FFCP PHASE1:Hg19::chrX:9880920..9880929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |||
|TSSclassifier=strong | |||
|UniProt=C9IZC6,B3KU73 | |||
|association_with_transcript=197bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | |||
|cluster_id=chrX:9880920..9880929,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_22_at_SHROOM2_5end | |||
|id=chrX:9880920..9880929,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.52e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.84e-57!57;UBERON:0005068!6.84e-57!57;UBERON:0006241!6.84e-57!57;UBERON:0007135!6.84e-57!57;UBERON:0001017!2.78e-53!82;UBERON:0001893!2.30e-51!34;UBERON:0001869!1.78e-50!32;UBERON:0005743!2.06e-50!86;UBERON:0002780!2.09e-49!41;UBERON:0001890!2.09e-49!41;UBERON:0006240!2.09e-49!41;UBERON:0002791!1.99e-48!33;UBERON:0003080!4.29e-48!42;UBERON:0002616!1.60e-47!59;UBERON:0002619!1.28e-45!22;UBERON:0000073!8.03e-45!94;UBERON:0001016!8.03e-45!94;UBERON:0000955!1.55e-44!69;UBERON:0006238!1.55e-44!69;UBERON:0000956!2.49e-44!25;UBERON:0000203!2.49e-44!25;UBERON:0002020!6.29e-43!34;UBERON:0003528!6.29e-43!34;UBERON:0003075!7.19e-40!86;UBERON:0007284!7.19e-40!86;UBERON:0001950!2.10e-39!20;UBERON:0002346!1.01e-37!90;UBERON:0003056!8.58e-34!61;UBERON:0004121!4.65e-30!169;UBERON:0000924!3.93e-29!173;UBERON:0006601!3.93e-29!173;UBERON:0000033!2.95e-28!123;UBERON:0000153!1.55e-26!129;UBERON:0007811!1.55e-26!129;UBERON:0007023!1.14e-25!115;UBERON:0001871!5.29e-21!7;UBERON:0000349!9.78e-18!5;UBERON:0000200!2.48e-14!6;UBERON:0001872!1.74e-11!5;UBERON:0000064!3.32e-11!219;UBERON:0002771!3.44e-11!3;UBERON:0000025!4.68e-11!194;UBERON:0001896!7.57e-11!3;UBERON:0005290!7.57e-11!3;UBERON:0010096!7.57e-11!3;UBERON:0002106!1.39e-10!3;UBERON:0004854!1.39e-10!3;UBERON:0009034!1.39e-10!3;UBERON:0002095!1.39e-10!3;UBERON:0004782!1.39e-10!3;UBERON:0003281!1.39e-10!3;UBERON:0009664!1.39e-10!3;UBERON:0002296!1.39e-10!3;UBERON:0005602!1.39e-10!3;UBERON:0001179!1.39e-10!3;UBERON:0006293!1.39e-10!3;UBERON:0003076!2.83e-10!15;UBERON:0003057!2.83e-10!15;UBERON:0000475!8.42e-10!365;UBERON:0004111!1.52e-09!241;UBERON:0000477!1.74e-09!286;UBERON:0002420!2.22e-09!9;UBERON:0007245!2.22e-09!9;UBERON:0010009!2.22e-09!9;UBERON:0010011!2.22e-09!9;UBERON:0000454!2.22e-09!9;UBERON:0001954!3.25e-08!2;UBERON:0003022!3.25e-08!2;UBERON:0002421!3.25e-08!2;UBERON:0002600!3.25e-08!2;UBERON:0000369!3.40e-08!4;UBERON:0002435!3.40e-08!4;UBERON:0000204!3.40e-08!4;UBERON:0010082!3.40e-08!4;UBERON:0000483!3.66e-08!309;UBERON:0001876!4.62e-08!2;UBERON:0000119!5.34e-08!312;UBERON:0002021!2.83e-07!5;UBERON:0002298!8.55e-07!8;UBERON:0004733!9.47e-07!12;UBERON:0002028!9.47e-07!12;UBERON:0007277!9.47e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.27e-34;3!UBERON:0004177;4.21e-21;5!UBERON:0005057;4.21e-21;5!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.27e-34,3;UBERON:0004854,4.27e-34,3;UBERON:0009034,4.27e-34,3;UBERON:0002095,4.27e-34,3;UBERON:0004782,4.27e-34,3;UBERON:0003281,4.27e-34,3;UBERON:0009664,4.27e-34,3;UBERON:0002296,4.27e-34,3;UBERON:0005602,4.27e-34,3;UBERON:0001179,4.27e-34,3;UBERON:0006293,4.27e-34,3;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0003887,1.22e-09,12;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.615349092722265,0.756215088665154,0.553258019713743,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.826747186004736,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,6.29629282327052,0,0,0,0,0,0,0,0.407948941145488,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@SHROOM2 | |||
}} |
Latest revision as of 15:44, 16 September 2015
Short description: | p22@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_SHROOM2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 197bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | C9IZC6B3KU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.27e-34 | 3 |
gastrointestinal system mesentery | 4.27e-34 | 3 |
stomach region | 4.27e-34 | 3 |
mesentery | 4.27e-34 | 3 |
gastrointestinal system serosa | 4.27e-34 | 3 |
mesentery of stomach | 4.27e-34 | 3 |
gut mesentery | 4.27e-34 | 3 |
dorsal mesentery | 4.27e-34 | 3 |
dorsal mesogastrium | 4.27e-34 | 3 |
peritoneal cavity | 4.27e-34 | 3 |
spleen primordium | 4.27e-34 | 3 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
intraembryonic coelom | 1.22e-09 | 12 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-11 | 10 |