FFCP PHASE1:Hg19::chr1:24239874..24239886,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1269 | |EntrezGene=1269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2160 | |HGNC=2160 | ||
|TSSclassifier=strong | |||
|UniProt=P34972 | |UniProt=P34972 | ||
|association_with_transcript=-22bp_to_ENST00000374472_5end | |association_with_transcript=-22bp_to_ENST00000374472_5end | ||
|cluster_id=chr1:24239874..24239886,- | |||
|description=CAGE_peak_3_at_CNR2_5end | |description=CAGE_peak_3_at_CNR2_5end | ||
|id=chr1:24239874..24239886,- | |id=chr1:24239874..24239886,- | ||
|ontology_enrichment_celltype=CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0002032!2.41e-35!165;CL:0000837!2.41e-35!165;CL:0000988!2.52e-35!182;CL:0000945!6.96e-32!24;CL:0000826!6.96e-32!24;CL:0000542!5.42e-31!53;CL:0000051!5.42e-31!53;CL:0000738!1.50e-30!140;CL:0000838!1.48e-29!52;CL:0002087!1.25e-26!119;CL:0002031!1.03e-23!124;CL:0000236!1.85e-19!14;CL:0000763!1.90e-10!112;CL:0000049!1.90e-10!112;CL:0000134!1.22e-08!358;CL:0002320!3.76e-08!365;CL:0000625!5.58e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0002032!2.41e-35!165;CL:0000837!2.41e-35!165;CL:0000988!2.52e-35!182;CL:0000945!6.96e-32!24;CL:0000826!6.96e-32!24;CL:0000542!5.42e-31!53;CL:0000051!5.42e-31!53;CL:0000738!1.50e-30!140;CL:0000838!1.48e-29!52;CL:0002087!1.25e-26!119;CL:0002031!1.03e-23!124;CL:0000236!1.85e-19!14;CL:0000763!1.90e-10!112;CL:0000049!1.90e-10!112;CL:0000134!1.22e-08!358;CL:0002320!3.76e-08!365;CL:0000625!5.58e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.02e-29;13!CL:0000945;2.03e-26;24!CL:0000542;2.07e-11;53!CL:0000775;3.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.83e-33,14;CL:0000945,1.06e-26,24;CL:0000826,1.06e-26,24;CL:0000037,2.24e-20,168;CL:0002032,5.94e-20,161;CL:0000837,5.94e-20,161;CL:0000542,1.23e-19,53;CL:0000051,1.23e-19,53;CL:0000988,5.36e-19,177;CL:0000838,1.35e-17,52;CL:0000738,1.87e-14,136;CL:0002087,8.82e-12,115;CL:0000785,1.17e-10,2;CL:0000955,1.17e-10,2;CL:0000818,1.17e-10,2;CL:0000954,1.17e-10,2;CL:0000816,1.17e-10,2;CL:0002031,7.06e-10,120;CL:0000817,2.25e-07,3;CL:0000775,2.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-11;53!UBERON:0004872;9.79e-11;7!CL:0000954;1.49e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!8.53e-13!51;DOID:0060083!8.53e-13!51;DOID:0060058!1.41e-08!10;DOID:1240!6.54e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.86e-10;51!DOID:0060083;8.86e-10;51!DOID:0060058;1.31e-07;10!DOID:1240;3.64e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.35e-15,51;DOID:0060083,3.35e-15,51;DOID:1240,1.74e-10,39;DOID:0060058,1.43e-07,10;DOID:8692,9.31e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.07e-09!7;UBERON:0002390!9.57e-09!102;UBERON:0003061!9.57e-09!102;UBERON:0002193!9.75e-09!112;UBERON:0002384!1.71e-07!375;UBERON:0000178!3.24e-07!15;UBERON:0000179!3.24e-07!15;UBERON:0000463!3.24e-07!15;UBERON:0002106!8.18e-07!3;UBERON:0004854!8.18e-07!3;UBERON:0009034!8.18e-07!3;UBERON:0002095!8.18e-07!3;UBERON:0004782!8.18e-07!3;UBERON:0003281!8.18e-07!3;UBERON:0009664!8.18e-07!3;UBERON:0002296!8.18e-07!3;UBERON:0005602!8.18e-07!3;UBERON:0001179!8.18e-07!3;UBERON:0006293!8.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.58e-14;3!UBERON:0004177;6.54e-09;5!UBERON:0005057;6.54e-09;5!UBERON:0000178;1.30e-07;15!UBERON:0000179;1.30e-07;15!UBERON:0000463;1.30e-07;15!UBERON:0002390;1.45e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.41e-14,3;UBERON:0004854,3.41e-14,3;UBERON:0009034,3.41e-14,3;UBERON:0002095,3.41e-14,3;UBERON:0004782,3.41e-14,3;UBERON:0003281,3.41e-14,3;UBERON:0009664,3.41e-14,3;UBERON:0002296,3.41e-14,3;UBERON:0005602,3.41e-14,3;UBERON:0001179,3.41e-14,3;UBERON:0006293,3.41e-14,3;UBERON:0004177,6.82e-11,7;UBERON:0005057,6.82e-11,7;UBERON:0000178,1.17e-07,15;UBERON:0000179,1.17e-07,15;UBERON:0000463,1.17e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.985207073399349,0.708397031823113,3.93364276848904,0,0.309632246632152,0,0,0,0.309868802321207,0.568676929949686,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,1.4555043671269,0,1.23350366406548,0,0,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0.659702600373432,2.39356389145958,1.27867425159808,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.82297027883492,0,2.98711155796555,2.40237592221607,2.29900975981793,0.661044872784862,2.86216126360609,0.569212969109448,1.76171156811282,2.29363936875137,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,1.15921234294021,0,0,0,0,0,0,0.253019692019503,0.95569624297229,0,0,0,0.127986611154418,0,0.473554504088034,1.64225599