FFCP PHASE1:Hg19::chr8:140715294..140715304,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51305 | |EntrezGene=51305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6283 | |HGNC=6283 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPC2 | |UniProt=Q9NPC2 | ||
|association_with_transcript=0bp_to_ENST00000303015,ENST00000520439,NM_016601,uc003yvf.1,uc003yvg.1_5end | |association_with_transcript=0bp_to_ENST00000303015,ENST00000520439,NM_016601,uc003yvf.1,uc003yvg.1_5end | ||
|cluster_id=chr8:140715294..140715304,- | |||
|description=CAGE_peak_4_at_KCNK9_5end | |description=CAGE_peak_4_at_KCNK9_5end | ||
|id=chr8:140715294..140715304,- | |id=chr8:140715294..140715304,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.69e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.06e-13;4!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.13e-13,4;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.27e-49!57;UBERON:0005068!3.27e-49!57;UBERON:0006241!3.27e-49!57;UBERON:0007135!3.27e-49!57;UBERON:0002616!2.34e-47!59;UBERON:0001017!6.71e-47!82;UBERON:0000955!1.34e-45!69;UBERON:0006238!1.34e-45!69;UBERON:0005743!1.96e-44!86;UBERON:0000073!2.14e-42!94;UBERON:0001016!2.14e-42!94;UBERON:0002020!3.09e-36!34;UBERON:0003528!3.09e-36!34;UBERON:0003075!5.61e-36!86;UBERON:0007284!5.61e-36!86;UBERON:0001869!1.61e-34!32;UBERON:0002346!4.26e-34!90;UBERON:0002780!2.39e-33!41;UBERON:0001890!2.39e-33!41;UBERON:0006240!2.39e-33!41;UBERON:0003080!1.82e-32!42;UBERON:0001893!2.57e-32!34;UBERON:0007023!3.92e-32!115;UBERON:0002619!1.55e-29!22;UBERON:0002791!2.21e-29!33;UBERON:0001950!7.41e-28!20;UBERON:0000956!8.50e-26!25;UBERON:0000203!8.50e-26!25;UBERON:0000153!2.93e-25!129;UBERON:0007811!2.93e-25!129;UBERON:0000033!6.38e-25!123;UBERON:0004121!8.33e-24!169;UBERON:0000924!4.35e-23!173;UBERON:0006601!4.35e-23!173;UBERON:0004733!1.38e-22!12;UBERON:0002028!1.38e-22!12;UBERON:0007277!1.38e-22!12;UBERON:0003056!3.97e-21!61;UBERON:0004732!9.46e-21!13;UBERON:0002680!6.88e-18!9;UBERON:0001895!6.88e-18!9;UBERON:0010092!6.88e-18!9;UBERON:0003076!8.22e-18!15;UBERON:0003057!8.22e-18!15;UBERON:0002021!6.50e-15!5;UBERON:0000988!5.87e-14!3;UBERON:0000025!1.58e-13!194;UBERON:0002298!2.90e-13!8;UBERON:0002308!7.61e-12!9;UBERON:0000125!7.61e-12!9;UBERON:0000200!9.73e-12!6;UBERON:0001875!8.22e-10!2;UBERON:0006514!8.22e-10!2;UBERON:0004111!1.36e-09!241;UBERON:0002148!1.90e-09!2;UBERON:0009662!1.90e-09!2;UBERON:0000064!3.13e-09!219;UBERON:0000477!1.46e-08!286;UBERON:0001872!1.86e-08!5;UBERON:0000483!3.95e-08!309;UBERON:0000119!5.54e-08!312;UBERON:0002037!1.11e-07!6;UBERON:0006215!1.11e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.10e-50;1!UBERON:0009899;3.10e-50;1!UBERON:0002680;5.74e-23;9!UBERON:0001895;5.74e-23;9!UBERON:0000988;8.69e-18;3!UBERON:0004733;1.57e-17;12!UBERON:0002028;1.57e-17;12!UBERON:0004732;2.84e-16;13!UBERON:0002021;3.10e-11;5!UBERON:0002037;1.38e-09;6!UBERON:0002298;1.38e-09;6!UBERON:0000073;1.82e-07;53!UBERON:0002616;1.82e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,6.58e-50,1;UBERON:0009899,6.58e-50,1;UBERON:0002680,4.59e-23,9;UBERON:0001895,4.59e-23,9;UBERON:0010092,4.59e-23,9;UBERON:0000988,6.76e-18,3;UBERON:0004733,1.33e-17,12;UBERON:0002028,1.33e-17,12;UBERON:0007277,1.33e-17,12;UBERON:0004732,2.43e-16,13;UBERON:0003076,2.58e-14,15;UBERON:0003057,2.58e-14,15;UBERON:0002021,3.60e-11,5;UBERON:0002298,1.22e-09,6;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.995213339381022,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.798169295285756,0.41023272848151,0.252071696221718,1.10651603942749,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.56330385846713,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.995213339381022,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.798169295285756,0.41023272848151,0.252071696221718,1.10651603942749,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.56330385846713,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35866559210006,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@KCNK9 | |short_description=p4@KCNK9 | ||
}} | }} |
Latest revision as of 18:53, 16 September 2015
Short description: | p4@KCNK9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNK9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000303015, ENST00000520439, NM_016601, uc003yvf.1, uc003yvg.1_5end |
EntrezGene: | KCNK9 |
HGNC: | 6283 |
UniProt: | Q9NPC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 6.58e-50 | 1 |
pole of cerebral hemisphere | 6.58e-50 | 1 |
regional part of metencephalon | 4.59e-23 | 9 |
metencephalon | 4.59e-23 | 9 |
future metencephalon | 4.59e-23 | 9 |
pons | 6.76e-18 | 3 |
segmental subdivision of hindbrain | 1.33e-17 | 12 |
hindbrain | 1.33e-17 | 12 |
presumptive hindbrain | 1.33e-17 | 12 |
segmental subdivision of nervous system | 2.43e-16 | 13 |
posterior neural tube | 2.58e-14 | 15 |
chordal neural plate | 2.58e-14 | 15 |
occipital lobe | 3.60e-11 | 5 |
brainstem | 1.22e-09 | 6 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.13e-13 | 4 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |