FFCP PHASE1:Hg19::chr9:140506839..140506847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92714 | |EntrezGene=92714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28633 | |HGNC=28633 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000497877_5end | |||
|cluster_id=chr9:140506839..140506847,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_9_at_ARRDC1_5end | |||
|id=chr9:140506839..140506847,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.25e-18!254;CL:0002076!1.78e-11!43;CL:0000223!4.08e-10!59;CL:0002327!1.00e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:305!7.36e-13!106;DOID:0050687!8.28e-12!143;DOID:5093!9.80e-09!4;DOID:1612!9.80e-09!4;DOID:162!2.76e-08!235;DOID:14566!5.99e-08!239;DOID:299!2.87e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.83e-66;4!DOID:1612;2.83e-66;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.40e-66,4;DOID:1612,2.40e-66,4;DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-12!9;UBERON:0004119!3.18e-09!169;UBERON:0000925!3.18e-09!169;UBERON:0006595!3.18e-09!169;UBERON:0001911!1.00e-08!4;UBERON:0005333!1.00e-08!4;UBERON:0008425!1.00e-08!4;UBERON:0005311!1.00e-08!4;UBERON:0000065!1.55e-08!53;UBERON:0001007!4.78e-08!155;UBERON:0001555!4.78e-08!155;UBERON:0007026!4.78e-08!155;UBERON:0008947!5.07e-08!38;UBERON:0003258!5.07e-08!38;UBERON:0001004!1.42e-07!72;UBERON:0001557!2.09e-07!19;UBERON:0005153!4.90e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.22e-27;10!UBERON:0001443;5.16e-25;11!UBERON:0001911;7.35e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.08e-27,10;UBERON:0001443,4.86e-25,11;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000076,1.24e-09,8 | |||
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| ||
|short_description=p9@ARRDC1 | |||
}} | }} |
Latest revision as of 17:36, 16 September 2015
Short description: | p9@ARRDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARRDC1_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -56bp_to_ENST00000497877_5end |
EntrezGene: | ARRDC1 |
HGNC: | 28633 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
breast | 2.08e-27 | 10 |
chest | 4.86e-25 | 11 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
external ectoderm | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.40e-66 | 4 |
breast cancer | 2.40e-66 | 4 |
disease of anatomical entity | 6.60e-08 | 39 |