FFCP PHASE1:Hg19::chr11:126138954..126138970,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26927 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000533839_5end | |||
|cluster_id=chr11:126138954..126138970,+ | |||
|description=CAGE_peak_3_at_FOXRED1_5end | |||
|id=chr11:126138954..126138970,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.42e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;9.00e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,3.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-22!115;UBERON:0001049!2.33e-21!57;UBERON:0005068!2.33e-21!57;UBERON:0006241!2.33e-21!57;UBERON:0007135!2.33e-21!57;UBERON:0002616!2.18e-19!59;UBERON:0002346!2.81e-18!90;UBERON:0003075!3.85e-18!86;UBERON:0007284!3.85e-18!86;UBERON:0000955!1.72e-17!69;UBERON:0006238!1.72e-17!69;UBERON:0002780!4.21e-16!41;UBERON:0001890!4.21e-16!41;UBERON:0006240!4.21e-16!41;UBERON:0003080!3.02e-15!42;UBERON:0000073!4.06e-15!94;UBERON:0001016!4.06e-15!94;UBERON:0001017!4.10e-15!82;UBERON:0005743!1.11e-14!86;UBERON:0001893!6.21e-14!34;UBERON:0002020!1.50e-13!34;UBERON:0003528!1.50e-13!34;UBERON:0002791!2.20e-13!33;UBERON:0001869!1.33e-12!32;UBERON:0003056!1.71e-12!61;UBERON:0000033!5.50e-12!123;UBERON:0000153!8.82e-12!129;UBERON:0007811!8.82e-12!129;UBERON:0000924!1.90e-10!173;UBERON:0006601!1.90e-10!173;UBERON:0002619!3.11e-10!22;UBERON:0004121!3.67e-10!169;UBERON:0000956!2.94e-09!25;UBERON:0000203!2.94e-09!25;UBERON:0001950!4.56e-09!20;UBERON:0000481!2.85e-08!347;UBERON:0000062!4.22e-08!511;UBERON:0003076!2.13e-07!15;UBERON:0003057!2.13e-07!15;UBERON:0004732!9.27e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.07e-25;53!UBERON:0002616;1.07e-25;53!UBERON:0001893;1.08e-24;34!UBERON:0002791;1.46e-23;32!UBERON:0002780;1.88e-23;41!UBERON:0001890;1.88e-23;41!UBERON:0002619;6.37e-23;22!UBERON:0003528;2.98e-22;34!UBERON:0002020;2.98e-22;34!UBERON:0001950;2.24e-21;20!UBERON:0001869;6.17e-21;32!UBERON:0000956;6.38e-20;25!UBERON:0000203;6.38e-20;25!UBERON:0004732;4.88e-16;13!UBERON:0001017;7.16e-15;75!UBERON:0000955;1.26e-14;68!UBERON:0002298;2.26e-14;6!UBERON:0004733;3.29e-13;12!UBERON:0002028;3.29e-13;12!UBERON:0001016;9.05e-13;83!UBERON:0001872;1.67e-11;5!UBERON:0001896;3.07e-11;3!UBERON:0005290;3.07e-11;3!UBERON:0000200;8.36e-10;6!UBERON:0002420;1.07e-09;9!UBERON:0000125;1.07e-09;9!UBERON:0007245;1.07e-09;9!UBERON:0002308;1.07e-09;9!UBERON:0010009;1.07e-09;9!UBERON:0010011;1.07e-09;9!UBERON:0000454;1.07e-09;9!UBERON:0005162;9.47e-09;2!UBERON:0000122;9.47e-09;2!UBERON:0009663;2.10e-08;7!UBERON:0002771;3.43e-08;2!UBERON:0001871;3.57e-08;6!UBERON:0000349;6.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.58e-42,56;UBERON:0005068,8.58e-42,56;UBERON:0006241,8.58e-42,56;UBERON:0007135,8.58e-42,56;UBERON:0000073,3.80e-41,53;UBERON:0002616,3.80e-41,53;UBERON:0003075,1.16e-35,82;UBERON:0007284,1.16e-35,82;UBERON:0000955,2.38e-35,68;UBERON:0006238,2.38e-35,68;UBERON:0002346,1.22e-33,86;UBERON:0001017,2.62e-33,81;UBERON:0001016,1.32e-31,89;UBERON:0002780,5.19e-29,41;UBERON:0001890,5.19e-29,41;UBERON:0003080,5.19e-29,41;UBERON:0006240,5.19e-29,41;UBERON:0001893,1.60e-28,34;UBERON:0003528,2.01e-28,34;UBERON:0002020,2.01e-28,34;UBERON:0002791,6.06e-27,32;UBERON:0010371,1.88e-26,104;UBERON:0003056,2.15e-24,61;UBERON:0010314,8.85e-24,132;UBERON:0001869,1.39e-23,32;UBERON:0002619,4.16e-23,22;UBERON:0007023,3.39e-22,114;UBERON:0001950,1.45e-21,20;UBERON:0