FFCP PHASE1:Hg19::chr5:16508921..16508942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54463 | |EntrezGene=54463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25964 | |HGNC=25964 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_uc003jfr.2_5end | |association_with_transcript=88bp_to_uc003jfr.2_5end | ||
|cluster_id=chr5:16508921..16508942,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_3_at_FAM134B_5end | |description=CAGE_peak_3_at_FAM134B_5end | ||
|id=chr5:16508921..16508942,- | |id=chr5:16508921..16508942,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.61e-10;29!UBERON:0003104;3.28e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.52e-08!106 | |ontology_enrichment_disease=DOID:305!1.52e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:114;7.45e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.66e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.95e-22!115;UBERON:0001007!1.56e-11!155;UBERON:0001555!1.56e-11!155;UBERON:0007026!1.56e-11!155;UBERON:0001737!1.59e-11!9;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0000062!2.48e-10!511;UBERON:0004119!7.51e-10!169;UBERON:0000925!7.51e-10!169;UBERON:0006595!7.51e-10!169;UBERON:0001041!1.02e-09!98;UBERON:0000481!2.09e-09!347;UBERON:0001557!2.82e-09!19;UBERON:0000077!6.46e-09!130;UBERON:0001004!8.57e-08!72;UBERON:0000468!3.16e-07!659;UBERON:0008947!3.93e-07!38;UBERON:0003258!3.93e-07!38 | |ontology_enrichment_uberon=UBERON:0007023!9.95e-22!115;UBERON:0001007!1.56e-11!155;UBERON:0001555!1.56e-11!155;UBERON:0007026!1.56e-11!155;UBERON:0001737!1.59e-11!9;UBERON:0004921!2.16e-11!129;UBERON:0004185!2.16e-11!129;UBERON:0000062!2.48e-10!511;UBERON:0004119!7.51e-10!169;UBERON:0000925!7.51e-10!169;UBERON:0006595!7.51e-10!169;UBERON:0001041!1.02e-09!98;UBERON:0000481!2.09e-09!347;UBERON:0001557!2.82e-09!19;UBERON:0000077!6.46e-09!130;UBERON:0001004!8.57e-08!72;UBERON:0000468!3.16e-07!659;UBERON:0008947!3.93e-07!38;UBERON:0003258!3.93e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.51e-21;9!UBERON:0001557;1.51e-21;9!UBERON:0004151;6.27e-09;3!UBERON:0003978;1.33e-08;3!UBERON:0000946;1.33e-08;3!UBERON:0007100;1.67e-07;25!UBERON:0005090;5.10e-07;2!UBERON:0001630;5.10e-07;2!UBERON:0000341;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.72e-21,9;UBERON:0001557,2.06e-14,19;UBERON:0007023,9.05e-11,114;UBERON:0001041,1.16e-10,87;UBERON:0004151,6.28e-09,3;UBERON:0003978,1.38e-08,3;UBERON:0009751,1.38e-08,3;UBERON:0000946,1.38e-08,3;UBERON:0002523,1.38e-08,3;UBERON:0005983,1.38e-08,3;UBERON:0002165,1.38e-08,3;UBERON:0002062,1.38e-08,3;UBERON:0007280,1.38e-08,3;UBERON:0004921,1.58e-08,118;UBERON:0001007,8.68e-08,145;UBERON:0001555,8.68e-08,145;UBERON:0007026,8.68e-08,145;UBERON:0000072,1.33e-07,47;UBERON:0003103,1.97e-07,68;UBERON:0008947,4.47e-07,38;UBERON:0003258,4.47e-07,38;UBERON:0004119,4.64e-07,160;UBERON:0000925,4.64e-07,160;UBERON:0006595,4.64e-07,160;UBERON:0005090,5.18e-07,2;UBERON:0001630,5.18e-07,2;UBERON:0007100,8.30e-07,27;UBERON:0000341,9.56e-07,2 | |||
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| ||
|short_description=p3@FAM134B | |short_description=p3@FAM134B | ||
}} | }} |
Latest revision as of 18:31, 16 September 2015
Short description: | p3@FAM134B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM134B_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 88bp_to_uc003jfr.2_5end |
EntrezGene: | FAM134B |
HGNC: | 25964 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.72e-21 | 9 |
upper respiratory tract | 2.06e-14 | 19 |
adult organism | 9.05e-11 | 114 |
foregut | 1.16e-10 | 87 |
cardiac chamber | 6.28e-09 | 3 |
valve | 1.38e-08 | 3 |
cardiac mesenchyme | 1.38e-08 | 3 |
cardial valve | 1.38e-08 | 3 |
tunica intima | 1.38e-08 | 3 |
heart layer | 1.38e-08 | 3 |
endocardium | 1.38e-08 | 3 |
endocardial cushion | 1.38e-08 | 3 |
presumptive endocardium | 1.38e-08 | 3 |
subdivision of digestive tract | 1.58e-08 | 118 |
digestive system | 8.68e-08 | 145 |
digestive tract | 8.68e-08 | 145 |
primitive gut | 8.68e-08 | 145 |
segment of respiratory tract | 1.33e-07 | 47 |
compound organ | 1.97e-07 | 68 |
respiratory primordium | 4.47e-07 | 38 |
endoderm of foregut | 4.47e-07 | 38 |
endoderm-derived structure | 4.64e-07 | 160 |
endoderm | 4.64e-07 | 160 |
presumptive endoderm | 4.64e-07 | 160 |
muscle structure | 5.18e-07 | 2 |
muscle organ | 5.18e-07 | 2 |
primary circulatory organ | 8.30e-07 | 27 |
throat | 9.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.66e-07 | 2 |