FFCP PHASE1:Hg19::chr7:139044621..139044725,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:139044621..139044725,+ to FFCP PHASE1:Hg19::chr7:139044621..139044725,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51631 | |EntrezGene=51631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21608 | |HGNC=21608 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y383,F8WB41,F8WEU3 | |UniProt=Q9Y383,F8WB41,F8WEU3 | ||
|association_with_transcript=0bp_to_ENST00000354926,ENST00000435096,ENST00000456182,ENST00000545899,uc003vux.2,uc003vuy.2_5end | |||
|cluster_id=chr7:139044621..139044725,+ | |||
|description=CAGE_peak_1_at_LUC7L2_5end | |||
|id=chr7:139044621..139044725,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.29e-24!172;CL:0000566!8.29e-24!172;CL:0002032!2.38e-21!165;CL:0000837!2.38e-21!165;CL:0000988!2.58e-20!182;CL:0000738!2.47e-18!140;CL:0002031!1.62e-14!124;CL:0002087!2.91e-12!119;CL:0000542!1.29e-11!53;CL:0000051!1.29e-11!53;CL:0000838!3.87e-11!52;CL:0000763!1.77e-10!112;CL:0000049!1.77e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.59e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.56e-23,168;CL:0002032,4.44e-21,161;CL:0000837,4.44e-21,161;CL:0000988,1.21e-20,177;CL:0000738,4.31e-18,136;CL:0002031,2.78e-14,120;CL:0002087,5.02e-12,115;CL:0000542,1.29e-11,53;CL:0000051,1.29e-11,53;CL:0000838,3.87e-11,52;CL:0000763,3.03e-10,108;CL:0000049,3.03e-10,108 | |||
|ontology_enrichment_development_v019=CL:0000051;2.59e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!6.74e-08!51;DOID:0060083!6.74e-08!51;DOID:162!2.61e-07!235;DOID:1240!4.15e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.74e-08,51;DOID:0060083,6.74e-08,51;DOID:162,2.61e-07,235;DOID:1240,4.15e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.70e-12,114 | |||
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| ||
|short_description=p1@LUC7L2 | |||
}} | }} |
Latest revision as of 16:07, 16 September 2015
Short description: | p1@LUC7L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LUC7L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354926, ENST00000435096, ENST00000456182, ENST00000545899, uc003vux.2, uc003vuy.2_5end |
EntrezGene: | LUC7L2 |
HGNC: | 21608 |
UniProt: | Q9Y383F8WB41F8WEU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.56e-23 | 168 |
hematopoietic oligopotent progenitor cell | 4.44e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.44e-21 | 161 |
hematopoietic cell | 1.21e-20 | 177 |
leukocyte | 4.31e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.78e-14 | 120 |
nongranular leukocyte | 5.02e-12 | 115 |
lymphocyte | 1.29e-11 | 53 |
common lymphoid progenitor | 1.29e-11 | 53 |
lymphoid lineage restricted progenitor cell | 3.87e-11 | 52 |
myeloid cell | 3.03e-10 | 108 |
common myeloid progenitor | 3.03e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.70e-12 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.74e-08 | 51 |
immune system cancer | 6.74e-08 | 51 |
cancer | 2.61e-07 | 235 |
leukemia | 4.15e-07 | 39 |