FFCP PHASE1:Hg19::chr3:169381183..169381205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=C9JU02 | |UniProt=C9JU02 | ||
|association_with_transcript=-5bp_to_ENST00000486748_5end | |association_with_transcript=-5bp_to_ENST00000486748_5end | ||
|cluster_id=chr3:169381183..169381205,- | |||
|description=CAGE_peak_4_at_MECOM_5end | |description=CAGE_peak_4_at_MECOM_5end | ||
|id=chr3:169381183..169381205,- | |id=chr3:169381183..169381205,- | ||
|ontology_enrichment_celltype=CL:0002139!7.84e-13!24;CL:0000066!4.56e-12!254;CL:0000071!6.67e-10!18;CL:0002546!6.67e-10!18;CL:0000076!1.20e-09!62;CL:0000213!1.05e-08!57;CL:0000215!1.05e-08!57;CL:0000115!1.27e-08!35;CL:0002078!3.46e-07!44 | |ontology_enrichment_celltype=CL:0002139!7.84e-13!24;CL:0000066!4.56e-12!254;CL:0000071!6.67e-10!18;CL:0002546!6.67e-10!18;CL:0000076!1.20e-09!62;CL:0000213!1.05e-08!57;CL:0000215!1.05e-08!57;CL:0000115!1.27e-08!35;CL:0002078!3.46e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.86e-17;24!CL:0000071;5.56e-17;18!CL:1000413;8.17e-11;9!CL:0002543;2.39e-09;6!CL:0000115;5.14e-09;36!CL:1000306;1.44e-07;4!CL:0002547;1.44e-07;4!CL:0002149;1.46e-07;6!CL:0002255;1.46e-07;6!CL:0000076;3.03e-07;63!CL:0002544;4.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.70e-17,24;CL:0000071,5.70e-17,18;CL:0002546,5.70e-17,18;CL:0000076,4.57e-12,63;CL:1000413,1.23e-10,9;CL:0000115,5.20e-10,36;CL:0002543,1.22e-09,6;CL:0002078,4.13e-08,45;CL:0000213,1.30e-07,58;CL:0000215,1.30e-07,58;CL:1000306,1.42e-07,4;CL:0002547,1.42e-07,4;CL:0002149,2.37e-07,6;CL:0002255,2.37e-07,6;CL:0002544,3.92e-07,6;CL:0000066,5.01e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;5.56e-17;18 | |||
|ontology_enrichment_disease=DOID:305!4.80e-10!106;DOID:0050687!2.87e-07!143 | |ontology_enrichment_disease=DOID:305!4.80e-10!106;DOID:0050687!2.87e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.08e-09;14!DOID:3001;1.46e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.16e-09,14;DOID:3001,2.37e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.91e-17!286;UBERON:0004872!8.10e-14!84;UBERON:0002049!8.12e-14!79;UBERON:0007798!8.12e-14!79;UBERON:0004111!8.28e-14!241;UBERON:0000055!1.15e-13!69;UBERON:0001981!1.90e-12!60;UBERON:0007500!1.90e-12!60;UBERON:0004537!1.90e-12!60;UBERON:0006965!1.90e-12!60;UBERON:0003914!6.55e-12!118;UBERON:0001009!7.09e-12!113;UBERON:0004535!1.37e-11!110;UBERON:0000025!2.69e-10!194;UBERON:0001986!6.67e-10!18;UBERON:0004638!6.67e-10!18;UBERON:0004852!6.67e-10!18;UBERON:0000468!1.98e-09!659;UBERON:0006914!5.22e-09!25;UBERON:0000487!7.93e-09!22;UBERON:0003103!8.38e-09!69;UBERON:0000483!3.13e-08!309;UBERON:0000119!7.72e-08!312;UBERON:0001637!8.73e-08!42;UBERON:0003509!8.73e-08!42;UBERON:0004572!8.73e-08!42;UBERON:0000922!1.28e-07!612;UBERON:0000467!1.30e-07!625;UBERON:0000480!1.67e-07!626;UBERON:0000065!4.30e-07!53;UBERON:0000481!5.32e-07!347;UBERON:0002050!5.92e-07!605;UBERON:0005423!5.92e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.56e-17;18!UBERON:0001986;5.56e-17;18!UBERON:0004852;5.56e-17;18!UBERON:0000487;3.84e-13;22!UBERON:0006914;1.05e-12;25!UBERON:0003915;8.17e-11;9!UBERON:0004700;8.17e-11;9!UBERON:0001917;8.17e-11;9!UBERON:0004175;7.79e-10;21!UBERON:0000947;3.07e-09;21!UBERON:0010191;3.07e-09;21!UBERON:0003975;6.40e-08;18!UBERON:0000490;7.47e-08;33!UBERON:0004797;1.44e-07;4!UBERON:0000415;1.44e-07;4!UBERON:0007240;1.44e-07;4!UBERON:0005742;1.44e-07;4!UBERON:0005734;1.44e-07;4!UBERON:0004664;1.44e-07;4!UBERON:0004663;1.44e-07;4!UBERON:0000995;8.98e