FFCP PHASE1:Hg19::chr11:129245763..129245768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8538 | |EntrezGene=8538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=956 | |HGNC=956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMQ3 | |UniProt=Q9UMQ3 | ||
|association_with_transcript=-66bp_to_ENST00000281437_5end | |association_with_transcript=-66bp_to_ENST00000281437_5end | ||
|cluster_id=chr11:129245763..129245768,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_4_at_BARX2_5end | |description=CAGE_peak_4_at_BARX2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.67e-23;1!UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2 | |ontology_enrichment_development_v019=UBERON:0006298;3.67e-23;1!UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2 | ||
|ontology_enrichment_disease=DOID:4074!2.83e-07!2;DOID:4905!2.83e-07!2;DOID:3498!2.83e-07!2 | |ontology_enrichment_disease=DOID:4074!2.83e-07!2;DOID:4905!2.83e-07!2;DOID:3498!2.83e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001723;4.83e-30;3!UBERON:0001033;4.83e-30;3!UBERON:0001736;3.67e-23;1!UBERON:0002331;9.81e-21;10!UBERON:0001044;1.41e-15;6!UBERON:0003293;1.41e-15;6!UBERON:0003294;1.41e-15;6!UBERON:0010047;1.41e-15;6!UBERON:0003408;1.41e-15;6!UBERON:0000167;1.41e-15;6!UBERON:0001041;9.51e-15;14!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000165;6.37e-13;28!UBERON:0001829;2.74e-12;2!UBERON:0000478;4.86e-09;24!UBERON:0000922;5.95e-09;49!UBERON:0002390;5.34e-07;32!UBERON:0002346;8.85e-07;4!UBERON:0000923;8.85e-07;4!UBERON:0010316;8.85e-07;4!UBERON:0005291;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001723;4.83e-30;3!UBERON:0001033;4.83e-30;3!UBERON:0001736;3.67e-23;1!UBERON:0002331;9.81e-21;10!UBERON:0001044;1.41e-15;6!UBERON:0003293;1.41e-15;6!UBERON:0003294;1.41e-15;6!UBERON:0010047;1.41e-15;6!UBERON:0003408;1.41e-15;6!UBERON:0000167;1.41e-15;6!UBERON:0001041;9.51e-15;14!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000165;6.37e-13;28!UBERON:0001829;2.74e-12;2!UBERON:0000478;4.86e-09;24!UBERON:0000922;5.95e-09;49!UBERON:0002390;5.34e-07;32!UBERON:0002346;8.85e-07;4!UBERON:0000923;8.85e-07;4!UBERON:0010316;8.85e-07;4!UBERON:0005291;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.84e-30,3;UBERON:0001033,4.84e-30,3;UBERON:0010056,4.84e-30,3;UBERON:0001736,2.10e-23,1;UBERON:0006298,2.10e-23,1;UBERON:0002331,9.82e-21,10;UBERON:0000358,9.82e-21,10;UBERON:0000307,9.82e-21,10;UBERON:0000091,9.82e-21,10;UBERON:0000087,9.82e-21,10;UBERON:0007010,9.82e-21,10;UBERON:0007806,9.82e-21,10;UBERON:0008780,9.82e-21,10;UBERON:0005728,9.82e-21,10;UBERON:0000166,2.25e-16,22;UBERON:0001044,1.13e-15,6;UBERON:0003293,1.13e-15,6;UBERON:0003294,1.13e-15,6;UBERON:0010047,1.13e-15,6;UBERON:0000167,1.13e-15,6;UBERON:0000178,4.52e-14,15;UBERON:0000179,4.52e-14,15;UBERON:0000463,4.52e-14,15;UBERON:0000165,1.57e-12,29;UBERON:0000930,1.57e-12,29;UBERON:0001829,2.07e-12,2;UBERON:0000161,3.59e-10,36;UBERON:0003408,8.46e-10,10;UBERON:0001042,9.65e-10,10;UBERON:0009145,9.65e-10,10;UBERON:0000478,4.86e-09,24;UBERON:0006562,6.10e-09,11;UBERON:0001444,1.45e-07,49 | |||
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| ||
|short_description=p4@BARX2 | |short_description=p4@BARX2 | ||
}} | }} |
Latest revision as of 17:26, 16 September 2015
Short description: | p4@BARX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BARX2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -66bp_to_ENST00000281437_5end |
EntrezGene: | BARX2 |
HGNC: | 956 |
UniProt: | Q9UMQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.84e-30 | 3 |
gustatory system | 4.84e-30 | 3 |
future tongue | 4.84e-30 | 3 |
submandibular gland | 2.10e-23 | 1 |
submandibular gland primordium | 2.10e-23 | 1 |
umbilical cord | 9.82e-21 | 10 |
blastocyst | 9.82e-21 | 10 |
blastula | 9.82e-21 | 10 |
bilaminar disc | 9.82e-21 | 10 |
inner cell mass | 9.82e-21 | 10 |
cleaving embryo | 9.82e-21 | 10 |
connecting stalk | 9.82e-21 | 10 |
inner cell mass derived epiblast | 9.82e-21 | 10 |
extraembryonic mesoderm | 9.82e-21 | 10 |
oral opening | 2.25e-16 | 22 |
saliva-secreting gland | 1.13e-15 | 6 |
gland of oral region | 1.13e-15 | 6 |
gland of foregut | 1.13e-15 | 6 |
oral gland | 1.13e-15 | 6 |
oral cavity | 1.13e-15 | 6 |
blood | 4.52e-14 | 15 |
haemolymphatic fluid | 4.52e-14 | 15 |
organism substance | 4.52e-14 | 15 |
mouth | 1.57e-12 | 29 |
stomodeum | 1.57e-12 | 29 |
major salivary gland | 2.07e-12 | 2 |
orifice | 3.59e-10 | 36 |
gland of gut | 8.46e-10 | 10 |
chordate pharynx | 9.65e-10 | 10 |
pharyngeal region of foregut | 9.65e-10 | 10 |
extraembryonic structure | 4.86e-09 | 24 |
pharynx | 6.10e-09 | 11 |
subdivision of head | 1.45e-07 | 49 |