FFCP PHASE1:Hg19::chrX:9880496..9880550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3B6 | |UniProt=F5H3B6 | ||
|association_with_transcript=84bp_to_ENST00000418909,uc004csv.2,uc011mic.1_5end | |association_with_transcript=84bp_to_ENST00000418909,uc004csv.2,uc011mic.1_5end | ||
|cluster_id=chrX:9880496..9880550,+ | |||
|description=CAGE_peak_2_at_SHROOM2_5end | |description=CAGE_peak_2_at_SHROOM2_5end | ||
|id=chrX:9880496..9880550,+ | |id=chrX:9880496..9880550,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.66e-12!43;CL:0002159!1.95e-10!13;CL:0002368!1.43e-08!13;CL:0000223!3.38e-07!59;CL:0002251!6.29e-07!21 | |ontology_enrichment_celltype=CL:0002076!5.66e-12!43;CL:0002159!1.95e-10!13;CL:0002368!1.43e-08!13;CL:0000223!3.38e-07!59;CL:0002251!6.29e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.27e-11;13!CL:0002076;4.88e-11;42!CL:0002159;2.14e-10;14!CL:0000244;4.81e-08;4!CL:0000731;4.81e-08;4!CL:0002251;7.93e-08;20!CL:0000240;7.03e-07;6!CL:0000311;7.03e-07;6!CL:0000079;7.03e-07;6!CL:0000237;7.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.00e-13,42;CL:0002368,4.85e-11,13;CL:0002159,2.19e-10,14;CL:0000223,5.23e-09,58;CL:0000244,4.50e-08,4;CL:0000731,4.50e-08,4;CL:0002251,9.57e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.39e-12;82!CL:0000357;7.03e-07;6!CL:0000114;7.03e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.63e-07!14 | |ontology_enrichment_disease=DOID:1749!1.63e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.59e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004121!3.31e-44!169;UBERON:0000924!1.88e-43!173;UBERON:0006601!1.88e-43!173;UBERON:0000153!6.86e-38!129;UBERON:0007811!6.86e-38!129;UBERON:0000033!2.04e-37!123;UBERON:0001017!4.28e-37!82;UBERON:0001049!4.66e-37!57;UBERON:0005068!4.66e-37!57;UBERON:0006241!4.66e-37!57;UBERON:0007135!4.66e-37!57;UBERON:0000073!6.84e-36!94;UBERON:0001016!6.84e-36!94;UBERON:0005743!1.91e-35!86;UBERON:0002780!4.06e-33!41;UBERON:0001890!4.06e-33!41;UBERON:0006240!4.06e-33!41;UBERON:0003080!5.53e-32!42;UBERON:0002020!1.43e-30!34;UBERON:0003528!1.43e-30!34;UBERON:0001893!1.52e-30!34;UBERON:0002616!4.29e-30!59;UBERON:0000955!4.33e-30!69;UBERON:0006238!4.33e-30!69;UBERON:0002791!1.69e-29!33;UBERON:0001869!3.55e-29!32;UBERON:0003075!4.58e-29!86;UBERON:0007284!4.58e-29!86;UBERON:0002346!5.65e-28!90;UBERON:0003056!7.05e-26!61;UBERON:0007023!7.54e-26!115;UBERON:0002619!4.62e-24!22;UBERON:0000956!1.23e-23!25;UBERON:0000203!1.23e-23!25;UBERON:0001950!4.49e-22!20;UBERON:0000064!1.38e-18!219;UBERON:0000475!3.71e-18!365;UBERON:0000922!1.06e-12!612;UBERON:0002050!1.69e-12!605;UBERON:0005423!1.69e-12!605;UBERON:0000923!4.08e-12!604;UBERON:0005291!4.08e-12!604;UBERON:0006598!4.08e-12!604;UBERON:0002532!4.08e-12!604;UBERON:0000467!1.65e-11!625;UBERON:0000480!2.07e-11!626;UBERON:0000062!3.84e-11!511;UBERON:0000481!7.26e-11!347;UBERON:0000468!1.88e-10!659;UBERON:0000483!3.19e-10!309;UBERON:0000119!3.31e-10!312;UBERON:0004111!2.00e-09!241;UBERON:0000477!3.82e-09!286;UBERON:0007196!4.47e-09!14;UBERON:0001558!4.47e-09!14;UBERON:0002308!2.40e-08!9;UBERON:0000125!2.40e-08!9;UBERON:0000200!2.54e-08!6;UBERON:0002420!2.68e-08!9;UBERON:0007245!2.68e-08!9;UBERON:0010009!2.68e-08!9;UBERON:0010011!2.68e-08!9;UBERON:0000454!2.68e-08!9;UBERON:0000165!3.96e-08!28;UBERON:0000930!3.96e-08!28;UBERON:0001004!7.72e-08!72;UBERON:0000166!1.08e-07!21;UBERON:0001871!1.33e-07!7;UBERON:0000161!2.27e-07!35;UBERON:0002021!2.58e-07!5;UBERON:0001872!2.99e-07!5;UBERON:0003126!5.01e-07!7;UBERON:0001005!5.01e-07!7;UBERON:0003076!9.11e-07!15;UBERON:0003057!9.11e-07!15 | |ontology_enrichment_uberon=UBERON:0004121!3.31e-44!169;UBERON:0000924!1.88e-43!173;UBERON:0006601!1.88e-43!173;UBERON:0000153!6.86e-38!129;UBERON:0007811!6.86e-38!129;UBERON:0000033!2.04e-37!123;UBERON:0001017!4.28e-37!82;UBERON:0001049!4.66e-37!57;UBERON:0005068!4.66e-37!57;UBERON:0006241!4.66e-37!57;UBERON:0007135!4.66e-37!57;UBERON:0000073!6.84e-36!94;UBERON:0001016!6.84e-36!94;UBERON:0005743!1.91e-35!86;UBERON:0002780!4.06e-33!41;UBERON:0001890!4.06e-33!41;UBERON:0006240!4.06e-33!41;UBERON:0003080!5.53e-32!42;UBERON:0002020!1.43e-30!34;UBERON:0003528!1.43e-30!34;UBERON:0001893!1.52e-30!34;UBERON:0002616!4.29e-30!59;UBERON:0000955!4.33e-30!69;UBERON:0006238!4.33e-30!69;UBERON:0002791!1.69e-29!33;UBERON:0001869!3.55e-29!32;UBERON:0003075!4.58e-29!86;UBERON:0007284!4.58e-29!86;UBERON:0002346!5.65e-28!90;UBERON:0003056!7.05e-26!61;UBERON:0007023!7.54e-26!115;UBERON:0002619!4.62e-24!22;UBERON:0000956!1.23e-23!25;UBERON:0000203!1.23e-23!25;UBERON:0001950!4.49e-22!20;UBERON:0000064!1.38e-18!219;UBERON:0000475!3.71e-18!365;UBERON:0000922!1.06e-12!612;UBERON:0002050!1.69e-12!605;UBERON:0005423!1.69e-12!605;UBERON:0000923!4.08e-12!604;UBERON:0005291!4.08e-12!604;UBERON:0006598!4.08e-12!604;UBERON:0002532!4.08e-12!604;UBERON:0000467!1.65e-11!625;UBERON:0000480!2.07e-11!626;UBERON:0000062!3.84e-11!511;UBERON:0000481!7.26e-11!347;UBERON:0000468!1.88e-10!659;UBERON:0000483!3.19e-10!309;UBERON:0000119!3.31e-10!312;UBERON:0004111!2.00e-09!241;UBERON:0000477!3.82e-09!286;UBERON:0007196!4.47e-09!14;UBERON:0001558!4.47e-09!14;UBERON:0002308!2.40e-08!9;UBERON:0000125!2.40e-08!9;UBERON:0000200!2.54e-08!6;UBERON:0002420!2.68e-08!9;UBERON:0007245!2.68e-08!9;UBERON:0010009!2.68e-08!9;UBERON:0010011!2.68e-08!9;UBERON:0000454!2.68e-08!9;UBERON:0000165!3.96e-08!28;UBERON:0000930!3.96e-08!28;UBERON:0001004!7.72e-08!72;UBERON:0000166!1.08e-07!21;UBERON:0001871!1.33e-07!7;UBERON:0000161!2.27e-07!35;UBERON:0002021!2.58e-07!5;UBERON:0001872!2.99e-07!5;UBERON:0003126!5.01e-07!7;UBERON:0001005!5.01e-07!7;UBERON:0003076!9.11e-07!15;UBERON:0003057!9.11e-07!15 | ||
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| ||
|short_description=p2@SHROOM2 | |short_description=p2@SHROOM2 | ||
}} | }} |
Latest revision as of 15:39, 16 September 2015
Short description: | p2@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000418909, uc004csv.2, uc011mic.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | F5H3B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.00e-13 | 42 |
respiratory epithelial cell | 4.85e-11 | 13 |
general ecto-epithelial cell | 2.19e-10 | 14 |
endodermal cell | 5.23e-09 | 58 |
transitional epithelial cell | 4.50e-08 | 4 |
urothelial cell | 4.50e-08 | 4 |
epithelial cell of alimentary canal | 9.57e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.59e-08 | 14 |