FFCP PHASE1:Hg19::chr10:121296048..121296068,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:121296048..121296068,-
|short_description=p3@RGS10
|description=CAGE_peak_3_at_RGS10_5end
|association_with_transcript=-3bp_to_ENST00000392865,NM_002925,u...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6001 | |EntrezGene=6001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9992 | |HGNC=9992 | ||
|TSSclassifier=strong | |||
|UniProt=O43665 | |UniProt=O43665 | ||
|association_with_transcript=-3bp_to_ENST00000392865,NM_002925,uc001lef.2_5end | |||
|cluster_id=chr10:121296048..121296068,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_RGS10_5end | |||
|id=chr10:121296048..121296068,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;5.65e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,5.49e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.03e-11;3!UBERON:0003057;5.03e-11;3!UBERON:0006601;1.31e-08;82!UBERON:0004872;1.48e-07;7!UBERON:0007297;1.61e-07;2!UBERON:0006965;2.38e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-85!115;UBERON:0001049!3.39e-50!57;UBERON:0005068!3.39e-50!57;UBERON:0006241!3.39e-50!57;UBERON:0007135!3.39e-50!57;UBERON:0002616!1.56e-40!59;UBERON:0001017!3.72e-40!82;UBERON:0003080!1.70e-39!42;UBERON:0005743!2.91e-39!86;UBERON:0002780!2.70e-38!41;UBERON:0001890!2.70e-38!41;UBERON:0006240!2.70e-38!41;UBERON:0003075!1.03e-37!86;UBERON:0007284!1.03e-37!86;UBERON:0000955!1.06e-37!69;UBERON:0006238!1.06e-37!69;UBERON:0000073!1.16e-35!94;UBERON:0001016!1.16e-35!94;UBERON:0002346!2.66e-35!90;UBERON:0001893!6.48e-32!34;UBERON:0002020!3.06e-31!34;UBERON:0003528!3.06e-31!34;UBERON:0002791!1.97e-30!33;UBERON:0001869!7.20e-29!32;UBERON:0003056!8.87e-27!61;UBERON:0002619!9.91e-26!22;UBERON:0000153!1.36e-24!129;UBERON:0007811!1.36e-24!129;UBERON:0001950!1.04e-22!20;UBERON:0000033!4.13e-22!123;UBERON:0000956!5.49e-22!25;UBERON:0000203!5.49e-22!25;UBERON:0004121!2.22e-19!169;UBERON:0000924!1.57e-18!173;UBERON:0006601!1.57e-18!173;UBERON:0004111!2.86e-13!241;UBERON:0000025!3.09e-13!194;UBERON:0002298!1.19e-12!8;UBERON:0000062!2.21e-12!511;UBERON:0000477!1.07e-11!286;UBERON:0003076!1.39e-11!15;UBERON:0003057!1.39e-11!15;UBERON:0002308!9.77e-11!9;UBERON:0000125!9.77e-11!9;UBERON:0000064!3.43e-10!219;UBERON:0001871!7.07e-10!7;UBERON:0000481!5.37e-09!347;UBERON:0004732!9.80e-09!13;UBERON:0001872!1.17e-08!5;UBERON:0002420!1.58e-08!9;UBERON:0007245!1.58e-08!9;UBERON:0010009!1.58e-08!9;UBERON:0010011!1.58e-08!9;UBERON:0000454!1.58e-08!9;UBERON:0000475!1.85e-08!365;UBERON:0000922!2.24e-08!612;UBERON:0009663!2.35e-08!7;UBERON:0000468!5.87e-08!659;UBERON:0001894!1.05e-07!7;UBERON:0006222!1.05e-07!7;UBERON:0000467!1.25e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0004733!1.48e-07!12;UBERON:0002028!1.48e-07!12;UBERON:0007277!1.48e-07!12;UBERON:0000483!1.54e-07!309;UBERON:0002050!2.23e-07!605;UBERON:0005423!2.23e-07!605;UBERON:0000119!2.61e-07!312;UBERON:0000923!4.93e-07!604;UBERON:0005291!4.93e-07!604;UBERON:0006598!4.93e-07!604;UBERON:0002532!4.93e-07!604;UBERON:0000200!5.31e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.45e-31;34!UBERON:0002780;4.15e-29;41!UBERON:0001890;4.15e-29;41!UBERON:0002619;4.64e-29;22!UBERON:0002791;8.09e-29;32!UBERON:0001869;4.12e-28;32!UBERON:0000073;8.64e-27;53!UBERON:0002616;8.64e-27;53!UBERON:0000956;2.90e-25;25!UBERON:0000203;2.90e-25;25!UBERON:0003528;5.29e-25;34!UBERON:0002020;5.29e-25;34!UBERON:0001950;5.77e-24;20!UBERON:0001017;2.54e-19;75!UBERON:0000955;3.54e-17;68!UBERON:0007023;5.69e-15;114!UBERON:0001016;6.42e-15;83!UBERON:0001871;1.63e-11;6!UBERON:0002240;5.03e-11;3!UBERON:0005174;5.03e-11;3!UBERON:0001137;5.03e-11;3!UBERON:0000349;1.28e-10;5!UBERON:0001896;2.56e-10;3!UBERON:0005290;2.56e-10;3!UBERON:0011216;6.94e-10;132!UBERON:0002420;4.29e-09;9!UBERON:0007245;4.29e-09;9!UBERON:0010009;4.29e-09;9!UBERON:0010011;4.29e-09;9!UBERON:0000454;4.29e-09;9!UBERON:0002298;4.53e-09;6!UBERON:0004732;2.28e-08;13!UBERON:0009663;5.41e-08;7!UBERON:0005162;1.10e-07;2!UBERON:0000122;1.10e-07;2!UBERON:0001954;1.39e-07;2!UBERON:0003022;1.39e-07;2!UBERON:0002421;1.39e-07;2!UBERON:0002600;1.