UBERON:0000949!3.60e-08!45;UBERON:0002081!6.44e-08!2;UBERON:0002368!1.16e-07!35;UBERON:0000475!2.32e-07!365;UBERON:0005177!4.21e-07!107;UBERON:0005172!4.41e-07!55;UBERON:0005173!4.41e-07!55;UBERON:0000481!5.55e-07!347;UBERON:0002020!5.95e-07!34;UBERON:0003528!5.95e-07!34;UBERON:0000062!7.22e-07!511;UBERON:0003103!8.30e-07!69;UBERON:0002298!9.21e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.43e-18;31!UBERON:0002330;5.43e-18;31!UBERON:0002368;1.41e-15;33!UBERON:0000949;6.82e-15;43!UBERON:0005172;3.16e-08;52!UBERON:0005173;3.16e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.21e-29,19;UBERON:0006925,3.21e-29,19;UBERON:0008836,3.21e-29,19;UBERON:0008835,2.76e-25,22;UBERON:0003894,2.76e-25,22;UBERON:0009854,3.35e-24,23;UBERON:0007499,2.72e-22,25;UBERON:0009497,2.72e-22,25;UBERON:0000015,2.72e-22,25;UBERON:0002423,2.72e-22,25;UBERON:0006235,2.72e-22,25;UBERON:0004161,2.72e-22,25;UBERON:0009856,1.91e-21,26;UBERON:0002365,4.92e-18,31;UBERON:0002330,4.92e-18,31;UBERON:0000949,1.02e-17,45;UBERON:0002368,5.28e-16,35;UBERON:0002417,2.97e-13,60;UBERON:0000916,2.97e-13,60;UBERON:0003929,1.92e-10,54;UBERON:0005172,1.92e-10,54;UBERON:0005173,1.92e-10,54;UBERON:0002530,1.43e-09,59;UBERON:0005177,6.92e-08,101;UBERON:0009569,4.47e-07,112;UBERON:0005911,6.51e-07,82;UBERON:0002100,7.51e-07,199;UBERON:0003914,8.78e-07,117 | |||
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|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0,0,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,17.6908899001973,12.4065880403095,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0,0,0,0.393915911536118,0.659326867049332,0.404421263125109,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,7.18105945022604,1.32506888912221,0,0.66116300871345,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,8.59665412356402,0,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@SERPINA3 | |short_description=p16@SERPINA3 | ||
}} | }} |
Latest revision as of 18:59, 16 September 2015
Short description: | p16@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 79bp_to_BC013189_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-17 | 12 |
cardiac muscle cell | 1.21e-08 | 3 |
cardiac muscle myoblast | 1.21e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
striated muscle cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.21e-29 | 19 |
digestive gland | 3.21e-29 | 19 |
liver bud | 3.21e-29 | 19 |
hepatic diverticulum | 2.76e-25 | 22 |
liver primordium | 2.76e-25 | 22 |
digestive tract diverticulum | 3.35e-24 | 23 |
epithelial sac | 2.72e-22 | 25 |
epithelium of foregut-midgut junction | 2.72e-22 | 25 |
anatomical boundary | 2.72e-22 | 25 |
hepatobiliary system | 2.72e-22 | 25 |
foregut-midgut junction | 2.72e-22 | 25 |
septum transversum | 2.72e-22 | 25 |
sac | 1.91e-21 | 26 |
exocrine gland | 4.92e-18 | 31 |
exocrine system | 4.92e-18 | 31 |
endocrine system | 1.02e-17 | 45 |
endocrine gland | 5.28e-16 | 35 |
abdominal segment of trunk | 2.97e-13 | 60 |
abdomen | 2.97e-13 | 60 |
gut epithelium | 1.92e-10 | 54 |
abdomen element | 1.92e-10 | 54 |
abdominal segment element | 1.92e-10 | 54 |
gland | 1.43e-09 | 59 |
trunk region element | 6.92e-08 | 101 |
subdivision of trunk | 4.47e-07 | 112 |
endo-epithelium | 6.51e-07 | 82 |
trunk | 7.51e-07 | 199 |
epithelial tube | 8.78e-07 | 117 |