FFCP PHASE1:Hg19::chr1:12678241..12678252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:12678241..12678252,-
|short_description=p11@DHRS3
|description=CAGE_peak_11_at_DHRS3_5end
|association_with_transcript=-421bp_to_NM_004753,uc001auc.2,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=-421bp_to_NM_004753,uc001auc.2,uc001aud.3,uc009vnm.2_5end | |||
|cluster_id=chr1:12678241..12678252,- | |||
|coexpression_cluster_id=C928 | |||
|description=CAGE_peak_11_at_DHRS3_5end | |||
|id=chr1:12678241..12678252,- | |||
|ontology_enrichment_celltype=CL:0000222!9.88e-19!119;CL:0000183!9.48e-17!59;CL:0000187!1.04e-16!54;CL:0000192!1.61e-15!42;CL:0000514!1.61e-15!42;CL:0000680!4.78e-15!57;CL:0000056!4.78e-15!57;CL:0000355!4.78e-15!57;CL:0000359!6.07e-15!32;CL:0000393!2.35e-14!60;CL:0000211!2.35e-14!60;CL:0000220!3.51e-13!246;CL:0002321!6.97e-13!248;CL:0000055!2.95e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.07e-15;32!CL:0000192;1.02e-10;43!CL:0000187;2.97e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.15e-15,32;CL:0000187,5.83e-15,55;CL:0000192,1.66e-14,43;CL:0000514,1.66e-14,43;CL:0000680,1.17e-13,58;CL:0000056,1.17e-13,58;CL:0000355,1.17e-13,58;CL:0000222,1.53e-12,121;CL:0000393,1.69e-12,61;CL:0000211,1.69e-12,61;CL:0002321,5.65e-11,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.02e-10;43!CL:0000355;6.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.36e-18!138;UBERON:0000119!3.73e-16!312;UBERON:0000483!4.91e-16!309;UBERON:0002100!2.25e-15!216;UBERON:0003914!4.05e-15!118;UBERON:0001134!4.51e-15!61;UBERON:0002036!4.51e-15!61;UBERON:0003082!4.51e-15!61;UBERON:0002385!1.50e-14!63;UBERON:0001015!1.50e-14!63;UBERON:0000383!1.50e-14!63;UBERON:0005256!5.30e-14!143;UBERON:0000475!6.44e-14!365;UBERON:0004111!9.51e-14!241;UBERON:0001637!1.71e-13!42;UBERON:0003509!1.71e-13!42;UBERON:0004572!1.71e-13!42;UBERON:0000477!4.45e-13!286;UBERON:0000025!1.94e-11!194;UBERON:0004573!2.96e-11!33;UBERON:0004571!2.96e-11!33;UBERON:0000481!3.32e-11!347;UBERON:0004290!1.44e-10!70;UBERON:0001981!2.29e-10!60;UBERON:0007500!2.29e-10!60;UBERON:0004537!2.29e-10!60;UBERON:0006965!2.29e-10!60;UBERON:0002049!4.86e-10!79;UBERON:0007798!4.86e-10!79;UBERON:0003104!1.42e-09!238;UBERON:0009142!1.42e-09!238;UBERON:0000486!3.67e-09!82;UBERON:0000055!7.49e-09!69;UBERON:0004872!8.92e-09!84;UBERON:0003064!2.83e-08!37;UBERON:0007625!4.98e-08!11;UBERON:0000914!6.97e-08!83;UBERON:0002329!6.97e-08!83;UBERON:0003077!6.97e-08!83;UBERON:0003059!6.97e-08!83;UBERON:0007282!6.97e-08!83;UBERON:0009618!6.97e-08!83;UBERON:0007285!6.97e-08!83;UBERON:0004535!4.85e-07!110;UBERON:0003886!5.24e-07!63;UBERON:0001009!6.60e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.27e-13;11!UBERON:0004573;7.41e-10;33!UBERON:0004571;7.41e-10;33!UBERON:0001637;5.82e-09;42!UBERON:0003509;5.82e-09;42!UBERON:0004572;5.82e-09;42!UBERON:0000970;1.62e-08;20!UBERON:0000020;2.51e-08;23!UBERON:0002104;6.18e-08;21!UBERON:0000019;6.81e-08;19!UBERON:0000047;6.81e-08;19!UBERON:0004088;6.81e-08;19!UBERON:0010230;6.81e-08;19!UBERON:0001032;8.20e-08;24!UBERON:0004456;8.20e-08;24!UBERON:0001456;7.98e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.39e-13,42;UBERON:0003509,2.39e-13,42;UBERON:0004572,2.39e-13,42;UBERON:0007625,2.82e-13,11;UBERON:0001134,3.41e-13,62;UBERON:0002036,3.41e-13,62;UBERON:0003082,3.41e-13,62;UBERON:0007503,6.77e-13,78;UBERON:0002385,1.84e-12,64;UBERON:0001015,1.84e-12,64;UBERON:0000383,1.84e-12,64;UBERON:0002100,3.23e-12,199;UBERON:0005256,4.30e-12,122;UBERON:0003104,7.22e-11,160;UBERON:0009142,7.22e-11,160;UBERON:0004573,7.49e-11,33;UBERON:0004571,7.49e-11,33;UBERON:0002329,2.91e-10,71;UBERON:0003059,2.91e-10,71;UBERON:0007282,2.91e-10,71;UBERON:0004290,2.91e-10,71;UBERON:0009618,2.91e-10,71;UBERON:0003077,5.49e-10,72;UBERON:0007285,5.49e-10,72;UBERON:0000490,6.38e-10,148;UBERON:0007524,1.01e-09,73;UBERON:0003914,1.04e-09,117;UBERON:0000486,5.98e-09,83;UBERON:0000970,6.35e-08,21;UBERON:0002104,6.35e-08,21;UBERON:0000020,8.58e-08,24;UBERON:0001032,8.58e-08,24;UBERON:0004456,8.58e-08,24;UBERON:0002049,1.96e-07,78;UBERON:0007798,1.96e-07,78;UBERON:0000119,2.19e-07,309;UBERON:0007500,2.53e-07,59;UBERON:0001981,2.53e-07,59;UBERON:0004537,2.53e-07,59;UBERON:0006965,2.53e-07,59;UBERON:0000019,2.88e-07,20;UBERON:0000047,2.88e-07,20;UBERON:0010312,2.88e-07,20;UBERON:0004088,2.88e-07,20;UBERON:0010230,2.88e-07,20;UBERON:0003072,2.88e-07,20;UBERON:0004128,2.88e-07,20;UBERON:0003071,2.88e-07,20;UBERON:0000483,3.45e-07,306 | |||
