FFCP PHASE1:Hg19::chrX:9707625..9707629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4935 | |EntrezGene=4935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20145 | |HGNC=20145 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_ENST00000487206_5end | |association_with_transcript=129bp_to_ENST00000487206_5end | ||
|cluster_id=chrX:9707625..9707629,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_6_at_GPR143_5end | |description=CAGE_peak_6_at_GPR143_5end | ||
|id=chrX:9707625..9707629,- | |id=chrX:9707625..9707629,- | ||
|ontology_enrichment_celltype=CL:0000147!1.36e-42!14;CL:0000148!2.12e-36!10;CL:0000541!2.12e-36!10;CL:0002322!4.05e-19!5;CL:0000710!4.42e-17!20;CL:0000149!5.68e-15!4;CL:0000325!3.14e-13!39;CL:0002567!4.24e-12!3;CL:0000075!4.40e-12!27;CL:0002077!1.58e-11!33;CL:0002586!2.12e-11!3;CL:0000066!1.58e-08!254;CL:0000333!8.22e-07!41 | |ontology_enrichment_celltype=CL:0000147!1.36e-42!14;CL:0000148!2.12e-36!10;CL:0000541!2.12e-36!10;CL:0002322!4.05e-19!5;CL:0000710!4.42e-17!20;CL:0000149!5.68e-15!4;CL:0000325!3.14e-13!39;CL:0002567!4.24e-12!3;CL:0000075!4.40e-12!27;CL:0002077!1.58e-11!33;CL:0002586!2.12e-11!3;CL:0000066!1.58e-08!254;CL:0000333!8.22e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.26e-139;10!CL:0000147;1.91e-99;14!CL:0002322;6.91e-70;5!CL:0000710;1.10e-69;20!CL:0000075;1.16e-51;27!CL:0002077;2.30e-35;34!CL:0002567;3.59e-30;3!CL:0002321;9.79e-24;15!CL:0000149;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.89e-139,10;CL:0000541,3.89e-139,10;CL:0000147,1.79e-99,14;CL:0002322,6.33e-70,5;CL:0000710,1.05e-69,20;CL:0000075,1.12e-51,27;CL:0002077,4.64e-41,34;CL:0000333,1.78e-32,41;CL:0002567,4.84e-30,3;CL:0000133,6.88e-23,59;CL:0000221,7.46e-19,72;CL:0000149,6.50e-07,4;CL:0002321,8.32e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;4.38e-11;59!CL:0000221;3.17e-10;72 | |||
|ontology_enrichment_disease=DOID:1909!1.04e-07!2;DOID:120!5.42e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!2.12e-11!3;UBERON:0001782!2.12e-11!3;UBERON:0005424!2.12e-11!3;UBERON:0000966!2.14e-11!5;UBERON:0005388!2.14e-11!5;UBERON:0001802!2.14e-11!5 | |ontology_enrichment_uberon=UBERON:0001781!2.12e-11!3;UBERON:0001782!2.12e-11!3;UBERON:0005424!2.12e-11!3;UBERON:0000966!2.14e-11!5;UBERON:0005388!2.14e-11!5;UBERON:0001802!2.14e-11!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@GPR143 | |short_description=p6@GPR143 | ||
}} | }} |
Latest revision as of 15:19, 16 September 2015
Short description: | p6@GPR143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPR143_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 129bp_to_ENST00000487206_5end |
EntrezGene: | GPR143 |
HGNC: | 20145 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.89e-139 | 10 |
melanoblast | 3.89e-139 | 10 |
pigment cell | 1.79e-99 | 14 |
embryonic stem cell | 6.33e-70 | 5 |
neurecto-epithelial cell | 1.05e-69 | 20 |
columnar/cuboidal epithelial cell | 1.12e-51 | 27 |
ecto-epithelial cell | 4.64e-41 | 34 |
migratory neural crest cell | 1.78e-32 | 41 |
light melanocyte | 4.84e-30 | 3 |
neurectodermal cell | 6.88e-23 | 59 |
ectodermal cell | 7.46e-19 | 72 |
visual pigment cell | 6.50e-07 | 4 |
embryonic cell | 8.32e-07 | 250 |