FFCP PHASE1:Hg19::chr6:160769399..160769416,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10967 | |||
|TSSclassifier=strong | |||
|UniProt=Q96KH7,O75751,Q5SYN6 | |||
|association_with_transcript=-8bp_to_ENST00000392145,NM_021977,uc003qti.2,uc011efx.1_5end | |||
|cluster_id=chr6:160769399..160769416,+ | |||
|coexpression_cluster_id=C2852 | |||
|description=CAGE_peak_1_at_SLC22A3_5end | |||
|id=chr6:160769399..160769416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.55e-10;13!UBERON:0004161;2.11e-08;11!UBERON:0003104;2.89e-07;31 | |||
|ontology_enrichment_disease=DOID:2394!3.33e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.55e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.64e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!4.73e-26!347;UBERON:0007023!2.09e-23!115;UBERON:0000477!2.23e-20!286;UBERON:0004111!4.65e-19!241;UBERON:0000922!8.18e-18!612;UBERON:0000025!1.48e-17!194;UBERON:0002050!2.59e-16!605;UBERON:0005423!2.59e-16!605;UBERON:0000923!6.66e-16!604;UBERON:0005291!6.66e-16!604;UBERON:0006598!6.66e-16!604;UBERON:0002532!6.66e-16!604;UBERON:0000483!8.78e-16!309;UBERON:0000119!4.66e-15!312;UBERON:0000468!9.96e-15!659;UBERON:0000475!1.82e-14!365;UBERON:0003104!9.44e-14!238;UBERON:0009142!9.44e-14!238;UBERON:0003914!8.82e-12!118;UBERON:0000467!1.05e-11!625;UBERON:0001048!1.20e-11!168;UBERON:0000480!1.57e-11!626;UBERON:0004119!2.50e-11!169;UBERON:0000925!2.50e-11!169;UBERON:0006595!2.50e-11!169;UBERON:0004921!2.40e-10!129;UBERON:0004185!2.40e-10!129;UBERON:0000466!4.64e-10!126;UBERON:0009497!1.17e-09!25;UBERON:0000015!1.17e-09!25;UBERON:0002423!1.17e-09!25;UBERON:0006235!1.17e-09!25;UBERON:0004161!1.17e-09!25;UBERON:0001007!2.91e-09!155;UBERON:0001555!2.91e-09!155;UBERON:0007026!2.91e-09!155;UBERON:0009854!2.91e-09!23;UBERON:0002100!5.01e-09!216;UBERON:0008835!6.15e-09!22;UBERON:0003894!6.15e-09!22;UBERON:0005256!6.64e-09!143;UBERON:0009856!8.94e-09!26;UBERON:0007499!1.89e-08!25;UBERON:0000062!2.34e-08!511;UBERON:0003075!3.92e-08!86;UBERON:0007284!3.92e-08!86;UBERON:0000077!8.66e-08!130;UBERON:0000064!9.41e-08!219;UBERON:0002365!1.23e-07!31;UBERON:0002330!1.23e-07!31;UBERON:0001041!1.46e-07!98;UBERON:0002107!3.95e-07!19;UBERON:0006925!3.95e-07!19;UBERON:0008836!3.95e-07!19;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57;UBERON:0000490!4.64e-07!138;UBERON:0002346!5.82e-07!90;UBERON:0003103!6.46e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.71e-11;25!UBERON:0002365;5.52e-09;31!UBERON:0002330;5.52e-09;31!UBERON:0002107;9.93e-09;19!UBERON:0006925;9.93e-09;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.36e-17,114;UBERON:0004111,9.47e-14,240;UBERON:0001048,2.45e-13,160;UBERON:0004921,1.46e-12,118;UBERON:0003914,1.76e-12,117;UBERON:0004119,3.67e-12,160;UBERON:0000925,3.67e-12,160;UBERON:0006595,3.67e-12,160;UBERON:0000025,4.13e-12,192;UBERON:0000922,8.37e-12,592;UBERON:0005423,8.84e-12,581;UBERON:0009497,1.45e-11,25;UBERON:0000015,1.45e-11,25;UBERON:0002423,1.45e-11,25;UBERON:0006235,1.45e-11,25;UBERON:0004161,1.45e-11,25;UBERON:0009854,1.59e-11,23;UBERON:0002050,3.59e-11,564;UBERON:0000923,3.64e-11,560;UBERON:0010316,3.64e-11,560;UBERON:0005291,3.64e-11,560;UBERON:0006598,3.64e-11,560;UBERON:0010317,3.64e-11,560;UBERON:0002532,3.64e-11,560;UBERON:0008835,4.22e-11,22;UBERON:0003894,4.22e-11,22;UBERON:0001041,4.41e-11,87;UBERON:0009856,1.24e-10,26;UBERON:0007499,3.29e-10,25;UBERON:0001007,9.19e-10,145;UBERON:0001555,9.19e-10,145;UBERON:0007026,9.19e-10,145;UBERON:0003104,1.27e-09,160;UBERON:0009142,1.27e-09,160;UBERON:0002365,2.71e-09,31;UBERON:0002330,2.71e-09,31;UBERON:0005256,8.35e-09,122;UBERON:0002107,9.52e-09,19;UBERON:0006925,9.52e-09,19;UBERON:0008836,9.52e-09,19;UBERON:0000483,7.21e-08,306;UBERON:0011216,1.05e-07,223;UBERON:0000119,1.59e-07,309;UBERON:0002100,4.04e-07,199 