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.70e-17,18;UBERON:0001986,5.70e-17,18;UBERON:0004852,5.70e-17,18;UBERON:0000487,3.91e-13,22;UBERON:0006914,8.36e-13,25;UBERON:0004872,1.96e-12,83;UBERON:0002049,3.70e-12,78;UBERON:0007798,3.70e-12,78;UBERON:0000055,1.32e-11,68;UBERON:0004535,2.00e-11,109;UBERON:0007500,4.56e-11,59;UBERON:0001981,4.56e-11,59;UBERON:0004537,4.56e-11,59;UBERON:0006965,4.56e-11,59;UBERON:0001009,7.55e-11,112;UBERON:0003915,1.23e-10,9;UBERON:0004700,1.23e-10,9;UBERON:0001917,1.23e-10,9;UBERON:0000947,2.07e-09,21;UBERON:0010191,2.07e-09,21;UBERON:0004797,2.41e-09,7;UBERON:0003914,7.78e-09,117;UBERON:0004175,9.15e-08,25;UBERON:0004111,1.31e-07,240;UBERON:0000415,1.42e-07,4;UBERON:0007240,1.42e-07,4;UBERON:0005742,1.42e-07,4;UBERON:0005734,1.42e-07,4;UBERON:0004664,1.42e-07,4;UBERON:0004663,1.42e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0,0,1.23766352960047,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.53435074212236,0,0,0.144846518960824,0,0.486634870302636,3.21418378357831,2.21729397462564,2.3715392137144,2.68507104770311,0,0,0,0,0,0,0,0,1.78886166630035,0,1.04142150482278,2.82653970962005,2.09749718104953,1.37559020970034,1.04497483268405,1.55050055501597,0.71153252537342,2.34304428935269,0.805658634218294,0,1.22031028774085,2.94130464276695,4.86085168729056,3.66128885964727,2.46982309888787,1.91439516821648,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0,0,2.15271869829786,2.51577443545116,13.7681577959431,1.41867352879343,0.560677600142307,0,0.24666754841716,3.7345324247972,2.2900814251847,1.47115712802113,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.842923450390509,0.482022059766964,0.441175890929576,1.30727666455444,0.474541238222193,0.134831308160164,0.784885860501384,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.614942192715568,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0.433099343283221,1.38895653772983,0.761016608938393,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.8403723757871,1.00034104211935,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,1.60405176242628,1.10497186723076,0,0,0.131124414959424,0,0.770153371044148,0,0,1.05551628892876,0,0.340187410553031,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,1.81813406897076,2.11409074101617,4.59405764980503,0.50578890427775,0.464845549297286,1.88887408098384,0,1.54016790088044,0,0,0.18532421910392,2.00374841438788,0,0,0,0,1.28381696410176,0.318203247925937,0.78494864019923,0,0,0,0.808729926293264,0,0.842516912477962,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,1.15755106853338,1.9676842561399,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,1.22386941009813,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,1.46508179271894,0,0.222886768554957,0,0.23874448473769,0,0,0,0,1.22439575525196,0,0,11.556383318562,0.276283915531148,0,0,0,0,0.629078458031288,1.07412704805365,0,2.56472854656027,0,0,0,0.185536196323703,0,0.520855522170466,0.0874599999961957,0,1.365521379426,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,1.85195387982283,0.83654246567162,2.15460723810632,0.569710279235006,0,0,0,0.957003479195758,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.442287822516696,0,0,0,0.104421949505455,0.134802265961354,1.60515529459758,0,0,0.391329237864179,0,6.31335044559025,2.41981432097328,0,1.95878396848313,0.60129367765797,1.14057010536972,0,0,0,0,1.13843818411917,0,4.33899345837827,1.07791637155815,1.82824333818845,0.698906672968121,0.171986032471617,0.387025325156