FFCP PHASE1:Hg19::chr17:60759119..60759136,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16875 | |||
|TSSclassifier=strong | |||
|UniProt=E7EME3 | |||
|association_with_transcript=300bp_to_ENST00000446119,uc002jaf.2_5end | |||
|cluster_id=chr17:60759119..60759136,+ | |||
|coexpression_cluster_id=C2375 | |||
|description=CAGE_peak_8_at_MRC2_5end | |||
|id=chr17:60759119..60759136,+ | |||
|ontology_enrichment_celltype=CL:0000764!1.71e-13!2;CL:0000765!1.71e-13!2;CL:0000050!1.71e-13!2;CL:0000038!1.71e-13!2;CL:0000558!1.71e-13!2;CL:0000547!1.71e-13!2;CL:0000549!1.71e-13!2;CL:0000550!1.71e-13!2;CL:0000552!1.71e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.84e-23;2!CL:0000558;6.84e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.65e-23,2;CL:0000765,7.65e-23,2;CL:0000050,7.65e-23,2;CL:0000038,7.65e-23,2;CL:0000558,7.65e-23,2;CL:0000547,7.65e-23,2;CL:0000549,7.65e-23,2;CL:0000550,7.65e-23,2;CL:0000552,7.65e-23,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.18e-19!8;DOID:8692!1.41e-11!31;DOID:1240!5.81e-09!39;DOID:8552!3.62e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.38e-23;8!DOID:8692;3.02e-09;31!DOID:1240;6.04e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.39e-23,8;DOID:8692,6.27e-09,31;DOID:1240,4.54e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.28e-32!15;UBERON:0000179!1.28e-32!15;UBERON:0000463!1.28e-32!15;UBERON:0004177!3.62e-08!7;UBERON:0007023!1.02e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.83e-46;15!UBERON:0000179;1.83e-46;15!UBERON:0000463;1.83e-46;15!UBERON:0002390;8.77e-26;32!UBERON:0002193;4.84e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-46,15;UBERON:0000179,1.73e-46,15;UBERON:0000463,1.73e-46,15;UBERON:0007023,2.09e-08,114;UBERON:0002390,5.67e-08,98;UBERON:0003061,5.67e-08,98;UBERON:0002193,3.90e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,2.0914836081992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5968189200182,12.234195314278,5.12682468456746,1.42939065274673,0.822724546172388,1.94541993357815,5.94034580961926,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,5.63989151542952,7.05825123543862,7.21632823996124,5.88236571444974,0.476809736941136,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,1.25763444079733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,1.99819452718089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MRC2 | |||
}} |
Latest revision as of 16:23, 16 September 2015
Short description: | p8@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MRC2_5end |
Coexpression cluster: | C2375_Whole_chronic_Neutrophils_blood_Reticulocytes_liver_acute |
Association with transcript: | 300bp_to_ENST00000446119, uc002jaf.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | E7EME3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.65e-23 | 2 |
erythroblast | 7.65e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 7.65e-23 | 2 |
erythroid progenitor cell | 7.65e-23 | 2 |
reticulocyte | 7.65e-23 | 2 |
proerythroblast | 7.65e-23 | 2 |
basophilic erythroblast | 7.65e-23 | 2 |
polychromatophilic erythroblast | 7.65e-23 | 2 |
orthochromatic erythroblast | 7.65e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-46 | 15 |
haemolymphatic fluid | 1.73e-46 | 15 |
organism substance | 1.73e-46 | 15 |
adult organism | 2.09e-08 | 114 |
hematopoietic system | 5.67e-08 | 98 |
blood island | 5.67e-08 | 98 |
hemolymphoid system | 3.90e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.39e-23 | 8 |
myeloid leukemia | 6.27e-09 | 31 |
leukemia | 4.54e-07 | 39 |