FFCP PHASE1:Hg19::chr2:26257054..26257071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10890 | |EntrezGene=10890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9759 | |HGNC=9759 | ||
|TSSclassifier=strong | |||
|UniProt=P61026 | |UniProt=P61026 | ||
|association_with_transcript=75bp_to_ENST00000264710_5end | |association_with_transcript=75bp_to_ENST00000264710_5end | ||
|cluster_id=chr2:26257054..26257071,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_2_at_RAB10_5end | |description=CAGE_peak_2_at_RAB10_5end | ||
|id=chr2:26257054..26257071,+ | |id=chr2:26257054..26257071,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.56e-26!112;CL:0000049!4.56e-26!112;CL:0002009!1.25e-25!65;CL:0000012!7.08e-25!682;CL:0000557!7.37e-25!71;CL:0002194!1.21e-24!63;CL:0000576!1.21e-24!63;CL:0000040!1.21e-24!63;CL:0000559!1.21e-24!63;CL:0000766!4.44e-24!76;CL:0000860!8.02e-24!45;CL:0000548!9.74e-24!679;CL:0000004!9.74e-24!679;CL:0000255!9.74e-24!679;CL:0002057!5.24e-23!42;CL:0000839!1.22e-21!70;CL:0000063!4.99e-21!578;CL:0002032!1.71e-17!165;CL:0000837!1.71e-17!165;CL:0000037!3.92e-17!172;CL:0000566!3.92e-17!172;CL:0000988!8.90e-17!182;CL:0000003!1.53e-16!722;CL:0000738!1.55e-15!140;CL:0000066!8.62e-15!254;CL:0002087!7.08e-13!119;CL:0000144!1.12e-12!625;CL:0002031!1.40e-12!124;CL:0002371!5.13e-08!591;CL:0002076!1.12e-07!43 | |ontology_enrichment_celltype=CL:0000763!4.56e-26!112;CL:0000049!4.56e-26!112;CL:0002009!1.25e-25!65;CL:0000012!7.08e-25!682;CL:0000557!7.37e-25!71;CL:0002194!1.21e-24!63;CL:0000576!1.21e-24!63;CL:0000040!1.21e-24!63;CL:0000559!1.21e-24!63;CL:0000766!4.44e-24!76;CL:0000860!8.02e-24!45;CL:0000548!9.74e-24!679;CL:0000004!9.74e-24!679;CL:0000255!9.74e-24!679;CL:0002057!5.24e-23!42;CL:0000839!1.22e-21!70;CL:0000063!4.99e-21!578;CL:0002032!1.71e-17!165;CL:0000837!1.71e-17!165;CL:0000037!3.92e-17!172;CL:0000566!3.92e-17!172;CL:0000988!8.90e-17!182;CL:0000003!1.53e-16!722;CL:0000738!1.55e-15!140;CL:0000066!8.62e-15!254;CL:0002087!7.08e-13!119;CL:0000144!1.12e-12!625;CL:0002031!1.40e-12!124;CL:0002371!5.13e-08!591;CL:0002076!1.12e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.61e-18;33!CL:0002057;8.61e-18;33!CL:0000473;2.04e-17;39!CL:0000234;2.04e-17;39!CL:0000576;1.23e-13;48!CL:0000766;6.76e-11;69!CL:0000763;1.00e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.17e-26,48;CL:0000234,3.17e-26,48;CL:0000763,1.72e-25,108;CL:0000049,1.72e-25,108;CL:0002009,2.66e-25,61;CL:0000557,1.86e-24,67;CL:0002194,2.60e-24,59;CL:0000576,2.60e-24,59;CL:0000040,2.60e-24,59;CL:0000559,2.60e-24,59;CL:0000766,1.25e-23,72;CL:0000860,4.58e-23,42;CL:0002057,4.58e-23,42;CL:0000839,3.46e-21,66;CL:0002032,7.13e-17,161;CL:0000837,7.13e-17,161;CL:0000037,1.63e-16,168;CL:0000988,3.12e-16,177;CL:0000738,6.16e-15,136;CL:0000066,1.07e-14,253;CL:0002087,2.67e-12,115;CL:0002031,5.22e-12,120;CL:0002076,1.43e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-17;42!CL:0000049;2.33e-08;108 | |||