341,0.511625219603299,0.985385484638511,1.84279131327997,0,0.677942222341597,0.411125773940253,0.596143835108969,0,0.782205530939212,0.240476460754601,1.70762395791482,0,2.59362750877391,0,0.171594997861965,0.14405479798815,0.124252535565433,0.471388069233591,0.951329442515298,0.104602846312333,0.407992870545287,0.288950589901519,0,0.273810757783986,0,0.859530882839914,0,6.42349522926185,9.8538982325024,0.717873024576814,0,0.429226048136571,0.89268582976749,1.47803639470798,0,1.16495949527454,0,0,0,1.67326718575073,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,1.34173875039706,9.37787916860458,7.50100610330473,0.105600336519406,0,1.34340638123612,0,0,0,0,0,0,1.19730191562487,0,0.681552087141687,0,0,0,0.258565912723101,0,0,2.11444506695002,4.0579216775724,12.2619357977739,7.87054205159671,0,0,0,1.91502377331055,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.221858103073705,0.372578417648301,0,1.37478448758317,0,0,1.41159491818903,0.468334905806882,0.434763085832475,0,0,0,0.189403005275089,1.0062716070103,0,0,0.151230923763239,1.24349760466224,0.887130899937803,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0.1074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| ||
|short_description=p4@MECOM | |short_description=p4@MECOM | ||
}} | }} |
Latest revision as of 14:46, 16 September 2015
Short description: | p4@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MECOM_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000486748_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | C9JU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.70e-17 | 24 |
blood vessel endothelial cell | 5.70e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.70e-17 | 18 |
squamous epithelial cell | 4.57e-12 | 63 |
endothelial cell of artery | 1.23e-10 | 9 |
endothelial cell | 5.20e-10 | 36 |
vein endothelial cell | 1.22e-09 | 6 |
meso-epithelial cell | 4.13e-08 | 45 |
lining cell | 1.30e-07 | 58 |
barrier cell | 1.30e-07 | 58 |
fibroblast of tunica adventitia of artery | 1.42e-07 | 4 |
fibroblast of the aortic adventitia | 1.42e-07 | 4 |
epithelial cell of uterus | 2.37e-07 | 6 |
stromal cell of endometrium | 2.37e-07 | 6 |
aortic endothelial cell | 3.92e-07 | 6 |
epithelial cell | 5.01e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.70e-17 | 18 |
endothelium | 5.70e-17 | 18 |
cardiovascular system endothelium | 5.70e-17 | 18 |
simple squamous epithelium | 3.91e-13 | 22 |
squamous epithelium | 8.36e-13 | 25 |
splanchnic layer of lateral plate mesoderm | 1.96e-12 | 83 |
vasculature | 3.70e-12 | 78 |
vascular system | 3.70e-12 | 78 |
vessel | 1.32e-11 | 68 |
cardiovascular system | 2.00e-11 | 109 |
epithelial tube open at both ends | 4.56e-11 | 59 |
blood vessel | 4.56e-11 | 59 |
blood vasculature | 4.56e-11 | 59 |
vascular cord | 4.56e-11 | 59 |
circulatory system | 7.55e-11 | 112 |
endothelial tube | 1.23e-10 | 9 |
arterial system endothelium | 1.23e-10 | 9 |
endothelium of artery | 1.23e-10 | 9 |
aorta | 2.07e-09 | 21 |
aortic system | 2.07e-09 | 21 |
blood vessel layer | 2.41e-09 | 7 |
epithelial tube | 7.78e-09 | 117 |
internal genitalia | 9.15e-08 | 25 |
anatomical conduit | 1.31e-07 | 240 |
artery wall | 1.42e-07 | 4 |
tunica adventitia of artery | 1.42e-07 | 4 |
adventitia | 1.42e-07 | 4 |
tunica adventitia of blood vessel | 1.42e-07 | 4 |
aorta tunica adventitia | 1.42e-07 | 4 |
aorta wall | 1.42e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.16e-09 | 14 |
female reproductive endometrioid cancer | 2.37e-07 | 6 |