384209,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71634234366989,0.788123040807709,0,0.513372145118994,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,2.27858874869665,1.66762242820452,1.64544909234478,0,1.62009431171434,3.17250070517708,0,0,0,1.30062222588003,0,0,2.07254154547469,0.399158742865633,0.5745161103971,8.04359614350755,0,0,0,0.313359791546046,0,1.18504244461122,3.85411380248879,3.8341944366299,3.40676990152261,0,0,0,0,0.781552381608161,0,0,0,1.6653598399891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99454018280188,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,3.28418620588199,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31577485171795,2.19156819110162,1.09935271517422,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.534434810531121,0.18378979906969,0.250707539292375,0,0.267964130156178,0,0,0,0,0.387533459016037,0.31037357147929,0,0,0.202117188958219,0,0,1.14498490124799,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,4.48795889224526 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.985207073399349,0.708397031823113,3.93364276848904,0,0.309632246632152,0,0,0,0.309868802321207,0.568676929949686,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,1.4555043671269,0,1.23350366406548,0,0,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0.659702600373432,2.39356389145958,1.27867425159808,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.82297027883492,0,2.98711155796555,2.40237592221607,2.29900975981793,0.661044872784862,2.86216126360609,0.569212969109448,1.76171156811282,2.29363936875137,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,1.15921234294021,0,0,0,0,0,0,0.253019692019503,0.95569624297229,0,0,0,0.127986611154418,0,0.473554504088034,1.64225599384209,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71634234366989,0.788123040807709,0,0.513372145118994,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,2.27858874869665,1.66762242820452,1.64544909234478,0,1.62009431171434,3.17250070517708,0,0,0,1.30062222588003,0,0,2.07254154547469,0.399158742865633,0.5745161103971,8.04359614350755,0,0,0,0.313359791546046,0,1.18504244461122,3.85411380248879,3.8341944366299,3.40676990152261,0,0,0,0,0.781552381608161,0,0,0,1.6653598399891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99454018280188,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,3.28418620588199,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31577485171795,2.19156819110162,1.09935271517422,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.534434810531121,0.18378979906969,0.250707539292375,0,0.267964130156178,0,0,0,0,0.387533459016037,0.31037357147929,0,0,0.202117188958219,0,0,1.14498490124799,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,4.48795889224526 | ||
|short_description=p3@CNR2 | |short_description=p3@CNR2 | ||
}} | }} |
Latest revision as of 18:48, 16 September 2015
Short description: | p3@CNR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000374472_5end |
EntrezGene: | CNR2 |
HGNC: | 2160 |
UniProt: | P34972 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.83e-33 | 14 |
lymphocyte of B lineage | 1.06e-26 | 24 |
pro-B cell | 1.06e-26 | 24 |
hematopoietic stem cell | 2.24e-20 | 168 |
hematopoietic oligopotent progenitor cell | 5.94e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.94e-20 | 161 |
lymphocyte | 1.23e-19 | 53 |
common lymphoid progenitor | 1.23e-19 | 53 |
hematopoietic cell | 5.36e-19 | 177 |
lymphoid lineage restricted progenitor cell | 1.35e-17 | 52 |
leukocyte | 1.87e-14 | 136 |
nongranular leukocyte | 8.82e-12 | 115 |
mature B cell | 1.17e-10 | 2 |
pre-B-II cell | 1.17e-10 | 2 |
transitional stage B cell | 1.17e-10 | 2 |
small pre-B-II cell | 1.17e-10 | 2 |
immature B cell | 1.17e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 7.06e-10 | 120 |
precursor B cell | 2.25e-07 | 3 |
neutrophil | 2.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.41e-14 | 3 |
gastrointestinal system mesentery | 3.41e-14 | 3 |
stomach region | 3.41e-14 | 3 |
mesentery | 3.41e-14 | 3 |
gastrointestinal system serosa | 3.41e-14 | 3 |
mesentery of stomach | 3.41e-14 | 3 |
gut mesentery | 3.41e-14 | 3 |
dorsal mesentery | 3.41e-14 | 3 |
dorsal mesogastrium | 3.41e-14 | 3 |
peritoneal cavity | 3.41e-14 | 3 |
spleen primordium | 3.41e-14 | 3 |
hemopoietic organ | 6.82e-11 | 7 |
immune organ | 6.82e-11 | 7 |
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.35e-15 | 51 |
immune system cancer | 3.35e-15 | 51 |
leukemia | 1.74e-10 | 39 |
lymphoma | 1.43e-07 | 10 |
myeloid leukemia | 9.31e-07 | 31 |