FFCP PHASE1:Hg19::chr20:45523452..45523459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2139 | |EntrezGene=2139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3520 | |HGNC=3520 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2F5 | |UniProt=F2Z2F5 | ||
|association_with_transcript=-49bp_to_ENST00000497062_5end | |association_with_transcript=-49bp_to_ENST00000497062_5end | ||
|cluster_id=chr20:45523452..45523459,+ | |||
|coexpression_cluster_id=C4045 | |coexpression_cluster_id=C4045 | ||
|description=CAGE_peak_5_at_EYA2_5end | |description=CAGE_peak_5_at_EYA2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.69e-08;3!UBERON:0003057;2.69e-08;3!UBERON:0010115;2.98e-07;1!UBERON:0008801;7.77e-07;1!UBERON:0005754;7.77e-07;1 | |ontology_enrichment_development_v019=UBERON:0006241;2.69e-08;3!UBERON:0003057;2.69e-08;3!UBERON:0010115;2.98e-07;1!UBERON:0008801;7.77e-07;1!UBERON:0005754;7.77e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;7.77e-07;1!DOID:3347;7.77e-07;1!DOID:3149;7.77e-07;1 | |ontology_enrichment_disease_v019=DOID:3151;7.77e-07;1!DOID:3347;7.77e-07;1!DOID:3149;7.77e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3347,5.69e-07,1;DOID:3151,6.38e-07,1;DOID:3149,6.38e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-25!115;UBERON:0000153!3.26e-15!129;UBERON:0007811!3.26e-15!129;UBERON:0003075!7.67e-14!86;UBERON:0007284!7.67e-14!86;UBERON:0000033!2.47e-13!123;UBERON:0000475!4.72e-13!365;UBERON:0005743!1.09e-12!86;UBERON:0002346!1.25e-12!90;UBERON:0001049!7.90e-12!57;UBERON:0005068!7.90e-12!57;UBERON:0006241!7.90e-12!57;UBERON:0007135!7.90e-12!57;UBERON:0000073!3.42e-11!94;UBERON:0001016!3.42e-11!94;UBERON:0001017!4.37e-11!82;UBERON:0002020!1.51e-10!34;UBERON:0003528!1.51e-10!34;UBERON:0001893!1.53e-10!34;UBERON:0003056!1.94e-10!61;UBERON:0004121!5.21e-10!169;UBERON:0002791!7.31e-10!33;UBERON:0000924!2.16e-09!173;UBERON:0006601!2.16e-09!173;UBERON:0000955!2.65e-09!69;UBERON:0006238!2.65e-09!69;UBERON:0001869!2.85e-09!32;UBERON:0002616!6.50e-09!59;UBERON:0002619!8.12e-09!22;UBERON:0002780!1.49e-08!41;UBERON:0001890!1.49e-08!41;UBERON:0006240!1.49e-08!41;UBERON:0001950!1.74e-08!20;UBERON:0003080!3.37e-08!42;UBERON:0000956!2.80e-07!25;UBERON:0000203!2.80e-07!25;UBERON:0000200!7.27e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!3.15e-25!115;UBERON:0000153!3.26e-15!129;UBERON:0007811!3.26e-15!129;UBERON:0003075!7.67e-14!86;UBERON:0007284!7.67e-14!86;UBERON:0000033!2.47e-13!123;UBERON:0000475!4.72e-13!365;UBERON:0005743!1.09e-12!86;UBERON:0002346!1.25e-12!90;UBERON:0001049!7.90e-12!57;UBERON:0005068!7.90e-12!57;UBERON:0006241!7.90e-12!57;UBERON:0007135!7.90e-12!57;UBERON:0000073!3.42e-11!94;UBERON:0001016!3.42e-11!94;UBERON:0001017!4.37e-11!82;UBERON:0002020!1.51e-10!34;UBERON:0003528!1.51e-10!34;UBERON:0001893!1.53e-10!34;UBERON:0003056!1.94e-10!61;UBERON:0004121!5.21e-10!169;UBERON:0002791!7.31e-10!33;UBERON:0000924!2.16e-09!173;UBERON:0006601!2.16e-09!173;UBERON:0000955!2.65e-09!69;UBERON:0006238!2.65e-09!69;UBERON:0001869!2.85e-09!32;UBERON:0002616!6.50e