FFCP PHASE1:Hg19::chr13:20806445..20806465,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:20806445..20806465,- to FFCP PHASE1:Hg19::chr13:20806445..20806465,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10804 | |EntrezGene=10804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4288 | |HGNC=4288 | ||
|TSSclassifier=strong | |||
|UniProt=O95452 | |UniProt=O95452 | ||
|association_with_transcript=-3bp_to_ENST00000400065_5end | |||
|cluster_id=chr13:20806445..20806465,- | |||
|coexpression_cluster_id=C3356 | |||
|description=CAGE_peak_1_at_GJB6_5end | |||
|id=chr13:20806445..20806465,- | |||
|ontology_enrichment_celltype=CL:0002076!2.71e-10!43;CL:0002159!2.17e-07!13;CL:0002057!5.57e-07!42;CL:0002368!6.88e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.06e-09;13!CL:0002076;3.52e-09;42!CL:0000244;2.35e-07;4!CL:0000731;2.35e-07;4!CL:0002159;5.91e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.10e-12,42;CL:0002368,1.05e-09,13;CL:0000223,1.71e-07,58;CL:0000244,2.35e-07,4;CL:0000731,2.35e-07,4;CL:0002159,5.90e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.58e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-27!57;UBERON:0005068!1.28e-27!57;UBERON:0006241!1.28e-27!57;UBERON:0007135!1.28e-27!57;UBERON:0007023!9.61e-24!115;UBERON:0002616!9.35e-22!59;UBERON:0002780!5.51e-21!41;UBERON:0001890!5.51e-21!41;UBERON:0006240!5.51e-21!41;UBERON:0000153!5.95e-21!129;UBERON:0007811!5.95e-21!129;UBERON:0003080!3.73e-20!42;UBERON:0000955!6.13e-19!69;UBERON:0006238!6.13e-19!69;UBERON:0001017!6.20e-19!82;UBERON:0000033!9.46e-19!123;UBERON:0002020!1.57e-18!34;UBERON:0003528!1.57e-18!34;UBERON:0001893!1.99e-18!34;UBERON:0005743!5.65e-18!86;UBERON:0002791!1.07e-17!33;UBERON:0001869!2.51e-17!32;UBERON:0003075!5.15e-17!86;UBERON:0007284!5.15e-17!86;UBERON:0002619!1.48e-15!22;UBERON:0002346!2.07e-15!90;UBERON:0000073!2.28e-15!94;UBERON:0001016!2.28e-15!94;UBERON:0004121!7.36e-15!169;UBERON:0001950!3.58e-14!20;UBERON:0000924!6.54e-14!173;UBERON:0006601!6.54e-14!173;UBERON:0000956!8.99e-13!25;UBERON:0000203!8.99e-13!25;UBERON:0003056!9.78e-13!61;UBERON:0003076!1.30e-08!15;UBERON:0003057!1.30e-08!15;UBERON:0002308!2.24e-07!9;UBERON:0000125!2.24e-07!9;UBERON:0002420!2.29e-07!9;UBERON:0007245!2.29e-07!9;UBERON:0010009!2.29e-07!9;UBERON:0010011!2.29e-07!9;UBERON:0000454!2.29e-07!9;UBERON:0004732!2.99e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.75e-22;34!UBERON:0003528;3.98e-22;34!UBERON:0002020;3.98e-22;34!UBERON:0001869;6.43e-22;32!UBERON:0002791;1.02e-21;32!UBERON:0002619;1.84e-21;22!UBERON:0002780;1.23e-20;41!UBERON:0001890;1.23e-20;41!UBERON:0000073;1.56e-20;53!UBERON:0002616;1.56e-20;53!UBERON:0001950;1.57e-19;20!UBERON:0000956;3.71e-18;25!UBERON:0000203;3.71e-18;25!UBERON:0000955;2.13e-13;68!UBERON:0001017;2.86e-13;75!UBERON:0001016;5.08e-11;83!UBERON:0000125;1.03e-09;9!UBERON:0002308;1.03e-09;9!UBERON:0002420;1.19e-09;9!UBERON:0007245;1.19e-09;9!UBERON:0010009;1.19e-09;9!UBERON:0010011;1.19e-09;9!UBERON:0000454;1.19e-09;9!UBERON:0004732;1.43e-08;13!UBERON:0000365;1.45e-08;5!UBERON:0002298;4.72e-08;6!UBERON:0009663;1.02e-07;7!UBERON:0007023;1.10e-07;114!UBERON:0004733;1.36e-07;12!UBERON:0002028;1.36e-07;12!UBERON:0000200;1.80e-07;6!UBERON:0005910;5.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.64e-38,56;UBERON:0005068,5.64e-38,56;UBERON:0006241,5.64e-38,56;UBERON:0007135,5.64e-38,56;UBERON:0000073,6.93e-35,53;UBERON:0002616,6.93e-35,53;UBERON:0010371,3.87e-29,104;UBERON:0002780,1.54e-28,41;UBERON:0001890,1.54e-28,41;UBERON:0003080,1.54e-28,41;UBERON:0006240,1.54e-28,41;UBERON:0001017,6.13e-28,81;UBERON:0000955,7.28e-28,68;UBERON:0006238,7.28e-28,68;UBERON:0003075,1.79e-26,82;UBERON:0007284,1.79e-26,82;UBERON:0003528,2.22e-26,34;UBERON:0002020,2.22e-26,34;UBERON:0001893,3.13e-26,34;UBERON:0001016,7.91e-25,89;UBERON:0001869,1.13e-24,32;UBERON:0007023,1.50e-24,114;UBERON:0002346,1.74e-24,86;UBERON:0002791,2.15e-24,32;UBERON:0002619,1.61e-21,22;UBERON:0003056,6.51e-21,61;UBERON:0004121,9.57e-21,171;UBERON:0000924,9.57e-21,171;UBERON:0006601,9.57e-21,171;UBERON:0001950,1.44e-19,20;UBERON:0000956,3.31e-18,25;UBERON:0000203,3.31e-18,25;UBERON:0010314,2.09e-16,132;UBERON:0011216,5.74e-14,223;UBERON:0003076,2.08e-10,15;UBERON:0003057,2.08e-10,15;UBERON:0000125,9.40e-10,9;UBERON:0002308,9.40e-10,9;UBERON:0002420,9.74e-10,9;UBERON:0007245,9.74e-10,9;UBERON:0010009,9.74e-10,9;UBERON:0010011,9.74e-10,9;UBERON:0000454,9.74e-10,9;UBERON:0000365,1.45e-08,5;UBERON:0004732,1.54e-08,13;UBERON:0002298,5.10e-08,6;UBERON:0009663,8.94e-08,7;UBERON:0004733,1.46e-07,12;UBERON:0002028,1.46e-07,12;UBERON:0007277,1.46e-07,12;UBERON:0000200,1.90e-07,6;UBERON:0005910,5.59e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,12.871897142705,28.3133563651555,17.378438477839,0,0,0,2.21598163412751,2.