FFCP PHASE1:Hg19::chr20:45985465..45985481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23613 | |EntrezGene=23613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9397 | |HGNC=9397 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULU4,Q569J9 | |UniProt=Q9ULU4,Q569J9 | ||
|association_with_transcript=0bp_to_NM_012408,NM_183047,NM_183048,uc002xss.2,uc002xtb.1,uc002xtc.1,uc002xtd.1,uc002xte.1,uc002xtf.1,uc002xth.2,uc010zxz.1,uc010zya.1_5end | |association_with_transcript=0bp_to_NM_012408,NM_183047,NM_183048,uc002xss.2,uc002xtb.1,uc002xtc.1,uc002xtd.1,uc002xte.1,uc002xtf.1,uc002xth.2,uc010zxz.1,uc010zya.1_5end | ||
|cluster_id=chr20:45985465..45985481,- | |||
|description=CAGE_peak_2_at_ZMYND8_5end | |description=CAGE_peak_2_at_ZMYND8_5end | ||
|id=chr20:45985465..45985481,- | |id=chr20:45985465..45985481,- | ||
|ontology_enrichment_celltype=CL:0000542!1.49e-07!53;CL:0000051!1.49e-07!53;CL:0000838!2.45e-07!52;CL:0000945!8.38e-07!24;CL:0000826!8.38e-07!24 | |ontology_enrichment_celltype=CL:0000542!1.49e-07!53;CL:0000051!1.49e-07!53;CL:0000838!2.45e-07!52;CL:0000945!8.38e-07!24;CL:0000826!8.38e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.95e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53;CL:0000838,2.44e-07,52;CL:0000945,8.36e-07,24;CL:0000826,8.36e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.49e-09!235;DOID:14566!1.09e-08!239;DOID:8692!9.34e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.57e-09,235;DOID:14566,9.36e-09,239;DOID:8692,9.32e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.66e-12!57;UBERON:0005068!3.66e-12!57;UBERON:0006241!3.66e-12!57;UBERON:0007135!3.66e-12!57;UBERON:0002346!4.63e-10!90;UBERON:0002780!8.14e-10!41;UBERON:0001890!8.14e-10!41;UBERON:0006240!8.14e-10!41;UBERON:0003080!1.27e-09!42;UBERON:0007023!1.64e-09!115;UBERON:0000073!1.84e-09!94;UBERON:0001016!1.84e-09!94;UBERON:0003075!3.27e-09!86;UBERON:0007284!3.27e-09!86;UBERON:0000955!4.38e-09!69;UBERON:0006238!4.38e-09!69;UBERON:0002616!5.23e-09!59;UBERON:0005743!6.49e-08!86;UBERON:0001017!8.98e-08!82;UBERON:0002020!1.91e-07!34;UBERON:0003528!1.91e-07!34;UBERON:0003056!2.56e-07!61;UBERON:0002791!4.90e-07!33;UBERON:0001893!6.04e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.02e-07;41!UBERON:0001890;1.02e-07;41!UBERON:0000073;1.18e-07;53!UBERON:0002616;1.18e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.38e-12,56;UBERON:0005068,2.38e-12,56;UBERON:0006241,2.38e-12,56;UBERON:0007135,2.38e-12,56;UBERON:0000073,1.72e-11,53;UBERON:0002616,1.72e-11,53;UBERON:0002346,5.46e-10,86;UBERON:0002780,8.11e-10,41;UBERON:0001890,8.11e-10,41;UBERON:0003080,8.11e-10,41;UBERON:0006240,8.11e-10,41;UBERON:0001016,2.22e-09,89;UBERON:0000955,3.66e-09,68;UBERON:0006238,3.66e-09,68;UBERON:0003075,3.90e-09,82;UBERON:0007284,3.90e-09,82;UBERON:0007023,4.03e-09,114;UBERON:0001017,8.00e-08,81;UBERON:0003056,8.23e-08,61;UBERON:0003528,1.90e-07,34;UBERON:0002020,1.90e-07,34;UBERON:0001893,6.03e-07,34 | |||
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| ||
|short_description=p2@ZMYND8 | |short_description=p2@ZMYND8 | ||
}} | }} |
Latest revision as of 15:47, 16 September 2015
Short description: | p2@ZMYND8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZMYND8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_012408, NM_183047, NM_183048, uc002xss.2, uc002xtb.1, uc002xtc.1, uc002xtd.1, uc002xte.1, uc002xtf.1, uc002xth.2, uc010zxz.1, uc010zya.1_5end |
EntrezGene: | ZMYND8 |
HGNC: | 9397 |
UniProt: | Q9ULU4Q569J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.44e-07 | 52 |
lymphocyte of B lineage | 8.36e-07 | 24 |
pro-B cell | 8.36e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.38e-12 | 56 |
neural rod | 2.38e-12 | 56 |
future spinal cord | 2.38e-12 | 56 |
neural keel | 2.38e-12 | 56 |
regional part of nervous system | 1.72e-11 | 53 |
regional part of brain | 1.72e-11 | 53 |
neurectoderm | 5.46e-10 | 86 |
regional part of forebrain | 8.11e-10 | 41 |
forebrain | 8.11e-10 | 41 |
anterior neural tube | 8.11e-10 | 41 |
future forebrain | 8.11e-10 | 41 |
nervous system | 2.22e-09 | 89 |
brain | 3.66e-09 | 68 |
future brain | 3.66e-09 | 68 |
neural plate | 3.90e-09 | 82 |
presumptive neural plate | 3.90e-09 | 82 |
adult organism | 4.03e-09 | 114 |
central nervous system | 8.00e-08 | 81 |
pre-chordal neural plate | 8.23e-08 | 61 |
brain grey matter | 1.90e-07 | 34 |
gray matter | 1.90e-07 | 34 |
telencephalon | 6.03e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.57e-09 | 235 |
disease of cellular proliferation | 9.36e-09 | 239 |
myeloid leukemia | 9.32e-07 | 31 |