FFCP PHASE1:Hg19::chr3:170139006..170139041,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:170139006..170139041,+
|short_description=p3@CLDN11
|description=CAGE_peak_3_at_CLDN11_5end
|association_with_transcript=0bp_to_ENST00000468358,ENST0000047...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5010 | |EntrezGene=5010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8514 | |HGNC=8514 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468358,ENST00000471373,ENST00000489485,NM_001185056,uc003fgy.2_5end | |||
|cluster_id=chr3:170139006..170139041,+ | |||
|coexpression_cluster_id=C2731 | |||
|description=CAGE_peak_3_at_CLDN11_5end | |||
|id=chr3:170139006..170139041,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.22e-24!119;CL:0000183!1.80e-16!59;CL:0000055!6.68e-16!180;CL:0002139!2.32e-14!24;CL:0000680!2.63e-14!57;CL:0000056!2.63e-14!57;CL:0000355!2.63e-14!57;CL:0000187!6.91e-14!54;CL:0000115!3.90e-13!35;CL:0000057!1.24e-12!75;CL:0000213!8.07e-12!57;CL:0000215!8.07e-12!57;CL:0000192!1.59e-11!42;CL:0000514!1.59e-11!42;CL:0000393!6.01e-11!60;CL:0000211!6.01e-11!60;CL:0002078!1.55e-10!44;CL:0000071!5.20e-10!18;CL:0002546!5.20e-10!18;CL:0000359!3.63e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.89e-16;24!CL:0000115;2.95e-13;36!CL:0000071;3.09e-11;18!CL:0000192;2.92e-09;43!CL:0002078;6.13e-09;45!CL:0000213;7.98e-09;58!CL:0000215;7.98e-09;58!CL:0000359;1.02e-08;32!CL:0000187;3.95e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.75e-27,121;CL:0002139,4.49e-16,24;CL:0000115,6.84e-16,36;CL:0000680,3.73e-15,58;CL:0000056,3.73e-15,58;CL:0000355,3.73e-15,58;CL:0000187,4.48e-15,55;CL:0000213,1.26e-13,58;CL:0000215,1.26e-13,58;CL:0000192,5.72e-13,43;CL:0000514,5.72e-13,43;CL:0002078,2.69e-12,45;CL:0000393,6.18e-12,61;CL:0000211,6.18e-12,61;CL:0000071,3.50e-11,18;CL:0002546,3.50e-11,18;CL:0000057,6.54e-11,76;CL:0000359,4.55e-09,32;CL:0002321,1.30e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;3.09e-11;18!CL:0000514;2.92e-09;43!CL:0000222;1.81e-08;121!CL:0000355;3.49e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.80e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.42e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002049;7.62e-13;75!UBERON:0007798;7.62e-13;75!UBERON:0000055;3.19e-12;65!UBERON:0007500;2.26e-11;56!UBERON:0001981;2.26e-11;56!UBERON:0004537;2.26e-11;56!UBERON:0004638;3.09e-11;18!UBERON:0001986;3.09e-11;18!UBERON:0004852;3.09e-11;18!UBERON:0004573;2.52e-10;33!UBERON:0004571;2.52e-10;33!UBERON:0000487;3.54e-10;22!UBERON:0001637;5.23e-10;42!UBERON:0003509;5.23e-10;42!UBERON:0004572;5.23e-10;42!UBERON:0006914;1.19e-09;25!UBERON:0000073;1.35e-08;53!UBERON:0002616;1.35e-08;53!UBERON:0000947;1.87e-08;21!UBERON:0010191;1.87e-08;21!UBERON:0001473;6.29e-08;8!UBERON:0004536;6.29e-08;8!UBERON:0006558;6.29e-08;8!UBERON:0004732;9.45e-08;13!UBERON:0004535;1.15e-07;109!UBERON:0001009;1.86e-07;112!UBERON:0002780;2.92e-07;41!UBERON:0001890;2.92e-07;41!UBERON:0003914;3.54e-07;74!UBERON:0001893;5.81e-07;34!UBERON:0001017;5.92e-07;75!UBERON:0004733;5.98e-07;12!UBERON:0002028;5.98e-07;12!UBERON:0000955;8.48e-07;68 | |||
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| ||
|short_description=p3@CLDN11 | |||
}} | }} |
Latest revision as of 16:18, 16 September 2015
Short description: | p3@CLDN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN11_5end |
Coexpression cluster: | C2731_optic_Endothelial_small_corpus_Prostate_medulla_Pericytes |
Association with transcript: | 0bp_to_ENST00000468358, ENST00000471373, ENST00000489485, NM_001185056, uc003fgy.2_5end |
EntrezGene: | CLDN11 |
HGNC: | 8514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.75e-27 | 121 |
endothelial cell of vascular tree | 4.49e-16 | 24 |
endothelial cell | 6.84e-16 | 36 |
muscle precursor cell | 3.73e-15 | 58 |
myoblast | 3.73e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.73e-15 | 58 |
muscle cell | 4.48e-15 | 55 |
lining cell | 1.26e-13 | 58 |
barrier cell | 1.26e-13 | 58 |
smooth muscle cell | 5.72e-13 | 43 |
smooth muscle myoblast | 5.72e-13 | 43 |
meso-epithelial cell | 2.69e-12 | 45 |
electrically responsive cell | 6.18e-12 | 61 |
electrically active cell | 6.18e-12 | 61 |
blood vessel endothelial cell | 3.50e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-11 | 18 |
fibroblast | 6.54e-11 | 76 |
vascular associated smooth muscle cell | 4.55e-09 | 32 |
embryonic cell | 1.30e-07 | 250 |
Ontology term | p-value | n |
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