FFCP PHASE1:Hg19::chr16:475599..475672,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:475599..475672,+ to FFCP PHASE1:Hg19::chr16:475599..475672,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9727 | |EntrezGene=9727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17224 | |HGNC=17224 | ||
|TSSclassifier=strong | |||
|UniProt=O75154 | |UniProt=O75154 | ||
|association_with_transcript=0bp_to_ENST00000262305,ENST00000457159,NM_014700,uc002chf.2_5end | |||
|cluster_id=chr16:475599..475672,+ | |||
|description=CAGE_peak_1_at_RAB11FIP3_5end | |||
|id=chr16:475599..475672,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.77e-10!119;CL:0000213!8.16e-10!57;CL:0000215!8.16e-10!57;CL:0002078!1.65e-08!44;CL:0000115!1.34e-07!35;CL:0000055!4.15e-07!180;CL:1000449!6.98e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.64e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.05e-10,121;CL:0000213,3.45e-10,58;CL:0000215,3.45e-10,58;CL:0002078,6.91e-09,45;CL:0000115,5.50e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-25!82;UBERON:0005743!1.65e-25!86;UBERON:0001049!1.45e-24!57;UBERON:0005068!1.45e-24!57;UBERON:0006241!1.45e-24!57;UBERON:0007135!1.45e-24!57;UBERON:0000025!2.58e-24!194;UBERON:0003075!9.76e-24!86;UBERON:0007284!9.76e-24!86;UBERON:0002346!2.27e-23!90;UBERON:0000073!2.50e-23!94;UBERON:0001016!2.50e-23!94;UBERON:0002616!4.80e-23!59;UBERON:0000955!2.44e-22!69;UBERON:0006238!2.44e-22!69;UBERON:0004111!3.95e-22!241;UBERON:0000483!5.37e-22!309;UBERON:0000475!5.65e-22!365;UBERON:0000119!1.55e-21!312;UBERON:0000477!1.31e-19!286;UBERON:0002780!1.63e-19!41;UBERON:0001890!1.63e-19!41;UBERON:0006240!1.63e-19!41;UBERON:0003080!1.80e-19!42;UBERON:0007023!2.34e-18!115;UBERON:0001893!4.30e-18!34;UBERON:0002020!7.14e-18!34;UBERON:0003528!7.14e-18!34;UBERON:0003056!1.76e-17!61;UBERON:0002791!1.79e-17!33;UBERON:0001869!2.03e-17!32;UBERON:0000924!1.51e-15!173;UBERON:0006601!1.51e-15!173;UBERON:0004121!1.74e-15!169;UBERON:0000033!6.81e-15!123;UBERON:0002619!2.87e-14!22;UBERON:0000956!5.44e-14!25;UBERON:0000203!5.44e-14!25;UBERON:0000153!5.90e-14!129;UBERON:0007811!5.90e-14!129;UBERON:0001950!4.45e-13!20;UBERON:0000481!2.27e-11!347;UBERON:0000064!8.56e-10!219;UBERON:0009569!5.11e-08!113;UBERON:0003914!6.07e-08!118;UBERON:0002417!7.24e-08!61;UBERON:0000916!7.24e-08!61;UBERON:0000468!1.28e-07!659;UBERON:0002049!2.25e-07!79;UBERON:0007798!2.25e-07!79;UBERON:0000489!2.83e-07!32;UBERON:0006555!3.53e-07!17;UBERON:0005103!3.53e-07!17;UBERON:0000083!3.53e-07!17;UBERON:0009201!3.53e-07!17;UBERON:0004819!3.53e-07!17;UBERON:0006553!3.53e-07!17;UBERON:0003074!3.53e-07!17;UBERON:0003060!3.53e-07!17;UBERON:0002113!4.07e-07!27;UBERON:0003918!4.07e-07!27;UBERON:0005095!4.07e-07!27;UBERON:0007687!4.07e-07!27;UBERON:0004876!4.58e-07!20;UBERON:0000080!6.04e-07!18;UBERON:0002120!6.04e-07!18;UBERON:0004875!6.04e-07!18;UBERON:0005721!6.04e-07!18;UBERON:0005754!6.04e-07!18;UBERON:0007297!6.04e-07!18;UBERON:0004211!6.98e-07!16;UBERON:0001285!6.98e-07!16;UBERON:0007684!6.98e-07!16;UBERON:0003220!6.98e-07!16;UBERON:0004208!6.98e-07!16;UBERON:0000055!9.90e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.01e-15;32!UBERON:0001893;1.20e-15;34!UBERON:0002791;1.99e-15;32!UBERON:0003528;2.40e-15;34!UBERON:0002020;2.40e-15;34!UBERON:0002780;2.29e-14;41!UBERON:0001890;2.29e-14;41!UBERON:0002619;3.28e-14;22!UBERON:0000956;5.71e-14;25!UBERON:0000203;5.71e-14;25!UBERON:0000073;7.42e-14;53!UBERON:0002616;7.42e-14;53!UBERON:0001950;5.02e-13;20!UBERON:0000955;1.03e-10;68!UBERON:0001017;2.08e-10;75!UBERON:0001016;7.48e-09;83!UBERON:0000489;7.28e-07;29 | |||
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| ||
|short_description=p1@RAB11FIP3 | |||
}} | }} |
Latest revision as of 18:40, 16 September 2015
Short description: | p1@RAB11FIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB11FIP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262305, ENST00000457159, NM_014700, uc002chf.2_5end |
EntrezGene: | RAB11FIP3 |
HGNC: | 17224 |
UniProt: | O75154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.05e-10 | 121 |
lining cell | 3.45e-10 | 58 |
barrier cell | 3.45e-10 | 58 |
meso-epithelial cell | 6.91e-09 | 45 |
endothelial cell | 5.50e-08 | 36 |