60707781711184,1.30206522429511,0,0,0.257575567634187,1.01778767145695,1.13362783106643,0.242584061187816,1.39457422143411,0.822335776043652,0,1.1507695692886,0.512321413058201,0.236482229888585,3.44745680736619,0,1.35426486594342,2.07066573496865,0.818718450173537,1.12361742222542,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0,0.426224750532694,2.03146467040009,0.56738522469114,0,1.00499466102697,0.521482918420201,0.65156653411535,1.81619850790011,1.47311054395026,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,0,0,0,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,0,1.68152568894461,0.263384084775077,0.590129310341499,0.786021525498329,1.23360899399706,6.68745981562712,13.6887351986108,12.7830907548378,17.534405556712,2.78526142212934,2.06224135232386,2.65840673500345,1.89562704635511,2.43373507478783,2.9913649938772,0.328875809207352,2.76350017785848,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,2.15287751125376,0.766440987203842,0,1.01207876807801,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.604820229674197,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,2.35762335895883,85.97368803704,80.8310085270056,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6738876615733,65.9226449052153,38.376276588543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,33.002280591491,1.14721838155602,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,33.4738370496308,7.86812272803337,9.4497234066933,25.6469993089127,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,0.839910640994298,12.1926583628452,0.447792613514241,0,1.15014803749563,0,0,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,23.9682247663098,59.832291840805,108.162449006805,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15381273209015,1.71571711905428,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.80709058424599,10.681394716564,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.7736725353416,42.2539159923739,0,0,0,0,0,0,0,0.0852266274161009,0,23.6357428966199,32.4801213847029,11.357531412018,30.0438609140983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9144274724544,16.0872546128589,22.8671068208777,0,323.740040248765,399.277397332273,881.095715077375,850.436027566164,0,0,0,0,0,0,0,0,0,0,26.4643433259514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,7.87748731898871,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.358042349351218,0,0.591860433821602,4.7896618469388,0,21.3253204140948,8.90573742353772,3.99227596002388,0,0,0,3.86897724170699,0,0,0,0,0,3.54296554325536,8.92413645828019,4.5774520895125,12.6060356321596,6.50204761697804,48.04540197672,0,641.349223681575,44.2463986396833,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16785325009182,0,8.43352004611221,0,0,0,0,0,9.79432837217568,13.0164354034685,0,0.103688191397247,0,0,0,0,0,0,1.38847790668105,50.074115078747,0,0,0,0,0,0,63.7217838328916,0,9.7171718535629,0,0,12.7887807830875,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,5.4037825983881,2.73810757783986,0,0,0,0,0,0,0.399358000997982,0,0,0.335917362433631,0,0,0,0,0,1.77169466726548,0,5.56660782866512,10.896272488926,0,0.137539436597234,0,0.449947783103001,0.77380195455795,7.77594325222716,98.6177981541842,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,14.7382570252168,5.02483886622222,0,0,0.213574825135389,0,0,0.496166021811951,0,0,5.10673006216145,0,0,0,0,0.157054096250234,7.08854543973589,5.24712939078442,10.1404653872265,14.9086390879419,20.9655907404651,14.6547510941665,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57202304140731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,4.61602375474167,24.8830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76284221466185,4.25089728976755,10.535834697772,15.9990764107789,3.27693205088234,13.9006077453078,8.2352579272244,11.4215536207324,5.79071539156051,25.009581349721,50.0760073964184,0,0,0,0,0,0,0,0,0,1.03499260351932,10.265712861996,5.46754669029693,9.30090584255328,8.87821342714695,1.64092442705466,0.548257766857182,3.47347824872506,0,22.8694745474876,4.28561468702629,0.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| ||
|short_description=p1@GJB6 | |||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p1@GJB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJB6_5end |
Coexpression cluster: | C3356_Urothelial_cervical_tongue_Neutrophils_keratoacanthoma_uterus_Sebocyte |
Association with transcript: | -3bp_to_ENST00000400065_5end |
EntrezGene: | GJB6 |
HGNC: | 4288 |
UniProt: | O95452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.10e-12 | 42 |
respiratory epithelial cell | 1.05e-09 | 13 |
endodermal cell | 1.71e-07 | 58 |
transitional epithelial cell | 2.35e-07 | 4 |
urothelial cell | 2.35e-07 | 4 |
general ecto-epithelial cell | 5.90e-07 | 14 |