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,3.00219895059391,1.34088328328186,1.74467704820074,0,1.26343974685366,11.7533532689927,5.40614660303319,0.697801167972428,0.436882744260345,1.05506791291381,0.247532705920093,0.994192127183747,1.34465029290355,1.20538905604795,1.46062018077475,3.90346239032406,0.492484232307152,0,2.5076377718247,0,0.136874425072884,0,0,0,0,0,0,0,0,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,3.35350429851818,0.767175371061182,0,0.50133791063589,1.01392563272577,0,1.94653948121054,0.756278537312543,1.55210578223795,1.22968699970376,5.30465255765736,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.529636723252875,2.0078563452417,2.12801029319014,0.560677600142307,3.20246987189115,5.18001851676036,3.11211035399766,1.21239604862719,2.61539044981534,1.96764655938411,1.72852777344,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,1.58805056424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,3.09217365061275,1.36373060295417,0,0.487894824518382,0.397589304964456,0.232387885739037,0.207322110030741,1.00928340350251,1.82488679537915,0,0,0,0,0,1.8929088006375,1.85443159085912,1.92808823906786,1.8749975364507,0.435758888184812,1.66089433377768,1.21348177344148,2.15843611637881,1.15424147083917,0,0,0.8231480226628,1.47008711385542,19.0132552232746,21.6221987669078,53.1710916013264,0,0.983907508344908,0.686271241194102,0.658501712451753,1.1240175325762,0.301586917234893,0.462942225792648,0,3.11980435583874,0,0.463721619900307,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0,0,0,27.6641471721644,0,0,0,0,0,0,0.266422179016099,3.57444984145369,42.867106825924,4.93944202068461,0,2.84313558994037,3.16780749173372,280.640060042475,103.712481573435,207.643902685132,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0,0,0.783204629850962,1.71571711905428,0,0,0,2.42502057157008,0,0.30239029332968,0.992431231275107,1.07423381301644,1.68396056659844,2.30650468660262,0.511707249066704,0.965123526861645,4.45254199334973,0,2.84098760501003,0.0821271560138091,0.519254429183621,0.116210378459959,0.604297247958111,3.40860999515584,5.70902131402557,0.114814448164607,0,0.262248829918848,0.451199612907412,0.15403067420883,1.56869953835371,1.46139224653261,1.68882606228601,0,0,0,0,10.5669110642103,6.52196706011309,0.509752546090077,0,1.11937377361089,0,0,0.256450125116389,3.60816110269676,1.62689197332152,12.983167467613,0,0,0.574265537996172,0,0,0.096670718292122,1.07834031980251,0.614014698904518,0.413509717453592,1.07420244868274,2.46528379654188,0.681813019328807,0.623224249527161,4.29740779938543,12.3001643113668,5.87018477475087,7.99146468758844,0,0.62962469366128,1.3940745403212,0.308033580176089,0.532306030317022,0,9.82218361250776,5.72499546967965,0.372158369359667,0.316379424718726,0,0,0,0.636406495851874,3.92474320099615,0.539617372749944,2.19629623788844,0.942499218765491,1.01091240786658,0,3.37006764991185,0,4.38684281336312,3.16950440270266,0,0,0,1.65409603063837,1.99031692572366,0.438450885253763,0,0,14.406636764352,14.2518809125885,1.40847801266121,1.00387946542836,2.35797698431491,13.5534999562875,1.06428319221179,0.211107635297664,0,0.379473173765715,0,0.962221127255121,2.68120910214315,1.08890984861323,17.040027940597,1.72202149068492,1.68471475667626,4.43430153536676,3.21612760289743,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4155729649014,3.66270448179735,0,0,0,0.71623345421307,0.296964680832639,0.921482106297696,1.9882952955326,0.844016498463076,0,0,0,59.5751484870698,2.48655523978033,0,0,0,0,7.54894149637545,17.9021174675609,0,3.94573622547734,0,0,1.93866549219044,0.649376687132959,0,0,0,6.52499617891314,0.796554137998498,0.254253650292766,0,0,0,0,1.77148277162768,1.08536794762867,1.52581736317083,2.32216445855572,1.77328571372128,2.63262476584767,0.10893846351899,4.87983104975112,10.8499864490354,6.38075512743207,0.23056390438806,0,0,1.91400695839152,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,9.95261931078505,2.83064206410685,4.888241159469,17.7912677208373,9.51442329888072,8.14491206142552,1.01101699471016,69.0216776676958,1.40558667435203,0,0.19566461893209,0,5.91876604274086,6.04953580243319,0,6.57140428136275,0.450970258243478,0,0,0,0,0,0,0,0,0.489961987071888,0.0870592065804026,16.7737601512349,0,0.870806981601766,0.584714536689484,0.739039113478883,5.334395906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| |||
|short_description=p1@SLC22A3 | |||
}} |
Latest revision as of 16:12, 16 September 2015
Short description: | p1@SLC22A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A3_5end |
Coexpression cluster: | C2852_mesenchymal_Mesothelial_skeletal_diaphragm_aorta_Hepatocyte_salivary |
Association with transcript: | -8bp_to_ENST00000392145, NM_021977, uc003qti.2, uc011efx.1_5end |
EntrezGene: | SLC22A3 |
HGNC: | 10967 |
UniProt: | Q96KH7O75751Q5SYN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.64e-09 | 14 |