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.76e-52,56;UBERON:0005068,7.76e-52,56;UBERON:0006241,7.76e-52,56;UBERON:0007135,7.76e-52,56;UBERON:0000073,2.23e-44,53;UBERON:0002616,2.23e-44,53;UBERON:0007023,2.08e-43,114;UBERON:0001017,1.52e-40,81;UBERON:0002780,6.87e-40,41;UBERON:0001890,6.87e-40,41;UBERON:0003080,6.87e-40,41;UBERON:0006240,6.87e-40,41;UBERON:0001016,6.16e-38,89;UBERON:0000955,6.95e-38,68;UBERON:0006238,6.95e-38,68;UBERON:0001893,2.74e-37,34;UBERON:0003075,3.54e-35,82;UBERON:0007284,3.54e-35,82;UBERON:0002346,3.72e-33,86;UBERON:0001869,3.88e-32,32;UBERON:0002791,4.33e-32,32;UBERON:0003528,5.80e-30,34;UBERON:0002020,5.80e-30,34;UBERON:0002619,2.27e-29,22;UBERON:0010371,8.34e-28,104;UBERON:0003056,3.60e-27,61;UBERON:0000956,1.55e-25,25;UBERON:0000203,1.55e-25,25;UBERON:0001950,3.53e-24,20;UBERON:0010314,1.30e-21,132;UBERON:0011216,1.47e-18,223;UBERON:0004121,7.92e-17,171;UBERON:0000924,7.92e-17,171;UBERON:0006601,7.92e-17,171;UBERON:0000025,3.68e-13,192;UBERON:0003076,9.94e-13,15;UBERON:0003057,9.94e-13,15;UBERON:0001871,1.29e-11,6;UBERON:0000349,6.01e-11,5;UBERON:0002240,6.07e-11,3;UBERON:0005174,6.07e-11,3;UBERON:0001137,6.07e-11,3;UBERON:0004111,2.76e-10,240;UBERON:0001896,4.29e-10,3;UBERON:0005290,4.29e-10,3;UBERON:0010096,4.29e-10,3;UBERON:0002420,3.55e-09,9;UBERON:0007245,3.55e-09,9;UBERON:0010009,3.55e-09,9;UBERON:0010011,3.55e-09,9;UBERON:0000454,3.55e-09,9;UBERON:0002298,6.37e-09,6;UBERON:0004732,3.27e-08,13;UBERON:0009663,5.52e-08,7;UBERON:0001954,1.02e-07,2;UBERON:0003022,1.02e-07,2;UBERON:0002421,1.02e-07,2;UBERON:0002600,1.02e-07,2;UBERON:0005162,1.09e-07,2;UBERON:0000122,1.09e-07,2;UBERON:0000483,2.08e-07,306;UBERON:0000119,2.99e-07,309;UBERON:0000922,4.35e-07,592;UBERON:0000923,4.76e-07,560;UBERON:0010316,4.76e-07,560;UBERON:0005291,4.76e-07,560;UBERON:0006598,4.76e-07,560;UBERON:0010317,4.76e-07,560;UBERON:0002532,4.76e-07,560;UBERON:0002050,6.57e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37397138175818,2.26725566213286,2.57575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7235483311913,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,1.82870241333667,0,0,0,1.39473591775749,1.93398740871803,0.251932747854276,0,0,0,0,0,0.511572370226872,0.394573622547734,0,0,9.69332746095218,2.69027484669369,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.60298219312704,0,0.331737779793674,1.18219047581419,2.4132393686937,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.22206028986725,0,0,0,7.54892689383583,0.802577647298789,11.0104289490909,0,0,0,0.789168805698781,2.41981432097328,2.14250933141343,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,4.36844492095563,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,0.410716136675979,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,1.59045937961861,4.76711921390515,0,0,0.415440338029185,1.349843349309,0.77380195455795,3.88797162611358,0,0.315222829196793,0.262272940674991,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.92562821219883,0,0,0.213574825135389,0.314408610199332,0.414239055347196,2.97699613087171,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,1.46431517882356,0.625954653532499,1.14681839138014,1.33114861844223,5.09190504119344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95454435443714,0,2.07524016774297,4.92279274177812,0.504143392443436,2.6971328461045,2.58361033010962,