FFCP PHASE1:Hg19::chr7:138310746..138310787,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:138310746..138310787,-
|short_description=p1@SVOPL
|description=CAGE_peak_1_at_SVOPL_5end
|association_with_transcript=51bp_to_ENST00000478865_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=136306 | |EntrezGene=136306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27034 | |HGNC=27034 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000478865_5end | |||
|cluster_id=chr7:138310746..138310787,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_1_at_SVOPL_5end | |||
|id=chr7:138310746..138310787,- | |||
|ontology_enrichment_celltype=CL:0000625!1.40e-15!11;CL:0000037!3.31e-14!172;CL:0000566!3.31e-14!172;CL:0002274!9.50e-14!5;CL:0000457!9.50e-14!5;CL:0002191!9.50e-14!5;CL:0000097!9.50e-14!5;CL:0000831!9.50e-14!5;CL:0002028!9.50e-14!5;CL:0000988!8.26e-13!182;CL:0000084!1.01e-12!25;CL:0000827!1.01e-12!25;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0000791!8.43e-11!18;CL:0000789!8.43e-11!18;CL:0002420!8.43e-11!18;CL:0002419!8.43e-11!18;CL:0000790!8.43e-11!18;CL:0000163!2.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.45e-31;5!CL:0000163;2.48e-17;9!CL:0000764;2.77e-12;2!CL:0000558;2.77e-12;2!CL:0000763;2.06e-08;100!CL:0000037;3.51e-07;1!CL:0001024;3.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.37e-31,5;CL:0002028,2.37e-31,5;CL:0000763,7.60e-18,108;CL:0000049,7.60e-18,108;CL:0000163,2.44e-17,9;CL:0000037,5.05e-17,168;CL:0002032,2.48e-16,161;CL:0000837,2.48e-16,161;CL:0000988,6.65e-16,177;CL:0000764,2.47e-12,2;CL:0000765,2.47e-12,2;CL:0000050,2.47e-12,2;CL:0000038,2.47e-12,2;CL:0000558,2.47e-12,2;CL:0000547,2.47e-12,2;CL:0000549,2.47e-12,2;CL:0000550,2.47e-12,2;CL:0000552,2.47e-12,2;CL:0001024,3.41e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.52e-17!31;DOID:1240!1.55e-16!39;DOID:2531!2.22e-14!51;DOID:0060083!2.22e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.34e-29;31!DOID:1240;2.50e-23;39!DOID:2531;2.37e-16;51!DOID:0060083;2.37e-16;51!DOID:1036;3.92e-12;8!DOID:9119;1.27e-07;1!DOID:8552;2.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.16e-31,39;DOID:8692,5.27e-30,31;DOID:2531,2.87e-23,51;DOID:0060083,2.87e-23,51;DOID:1036,4.16e-12,8;DOID:9119,1.27e-07,1;DOID:8552,2.09e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SVOPL | |||
}} | }} |
Latest revision as of 15:11, 16 September 2015
Short description: | p1@SVOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SVOPL_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 51bp_to_ENST00000478865_5end |
EntrezGene: | SVOPL |
HGNC: | 27034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.37e-31 | 5 |
basophil mast progenitor cell | 2.37e-31 | 5 |
myeloid cell | 7.60e-18 | 108 |
common myeloid progenitor | 7.60e-18 | 108 |
endocrine cell | 2.44e-17 | 9 |
hematopoietic stem cell | 5.05e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.48e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-16 | 161 |
hematopoietic cell | 6.65e-16 | 177 |
erythroid lineage cell | 2.47e-12 | 2 |
erythroblast | 2.47e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 2.47e-12 | 2 |
erythroid progenitor cell | 2.47e-12 | 2 |
reticulocyte | 2.47e-12 | 2 |
proerythroblast | 2.47e-12 | 2 |
basophilic erythroblast | 2.47e-12 | 2 |
polychromatophilic erythroblast | 2.47e-12 | 2 |
orthochromatic erythroblast | 2.47e-12 | 2 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.41e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.16e-31 | 39 |
myeloid leukemia | 5.27e-30 | 31 |
hematologic cancer | 2.87e-23 | 51 |
immune system cancer | 2.87e-23 | 51 |
chronic leukemia | 4.16e-12 | 8 |
acute myeloid leukemia | 1.27e-07 | 1 |
chronic myeloid leukemia | 2.09e-07 | 1 |