|ontology_enrichment_disease=DOID:162!2.43e-14!235;DOID:14566!2.67e-14!239;DOID:305!5.43e-11!106;DOID:0050687!1.19e-09!143;DOID:0050686!2.63e-07!137 | |ontology_enrichment_disease=DOID:162!2.43e-14!235;DOID:14566!2.67e-14!239;DOID:305!5.43e-11!106;DOID:0050687!1.19e-09!143;DOID:0050686!2.63e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.69e-14,235;DOID:14566,2.95e-14,239;DOID:305,5.12e-11,106;DOID:0050687,1.21e-09,143;DOID:0050686,2.53e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.40e-24!80;UBERON:0002193!1.29e-22!112;UBERON:0001474!1.35e-22!86;UBERON:0002390!3.79e-22!102;UBERON:0003061!3.79e-22!102;UBERON:0002405!6.37e-19!115;UBERON:0004765!1.76e-18!101;UBERON:0001434!1.76e-18!101;UBERON:0002204!1.88e-10!167;UBERON:0003081!5.78e-08!216;UBERON:0000926!1.29e-07!448;UBERON:0004120!1.29e-07!448;UBERON:0006603!1.29e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.40e-24!80;UBERON:0002193!1.29e-22!112;UBERON:0001474!1.35e-22!86;UBERON:0002390!3.79e-22!102;UBERON:0003061!3.79e-22!102;UBERON:0002405!6.37e-19!115;UBERON:0004765!1.76e-18!101;UBERON:0001434!1.76e-18!101;UBERON:0002204!1.88e-10!167;UBERON:0003081!5.78e-08!216;UBERON:0000926!1.29e-07!448;UBERON:0004120!1.29e-07!448;UBERON:0006603!1.29e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.01e-24,93;UBERON:0002371,4.09e-24,76;UBERON:0001474,4.47e-22,82;UBERON:0002193,5.02e-22,108;UBERON:0002390,1.41e-21,98;UBERON:0003061,1.41e-21,98;UBERON:0004765,3.13e-20,90;UBERON:0001434,3.82e-16,100;UBERON:0002204,7.23e-09,167;UBERON:0003081,1.29e-08,203 | |||
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| ||
|short_description=p2@RAB10 | |short_description=p2@RAB10 | ||
}} | }} |
Latest revision as of 14:34, 16 September 2015
Short description: | p2@RAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB10_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 75bp_to_ENST00000264710_5end |
EntrezGene: | RAB10 |
HGNC: | 9759 |
UniProt: | P61026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.17e-26 | 48 |
phagocyte | 3.17e-26 | 48 |
myeloid cell | 1.72e-25 | 108 |
common myeloid progenitor | 1.72e-25 | 108 |
macrophage dendritic cell progenitor | 2.66e-25 | 61 |
granulocyte monocyte progenitor cell | 1.86e-24 | 67 |
monopoietic cell | 2.60e-24 | 59 |
monocyte | 2.60e-24 | 59 |
monoblast | 2.60e-24 | 59 |
promonocyte | 2.60e-24 | 59 |
myeloid leukocyte | 1.25e-23 | 72 |
classical monocyte | 4.58e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-23 | 42 |
myeloid lineage restricted progenitor cell | 3.46e-21 | 66 |
hematopoietic oligopotent progenitor cell | 7.13e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.13e-17 | 161 |
hematopoietic stem cell | 1.63e-16 | 168 |
hematopoietic cell | 3.12e-16 | 177 |
leukocyte | 6.16e-15 | 136 |
epithelial cell | 1.07e-14 | 253 |
nongranular leukocyte | 2.67e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.22e-12 | 120 |
endo-epithelial cell | 1.43e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.01e-24 | 93 |
bone marrow | 4.09e-24 | 76 |
bone element | 4.47e-22 | 82 |
hemolymphoid system | 5.02e-22 | 108 |
hematopoietic system | 1.41e-21 | 98 |
blood island | 1.41e-21 | 98 |
skeletal element | 3.13e-20 | 90 |
skeletal system | 3.82e-16 | 100 |
musculoskeletal system | 7.23e-09 | 167 |
lateral plate mesoderm | 1.29e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.69e-14 | 235 |
disease of cellular proliferation | 2.95e-14 | 239 |
carcinoma | 5.12e-11 | 106 |
cell type cancer | 1.21e-09 | 143 |
organ system cancer | 2.53e-07 | 137 |