|phase1_expression=0.908391896352783,0.214100523890983,2.25527046553554,0,2.23480547213644,0,0,0.631719873426831,1.56711376919903,4.66894479352867,2.09340350391728,0.218441372130172,0,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,2.92124036154949,0.487932798790507,3.44738962615006,2.44800829493104,2.82109249330279,2.28988789704845,0.547497700291537,1.00434111675842,0.229240217243854,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0.515151135268373,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,8.04841031644363,4.47518966452356,0,1.00267582127178,0.434539556882471,0,0.486634870302636,2.07976597760949,2.21729397462564,4.30390449896318,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,1.69592382577203,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,0.33472061276467,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0.25326102332916,0.397227542439656,0.860509862246441,1.41867352879343,0.560677600142307,5.33744978648525,0.98667019366864,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,0,0.45071417671979,1.13432183160021,0.358779271377724,0.427114777637135,0.423863802319124,0,0.412210116953756,0.515281080091258,0.558350568994769,0.337552664482532,0.292311015483596,0.252433774244115,0.644349290496095,2.26304479546337,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.348581828608555,0,0,0.36497735907583,0,0,0,0.928735856063958,1.44375896333917,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,3.2925920906512,0,0,2.94848165003288,0.590789906681404,0,0.245976877086227,4.80389868835872,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,2.31860809950154,4.3441216867254,1.01056513432752,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0.112131084345361,5.23152082599936,0,2.19761916788222,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0,0,3.01439377059586,3.48613383440118,3.19913571782583,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0,1.66376689224646,0.178428988797162,0.473107245101804,0.35142424497814,0.601892199455438,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,1.02511319404561,2.04682899626681,0.64341568457443,2.96836132889982,0.154209693802656,0.355123450626254,0.574890092096664,1.03850885836724,0.464841513839837,0.725156697549733,0.802025881213139,0.460404944679482,3.4444334449382,0.910455840033585,4.327105693661,0.902399225814824,1.07821471946181,1.56869953835371,0,2.84989398010764,1.13733384070897,0.680374821106063,0.431831832204279,3.08454505380579,9.212178876491,13.0439341202262,0.764628819135115,0,2.23874754722178,0,0,5.64190275256056,15.4166883478862,3.57916234130733,1.33953315142039,1.09883357782012,0.495056999523528,0,0,1.6068392984416,1.35339005608971,0.616194468458578,0.307007349452259,0.275673144969061,1.6113036730241,0.725083469571143,0.511359764496605,2.31483292681517,0.165284915360978,0,0,0.2023155617111,0.464845549297286,2.20368642781448,2.0911118104818,2.46426864140871,2.66153015158511,2.60979897622522,4.44778125849408,2.86249773483982,0.372158369359667,0.632758849437452,0.762520775695299,0,0,2.86382923133343,8.63443504219153,0.719489830333259,0.54907405947211,0.589062011728432,2.83055474202642,3.17020642346017,2.10629228119491,1.95053495635836,3.41198885483798,4.22600587027022,3.00299805097569,3.81794666275024,2.26016233240486,13.7841335886531,3.3171948762061,0.876901770507525,0.578775534266688,0,3.65238678532867,1.239293992399,1.40847801266121,0.860468113224309,0.589494246078727,1.426684205925,1.06428319221179,0.844430541190656,1.97576935775941,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,7.35120647943095,0,0,0,0.159426272728822,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,2.81974010175699,0,1.61158997199083,0,0,1.70481688083848,0.23874448473769,0,0.307160702099232,0,0.281338832821026,3.22795244566427,0,0,0.597743964753209,0.276283915531148,0.503865495708552,1.43176155503017,0,0,0.449341755736634,0.358042349351218,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,2.89999830173917,4.66553137970549,2.79679015322043,0.472775363535873,0,0.291604613383254,0,0,0,0,0,0,0.438770794307945,0.10893846351899,0.41827123283581,1.00035336054936,0,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| ||
|short_description=p11@DHRS3 | |||
}} | }} |
Latest revision as of 14:33, 16 September 2015
Short description: | p11@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_DHRS3_5end |
Coexpression cluster: | C928_Retinal_Cardiac_mesothelioma_Renal_Meningeal_Smooth_Astrocyte |
Association with transcript: | -421bp_to_NM_004753, uc001auc.2, uc001aud.3, uc009vnm.2_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.15e-15 | 32 |
muscle cell | 5.83e-15 | 55 |
smooth muscle cell | 1.66e-14 | 43 |
smooth muscle myoblast | 1.66e-14 | 43 |
muscle precursor cell | 1.17e-13 | 58 |
myoblast | 1.17e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-13 | 58 |
mesodermal cell | 1.53e-12 | 121 |
electrically responsive cell | 1.69e-12 | 61 |
electrically active cell | 1.69e-12 | 61 |
embryonic cell | 5.65e-11 | 250 |