FFCP PHASE1:Hg19::chr16:46655208..46655316,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79801 | |EntrezGene=79801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29547 | |HGNC=29547 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEM2 | |UniProt=Q8NEM2 | ||
|association_with_transcript=0bp_to_NM_024745,uc002eec.3_5end | |association_with_transcript=0bp_to_NM_024745,uc002eec.3_5end | ||
|cluster_id=chr16:46655208..46655316,- | |||
|coexpression_cluster_id=C1026 | |coexpression_cluster_id=C1026 | ||
|description=CAGE_peak_1_at_SHCBP1_5end | |description=CAGE_peak_1_at_SHCBP1_5end | ||
|id=chr16:46655208..46655316,- | |id=chr16:46655208..46655316,- | ||
|ontology_enrichment_celltype=CL:0000548!7.02e-26!679;CL:0000004!7.02e-26!679;CL:0000255!7.02e-26!679;CL:0000012!1.43e-25!682;CL:0000003!1.80e-16!722;CL:0000055!9.12e-14!180;CL:0000144!5.48e-13!625;CL:0000063!1.29e-11!578;CL:0002371!1.59e-09!591;CL:0000066!5.73e-09!254;CL:0002321!4.97e-08!248;CL:0000220!7.14e-08!246;CL:0000057!1.01e-07!75 | |ontology_enrichment_celltype=CL:0000548!7.02e-26!679;CL:0000004!7.02e-26!679;CL:0000255!7.02e-26!679;CL:0000012!1.43e-25!682;CL:0000003!1.80e-16!722;CL:0000055!9.12e-14!180;CL:0000144!5.48e-13!625;CL:0000063!1.29e-11!578;CL:0002371!1.59e-09!591;CL:0000066!5.73e-09!254;CL:0002321!4.97e-08!248;CL:0000220!7.14e-08!246;CL:0000057!1.01e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.13e-09,253;CL:0002321,4.48e-08,250;CL:0000057,2.54e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.88e-34!235;DOID:14566!1.26e-33!239;DOID:0050686!2.64e-17!137;DOID:2531!2.41e-16!51;DOID:0060083!2.41e-16!51;DOID:0050687!1.23e-13!143;DOID:1240!7.78e-13!39;DOID:305!1.42e-10!106;DOID:8692!2.95e-10!31 | |ontology_enrichment_disease=DOID:162!2.88e-34!235;DOID:14566!1.26e-33!239;DOID:0050686!2.64e-17!137;DOID:2531!2.41e-16!51;DOID:0060083!2.41e-16!51;DOID:0050687!1.23e-13!143;DOID:1240!7.78e-13!39;DOID:305!1.42e-10!106;DOID:8692!2.95e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.15e-10;39!DOID:2531;3.94e-10;51!DOID:0060083;3.94e-10;51!DOID:8692;4.60e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.58e-34,235;DOID:14566,1.14e-33,239;DOID:0050686,3.41e-17,137;DOID:2531,1.24e-16,51;DOID:0060083,1.24e-16,51;DOID:0050687,1.26e-13,143;DOID:1240,4.67e-13,39;DOID:305,1.65e-10,106;DOID:8692,1.99e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.24e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!8.24e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.27e-07;9!UBERON:0001557;6.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.49e-07,9 | |||
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| ||
|short_description=p1@SHCBP1 | |short_description=p1@SHCBP1 | ||
}} | }} |
Latest revision as of 17:13, 16 September 2015
Short description: | p1@SHCBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHCBP1_5end |
Coexpression cluster: | C1026_Fibroblast_mesothelioma_Chondrocyte_epidermoid_Reticulocytes_clear_myxofibrosarcoma |
Association with transcript: | 0bp_to_NM_024745, uc002eec.3_5end |
EntrezGene: | SHCBP1 |
HGNC: | 29547 |
UniProt: | Q8NEM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.13e-09 | 253 |
embryonic cell | 4.48e-08 | 250 |
fibroblast | 2.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.58e-34 | 235 |
disease of cellular proliferation | 1.14e-33 | 239 |
organ system cancer | 3.41e-17 | 137 |
hematologic cancer | 1.24e-16 | 51 |
immune system cancer | 1.24e-16 | 51 |
cell type cancer | 1.26e-13 | 143 |
leukemia | 4.67e-13 | 39 |
carcinoma | 1.65e-10 | 106 |
myeloid leukemia | 1.99e-10 | 31 |