-09!59;UBERON:0002619!8.12e-09!22;UBERON:0002780!1.49e-08!41;UBERON:0001890!1.49e-08!41;UBERON:0006240!1.49e-08!41;UBERON:0001950!1.74e-08!20;UBERON:0003080!3.37e-08!42;UBERON:0000956!2.80e-07!25;UBERON:0000203!2.80e-07!25;UBERON:0000200!7.27e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002360;2.03e-12;2!UBERON:0000094;2.03e-12;2!UBERON:0010743;2.03e-12;2!UBERON:0002370;5.16e-12;2!UBERON:0005058;5.16e-12;2!UBERON:0009113;5.16e-12;2!UBERON:0004177;1.68e-10;5!UBERON:0005057;1.68e-10;5!UBERON:0002240;2.69e-08;3!UBERON:0005174;2.69e-08;3!UBERON:0001137;2.69e-08;3!UBERON:0005795;2.35e-07;1!UBERON:0002363;2.98e-07;1!UBERON:0001831;7.77e-07;1!UBERON:0000998;7.77e-07;1!UBERON:0006868;7.77e-07;1!UBERON:0001567;7.77e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002360;2.03e-12;2!UBERON:0000094;2.03e-12;2!UBERON:0010743;2.03e-12;2!UBERON:0002370;5.16e-12;2!UBERON:0005058;5.16e-12;2!UBERON:0009113;5.16e-12;2!UBERON:0004177;1.68e-10;5!UBERON:0005057;1.68e-10;5!UBERON:0002240;2.69e-08;3!UBERON:0005174;2.69e-08;3!UBERON:0001137;2.69e-08;3!UBERON:0005795;2.35e-07;1!UBERON:0002363;2.98e-07;1!UBERON:0001831;7.77e-07;1!UBERON:0000998;7.77e-07;1!UBERON:0006868;7.77e-07;1!UBERON:0001567;7.77e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,2.79e-12,2;UBERON:0000094,2.79e-12,2;UBERON:0010743,2.79e-12,2;UBERON:0003408,4.37e-09,10;UBERON:0000974,6.99e-09,10;UBERON:0002240,2.80e-08,3;UBERON:0005174,2.80e-08,3;UBERON:0001137,2.80e-08,3;UBERON:0007023,9.05e-08,114;UBERON:0004177,1.32e-07,7;UBERON:0005057,1.32e-07,7;UBERON:0002363,2.99e-07,1;UBERON:0007645,2.99e-07,1;UBERON:0007647,2.99e-07,1;UBERON:0010115,2.99e-07,1;UBERON:0000998,4.25e-07,1;UBERON:0006868,4.25e-07,1;UBERON:0001831,4.51e-07,1;UBERON:0001567,4.51e-07,1;UBERON:0008801,4.51e-07,1 | |||
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| ||
|short_description=p5@EYA2 | |short_description=p5@EYA2 | ||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p5@EYA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EYA2_5end |
Coexpression cluster: | C4045_neuroblastoma_cord_dura_salivary_seminal_medulloblastoma_small |
Association with transcript: | -49bp_to_ENST00000497062_5end |
EntrezGene: | EYA2 |
HGNC: | 3520 |
UniProt: | F2Z2F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meninx | 2.79e-12 | 2 |
membrane organ | 2.79e-12 | 2 |
meningeal cluster | 2.79e-12 | 2 |
gland of gut | 4.37e-09 | 10 |
neck | 6.99e-09 | 10 |
spinal cord | 2.80e-08 | 3 |
dorsal region element | 2.80e-08 | 3 |
dorsum | 2.80e-08 | 3 |
adult organism | 9.05e-08 | 114 |
hemopoietic organ | 1.32e-07 | 7 |
immune organ | 1.32e-07 | 7 |
dura mater | 2.99e-07 | 1 |
future meninx | 2.99e-07 | 1 |
ectomeninx | 2.99e-07 | 1 |
future dura mater | 2.99e-07 | 1 |
seminal vesicle | 4.25e-07 | 1 |
seminal fluid secreting gland | 4.25e-07 | 1 |
parotid gland | 4.51e-07 | 1 |
cheek | 4.51e-07 | 1 |
parotid gland primordium | 4.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.69e-07 | 1 |
skin squamous cell carcinoma | 6.38e-07 | 1 |
keratoacanthoma | 6.38e-07 | 1 |