FFCP PHASE1:Hg19::chr2:27371879..27371907,+: Difference between revisions
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|id=chr2:27371879..27371907,+
|short_description=p1@TCF23
|description=CAGE_peak_1_at_TCF23_5end
|association_with_transcript=0bp_to_ENST00000407815_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150921 | |EntrezGene=150921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18602 | |HGNC=18602 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCD1 | |UniProt=B5MCD1 | ||
|association_with_transcript=0bp_to_ENST00000407815_5end | |||
|cluster_id=chr2:27371879..27371907,+ | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_1_at_TCF23_5end | |||
|id=chr2:27371879..27371907,+ | |||
|ontology_enrichment_celltype=CL:0002195!3.36e-10!2;CL:0002571!3.36e-10!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.75e-14;1!UBERON:0009117;1.09e-12;10!UBERON:0005564;1.09e-12;10!UBERON:0004872;1.62e-08;7!UBERON:0007297;5.37e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.10e-16!115;UBERON:0005057!1.07e-07!26;UBERON:0002106!1.78e-07!3;UBERON:0004854!1.78e-07!3;UBERON:0009034!1.78e-07!3;UBERON:0002095!1.78e-07!3;UBERON:0004782!1.78e-07!3;UBERON:0003281!1.78e-07!3;UBERON:0009664!1.78e-07!3;UBERON:0002296!1.78e-07!3;UBERON:0005602!1.78e-07!3;UBERON:0001179!1.78e-07!3;UBERON:0006293!1.78e-07!3;UBERON:0006947!2.09e-07!3;UBERON:0004054!2.09e-07!3;UBERON:0003135!2.96e-07!11;UBERON:0003978!6.14e-07!3;UBERON:0009751!6.14e-07!3;UBERON:0000946!6.14e-07!3;UBERON:0002523!6.14e-07!3;UBERON:0005983!6.14e-07!3;UBERON:0002165!6.14e-07!3;UBERON:0002062!6.14e-07!3;UBERON:0007280!6.14e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.30e-18;3!UBERON:0006834;4.73e-15;1!UBERON:0005795;6.22e-15;1!UBERON:0001301;1.07e-14;1!UBERON:0002079;2.75e-14;1!UBERON:0004177;1.46e-11;5!UBERON:0005057;1.46e-11;5!UBERON:0003135;1.64e-11;11!UBERON:0002081;8.60e-08;2!UBERON:0003133;1.11e-07;44!UBERON:0000473;1.35e-07;8!UBERON:0002323;3.82e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.36e-18,3;UBERON:0004854,1.36e-18,3;UBERON:0009034,1.36e-18,3;UBERON:0002095,1.36e-18,3;UBERON:0004782,1.36e-18,3;UBERON:0003281,1.36e-18,3;UBERON:0009664,1.36e-18,3;UBERON:0002296,1.36e-18,3;UBERON:0005602,1.36e-18,3;UBERON:0001179,1.36e-18,3;UBERON:0006293,1.36e-18,3;UBERON:0006834,4.73e-15,1;UBERON:0001301,1.07e-14,1;UBERON:0002079,2.41e-14,1;UBERON:0003135,1.58e-11,11;UBERON:0003886,1.65e-11,54;UBERON:0003887,1.47e-10,12;UBERON:0004457,1.91e-10,12;UBERON:0000042,1.91e-10,12;UBERON:0002553,3.99e-10,61;UBERON:0002323,4.30e-10,46;UBERON:0003133,8.35e-10,48;UBERON:0004458,1.87e-09,49;UBERON:0004177,1.65e-08,7;UBERON:0005057,1.65e-08,7;UBERON:0005156,6.53e-08,59;UBERON:0000990,6.53e-08,59;UBERON:0002081,8.04e-08,2;UBERON:0010227,8.04e-08,2;UBERON:0000473,1.31e-07,8;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0007023,9.92e-07,114 | |||
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|short_description=p1@TCF23 | |||
}} | }} |
Latest revision as of 16:15, 16 September 2015
Short description: | p1@TCF23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF23_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000407815_5end |
EntrezGene: | TCF23 |
HGNC: | 18602 |
UniProt: | B5MCD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.36e-18 | 3 |
gastrointestinal system mesentery | 1.36e-18 | 3 |
stomach region | 1.36e-18 | 3 |
mesentery | 1.36e-18 | 3 |
gastrointestinal system serosa | 1.36e-18 | 3 |
mesentery of stomach | 1.36e-18 | 3 |
gut mesentery | 1.36e-18 | 3 |
dorsal mesentery | 1.36e-18 | 3 |
dorsal mesogastrium | 1.36e-18 | 3 |
peritoneal cavity | 1.36e-18 | 3 |
spleen primordium | 1.36e-18 | 3 |
uterus or analog | 4.73e-15 | 1 |
epididymis | 1.07e-14 | 1 |
left cardiac atrium | 2.41e-14 | 1 |
male reproductive organ | 1.58e-11 | 11 |
body cavity precursor | 1.65e-11 | 54 |
intraembryonic coelom | 1.47e-10 | 12 |
cavity lining | 1.91e-10 | 12 |
serous membrane | 1.91e-10 | 12 |
anatomical cavity | 3.99e-10 | 61 |
body cavity | 4.30e-10 | 46 |
reproductive organ | 8.35e-10 | 48 |
body cavity or lining | 1.87e-09 | 49 |
hemopoietic organ | 1.65e-08 | 7 |
immune organ | 1.65e-08 | 7 |
reproductive structure | 6.53e-08 | 59 |
reproductive system | 6.53e-08 | 59 |
cardiac atrium | 8.04e-08 | 2 |
future cardiac atrium | 8.04e-08 | 2 |
testis | 1.31e-07 | 8 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
adult organism | 9.92e-07 | 114 |