FFCP PHASE1:Hg19::chr9:139873342..139873374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |EntrezGene=5730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |HGNC=9592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000460340_5end | |association_with_transcript=47bp_to_ENST00000460340_5end | ||
|cluster_id=chr9:139873342..139873374,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_6_at_PTGDS_5end | |description=CAGE_peak_6_at_PTGDS_5end | ||
|id=chr9:139873342..139873374,+ | |id=chr9:139873342..139873374,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.57e-08!7;CL:0000586!2.57e-08!7;CL:0002322!7.32e-07!5 | |ontology_enrichment_celltype=CL:0000039!2.57e-08!7;CL:0000586!2.57e-08!7;CL:0002322!7.32e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.49e-14;5!CL:0000784;1.38e-13;3!CL:0000039;1.52e-10;7!CL:0000586;1.52e-10;7!CL:0002575;5.74e-10;2!CL:0002541;2.36e-07;3!CL:0002321;7.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.02e-13,5;CL:0000784,2.60e-13,3;CL:0000039,1.16e-10,7;CL:0000586,1.16e-10,7;CL:0002575,6.02e-10,2;CL:0002541,2.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.47e-07;10!UBERON:0005564;3.47e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;8.92e-07;22!DOID:2994;8.92e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.34e-07,22;DOID:2994,7.34e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-16!115;UBERON:0005743!6.24e-15!86;UBERON:0000073!4.78e-14!94;UBERON:0001016!4.78e-14!94;UBERON:0001017!2.68e-13!82;UBERON:0001049!2.27e-12!57;UBERON:0005068!2.27e-12!57;UBERON:0006241!2.27e-12!57;UBERON:0007135!2.27e-12!57;UBERON:0002616!2.06e-11!59;UBERON:0000955!7.96e-11!69;UBERON:0006238!7.96e-11!69;UBERON:0002020!7.64e-10!34;UBERON:0003528!7.64e-10!34;UBERON:0003075!2.31e-09!86;UBERON:0007284!2.31e-09!86;UBERON:0002346!2.64e-09!90;UBERON:0002780!4.58e-09!41;UBERON:0001890!4.58e-09!41;UBERON:0006240!4.58e-09!41;UBERON:0003080!1.06e-08!42;UBERON:0001893!1.27e-08!34;UBERON:0001869!2.78e-08!32;UBERON:0002791!4.78e-08!33;UBERON:0002619!1.59e-07!22;UBERON:0001950!2.71e-07!20;UBERON:0003135!3.10e-07!11;UBERON:0000153!5.28e-07!129;UBERON:0007811!5.28e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.11e-16!115;UBERON:0005743!6.24e-15!86;UBERON:0000073!4.78e-14!94;UBERON:0001016!4.78e-14!94;UBERON:0001017!2.68e-13!82;UBERON:0001049!2.27e-12!57;UBERON:0005068!2.27e-12!57;UBERON:0006241!2.27e-12!57;UBERON:0007135!2.27e-12!57;UBERON:0002616!2.06e-11!59;UBERON:0000955!7.96e-11!69;UBERON:0006238!7.96e-11!69;UBERON:0002020!7.64e-10!34;UBERON:0003528!7.64e-10!34;UBERON:0003075!2.31e-09!86;UBERON:0007284!2.31e-09!86;UBERON:0002346!2.64e-09!90;UBERON:0002780!4.58e-09!41;UBERON:0001890!4.58e-09!41;UBERON:0006240!4.58e-09!41;UBERON:0003080!1.06e-08!42;UBERON:0001893!1.27e-08!34;UBERON:0001869!2.78e-08!32;UBERON:0002791!4.78e-08!33;UBERON:0002619!1.59e-07!22;UBERON:0001950!2.71e-07!20;UBERON:0003135!3.10e-07!11;UBERON:0000153!5.28e-07!129;UBERON:0007811!5.28e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.11e-07;10!UBERON:0000158;1.11e-07;10!UBERON:0003124;2.36e-07;3!UBERON:0000920;2.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.36e-07,3 | |||
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| ||
|short_description=p6@PTGDS | |short_description=p6@PTGDS | ||
}} | }} |
Latest revision as of 14:34, 16 September 2015
Short description: | p6@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTGDS_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 47bp_to_ENST00000460340_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.02e-13 | 5 |
plasmacytoid dendritic cell | 2.60e-13 | 3 |
germ line cell | 1.16e-10 | 7 |
germ cell | 1.16e-10 | 7 |
central nervous system pericyte | 6.02e-10 | 2 |
chorionic membrane mesenchymal stem cell | 2.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.34e-07 | 22 |
germ cell cancer | 7.34e-07 | 22 |