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,2.43135304626221,0.781078098613847,0.826747186004736,2.85371145872581,1.64092442705466,0.548257766857182,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,3.99160665731875,0,0,5.3696089051697,3.28863867814245,0,0,1.02041020705668,2.19961825882403,0,0.913158720509496,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.615976841137482,2.3196288626764,1.45713297917742,0,0,0,0,0.659643100472575,0,1.54348316215889,1.31135736302374,0,0,0,2.55201007249429,7.12911360785006,2.113278637917,0,0.563903507879121,1.28915775947154,0,0,0,0,1.46067277649303,0,2.15009374727177,0,4.41944686240946,0.436350690340377,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0.829169439458779,1.44806194206653,0.639701945702943,1.1903221573187,0.516711278688049,0.434523000071005,0,0,0,0.435433495793923,0.684466602170562,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37397138175818,2.26725566213286,2.57575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7235483311913,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,1.82870241333667,0,0,0,1.39473591775749,1.93398740871803,0.251932747854276,0,0,0,0,0,0.511572370226872,0.394573622547734,0,0,9.69332746095218,2.69027484669369,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.60298219312704,0,0.331737779793674,1.18219047581419,2.4132393686937,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.22206028986725,0,0,0,7.54892689383583,0.802577647298789,11.0104289490909,0,0,0,0.789168805698781,2.41981432097328,2.14250933141343,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.387956065953678,0,1.35588444468319,0,0,4.36844492095563,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,0.410716136675979,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,1.59045937961861,4.76711921390515,0,0,0.415440338029185,1.349843349309,0.77380195455795,3.88797162611358,0,0.315222829196793,0.262272940674991,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.92562821219883,0,0,0.213574825135389,0.314408610199332,0.414239055347196,2.97699613087171,0,0,0,0,0.5013797880454,0.612691153526923,0,0,0,1.46431517882356,0.625954653532499,1.14681839138014,1.33114861844223,5.09190504119344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95454435443714,0,2.07524016774297,4.92279274177812,0.504143392443436,2.6971328461045,2.58361033010962,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,2.43135304626221,0.781078098613847,0.826747186004736,2.85371145872581,1.64092442705466,0.548257766857182,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,3.99160665731875,0,0,5.3696089051697,3.28863867814245,0,0,1.02041020705668,2.19961825882403,0,0.913158720509496,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.615976841137482,2.3196288626764,1.45713297917742,0,0,0,0,0.659643100472575,0,1.54348316215889,1.31135736302374,0,0,0,2.55201007249429,7.12911360785006,2.113278637917,0,0.563903507879121,1.28915775947154,0,0,0,0,1.46067277649303,0,2.15009374727177,0,4.41944686240946,0.436350690340377,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0.829169439458779,1.44806194206653,0.639701945702943,1.1903221573187,0.516711278688049,0.434523000071005,0,0,0,0.435433495793923,0.684466602170562,0.5388164241167,0.358611026963382,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0.665756774185513,2.01273793591026,0 | ||
|short_description=p3@RGS10 | |||
}} | }} |
Latest revision as of 17:38, 16 September 2015
Short description: | p3@RGS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGS10_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -3bp_to_ENST00000392865, NM_002925, uc001lef.2_5end |
EntrezGene: | RGS10 |
HGNC: | 9992 |
UniProt: | O43665 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 5.49e-11 | 3 |