FFCP PHASE1:Hg19::chr16:34980911..34980930,+: Difference between revisions
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|id=chr16:34980911..34980930,+
|short_description=p2@FLJ26245
|description=CAGE_peak_2_at_FLJ26245_5end
|association_with_transcript=0bp_to_NR_033985,uc002edz.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=400533 | |EntrezGene=400533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_033985,uc002edz.1_5end | |||
|cluster_id=chr16:34980911..34980930,+ | |||
|coexpression_cluster_id=C464 | |||
|description=CAGE_peak_2_at_FLJ26245_5end | |||
|id=chr16:34980911..34980930,+ | |||
|ontology_enrichment_celltype=CL:0000319!8.72e-18!1;CL:0002149!3.44e-12!6;CL:0002255!3.44e-12!6;CL:0000054!1.33e-09!2;CL:0000137!1.33e-09!2;CL:0000092!1.33e-09!2;CL:0000159!1.44e-09!2;CL:0002097!1.71e-09!2;CL:1000415!2.02e-09!2;CL:0000174!9.64e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.48e-20;6!CL:0002255;6.48e-20;6!CL:0000054;2.74e-15;2!CL:0000137;2.74e-15;2!CL:0000092;2.74e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.48e-20,6;CL:0002255,6.48e-20,6;CL:0000054,2.74e-15,2;CL:0000137,2.74e-15,2;CL:0000092,2.74e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.24e-12;10!UBERON:0007123;6.04e-07;5 | |||
|ontology_enrichment_disease=DOID:4468!2.18e-34!2;DOID:0060085!7.37e-18!1;DOID:3165!7.37e-18!1;DOID:0060121!7.37e-18!1;DOID:2438!7.37e-18!1;DOID:4418!7.37e-18!1;DOID:3030!8.72e-18!1;DOID:299!8.93e-17!25;DOID:3001!3.44e-12!6;DOID:120!2.80e-10!27;DOID:200!1.33e-09!2;DOID:4305!1.33e-09!2;DOID:193!1.37e-09!29;DOID:305!1.96e-09!106;DOID:0050687!1.10e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.58e-57;2!DOID:0060085;4.20e-29;1!DOID:3165;4.20e-29;1!DOID:0060121;4.20e-29;1!DOID:2438;4.20e-29;1!DOID:4418;4.20e-29;1!DOID:3001;6.48e-20;6!DOID:299;1.19e-18;25!DOID:120;2.59e-17;27!DOID:193;3.69e-16;29!DOID:200;2.74e-15;2!DOID:4305;2.74e-15;2!DOID:0060072;2.61e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.58e-57,2;DOID:0060085,4.20e-29,1;DOID:3165,4.20e-29,1;DOID:0060121,4.20e-29,1;DOID:2438,4.20e-29,1;DOID:4418,4.20e-29,1;DOID:3001,6.48e-20,6;DOID:299,1.19e-18,25;DOID:120,2.59e-17,27;DOID:193,3.69e-16,29;DOID:200,2.74e-15,2;DOID:4305,2.74e-15,2;DOID:0060072,2.61e-08,4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;2.61e-08;4!UBERON:0000995;1.13e-07;17!UBERON:0003975;2.68e-07;18!UBERON:0002046;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.61e-08,4;UBERON:0002046,6.04e-07,5;UBERON:0004117,6.04e-07,5;UBERON:0007689,6.04e-07,5;UBERON:0007123,6.04e-07,5;UBERON:0003091,6.04e-07,5 | |||
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|short_description=p2@FLJ26245 | |||
}} | }} |
Latest revision as of 14:44, 16 September 2015
Short description: | p2@FLJ26245 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLJ26245_5end |
Coexpression cluster: | C464_clear_serous_pagetoid_squamous_chorionic_thyroid_renal |
Association with transcript: | 0bp_to_NR_033985, uc002edz.1_5end |
EntrezGene: | FLJ26245 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.48e-20 | 6 |
stromal cell of endometrium | 6.48e-20 | 6 |
bone matrix secreting cell | 2.74e-15 | 2 |
osteocyte | 2.74e-15 | 2 |
osteoclast | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.61e-08 | 4 |
thyroid gland | 6.04e-07 | 5 |
pharyngeal pouch | 6.04e-07 | 5 |
thyroid diverticulum | 6.04e-07 | 5 |
pharyngeal pouch 2 | 6.04e-07 | 5 |
thyroid primordium | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.58e-57 | 2 |
organ system benign neoplasm | 4.20e-29 | 1 |
skin benign neoplasm | 4.20e-29 | 1 |
integumentary system benign neoplasm | 4.20e-29 | 1 |
dermis tumor | 4.20e-29 | 1 |
cutaneous fibrous histiocytoma | 4.20e-29 | 1 |
female reproductive endometrioid cancer | 6.48e-20 | 6 |
adenocarcinoma | 1.19e-18 | 25 |
female reproductive organ cancer | 2.59e-17 | 27 |
reproductive organ cancer | 3.69e-16 | 29 |
giant cell tumor | 2.74e-15 | 2 |
bone giant cell tumor | 2.74e-15 | 2 |
benign neoplasm | 2.61e-08 | 4 |