000956,4.39e-20,25;UBERON:0000203,4.39e-20,25;UBERON:0004121,1.25e-18,171;UBERON:0000924,1.25e-18,171;UBERON:0006601,1.25e-18,171;UBERON:0004732,2.75e-16,13;UBERON:0000025,8.12e-15,192;UBERON:0002298,3.24e-14,6;UBERON:0011216,3.70e-14,223;UBERON:0003076,9.95e-14,15;UBERON:0003057,9.95e-14,15;UBERON:0004733,1.92e-13,12;UBERON:0002028,1.92e-13,12;UBERON:0007277,1.92e-13,12;UBERON:0001872,4.69e-11,5;UBERON:0001896,5.63e-11,3;UBERON:0005290,5.63e-11,3;UBERON:0010096,5.63e-11,3;UBERON:0004111,5.99e-11,240;UBERON:0000200,7.39e-10,6;UBERON:0002420,7.41e-10,9;UBERON:0007245,7.41e-10,9;UBERON:0010009,7.41e-10,9;UBERON:0010011,7.41e-10,9;UBERON:0000454,7.41e-10,9;UBERON:0000125,7.84e-10,9;UBERON:0002308,7.84e-10,9;UBERON:0005162,1.03e-08,2;UBERON:0000122,1.03e-08,2;UBERON:0009663,1.93e-08,7;UBERON:0001871,2.09e-08,6;UBERON:0002771,2.56e-08,2;UBERON:0000483,4.29e-08,306;UBERON:0000119,6.25e-08,309;UBERON:0000349,4.89e-07,5;UBERON:0002021,6.39e-07,5 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.861847406537515,0.204000691244253,0.940364164434263,0,0.136874425072884,0.376627918784408,0.152826811495903,0,0,0.393364276848904,0,0.309632246632152,0,0,1.10926203050036,0.154934401160603,0,0,0,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0.637130828648193,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.654895377488563,0.364295288292542,1.11235332835329,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0.488124115096339,0,0,0.267899184852239,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,0.454072282934794,1.15235184896,0.70296429550139,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0,0,0.427114777637135,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.460249493211497,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0.505754070234305,0,0.220587945464788,0.435758888184812,0,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0.245976877086227,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0.53735113621709,0.290633938513962,0,0.985326475791887,0,0.414656231081544,0.432359860250884,0.25248486685276,0.126995788584338,0.763976851116555,0,0,0.308482478109971,0,0,0,0,0.1466765716419,0.517086863031111,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.320182673410333,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0,0,0,0.532685175939381,0.0821271560138091,0,0,0.483437798366489,0,0.552485933615378,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.15403067420883,2.35304930753057,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0.438519753291869,0,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.340906509664404,0,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0.429374660225974,0.372158369359667,0,0,0,0.855877976067841,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0.75894634753143,0.699869440489966,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0.106824071127473,1.92495971052672,0.245040215981032,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0.280797178113459,0.684704037099577,0,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0,0.390776190804081,0,0,0,0.33307196799782,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0.284136146806413,0.95497793895076,0.593929361665277,1.22864280839693,0,1.68803299692615,0.333926115068718,0.329607748453519,0,0.19924798825107,0.552567831062295,0,0.20453736500431,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0.463840490809256,3.99227596002388,0.520855522170466,0.0874599999961957,0,0.341380344856499,0,0.709163045303809,0,0,0.520874984799877,0.885741385813839,1.32656082487949,0,1.99042667876204,1.77328571372128,1.53569778007781,0,0.557694977114413,0.153900517007594,0.341826167541004,0.23056390438806,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0,0.104421949505455,2.08943512240099,0,0.702793337176017,0,0.586993856796269,0,0.789168805698781,0,0,0.252746318513952,0.60129367765797,0.207376382794494,0.664653872707185,0.330991955875499,0,3.58417289318877,0,0.277349346026277,0,0.293977192243133,0.0870592065804026,0.52418000472609,1.0319161948297,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0,1.12990370390266,0.137041924646751,0.596143835108969,0.759729551470544,0,0.0801588202515337,0.640358984218058,0.19980960958213,0.288180834308212,0.343609788497747,0.514784993585894,0.432164393964449,0.248505071130865,0.235694034616795,0.67952103036807,0,0.509991088181609,0.288950589901519,0.600420288709789,2.60120219894787,0,0,0.262887354279314,0.558564802544508,1.83328339209347,0,0.798716001995964,0.429226048136571,0.669514372325618,0.403100834920358,1.08089965062721,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0.795229689809303,2.31545790389679,0,0,0,0.2249738915515,0,0.91124334987037,0.335434687599266,0.0788057072991982,0.367182116944987,0,0.179287339332845,0.575745591958336,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0.339936274560377,0.293104467356165,1.32506888912221,0.387848869084652,1.58679122091228,0,0,0,0,0.414239055347196,0.496166021811951,0.197611631897944,0,0,1.08803560673895,1.0027595760908,0.919036730290385,0.655745261419609,0,0.886068179966986,1.58634144372552,2.6290095448365,1.14681839138014,2.88415533995816,1.1177352529449,0,0,0.303298235083296,0.285465333544967,0,0,0,0.149254802886874,0.934853239388898,0.554805861502613,0.568209015825267,0,0.889811221596536,0.686520205190771,0.302461847526478,0.466311601748341,0.591420599958536,0,0,0.621051827505038,0,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.363697318405119,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,2.07387654227596,0.194860308839388,0.398594520940089,0.327130788511688,0.655219697692825,0,0.422624246717254,0,0.106691729694141,0.172214979660816,0,0,0.699397538597222,0,0.383683113910955,0.107824811396682,0.471797825567689,0.109209638192014,0.169732529954025,0.212574920101683,0.247871528518004,0,0.318004350653419,0,0,0,0.3062454773532,1.28458450192919,1.41696576325585,1.75597244962866,1.43581454968528,0.504143392443436,0.760729777106397,1.61475645631851,4.28308260777463,0.392590874004102,0,0.183428598521679,0,0.381382095467167,0,0,0.376051641746286,0.20170506870352,0,0.261906694481422,0.327543835020193,0,0.945526184657525,0.781078098613847,3.9270491335225,1.07806877329642,1.09394961803644,0,0.496211178389294,0.351742488719241,0.766574565837572,0.535701835878287,2.01770233331294,0.606965604236632,0.91064876540519,0.0887023701626388,0.345701962667338,0.342976018874837,1.15548546060614,1.18390992413128,0.118193840883968,0,0.941917114206168,0.314231179832004,0.280272163313789,0.913158720509496,0.647782773655864,0,0.929195074296532,0,0.23248285073625,0.173858272302579,0.801711364730253,0,0.17071847709395,0.691259661814092,0.430227358820278,0.354996002191696,0.0852134047591577,0.846774100381858,0,0,0,0.111855431797792,0.883352102537187,0.365753774946808,0,0.410651227424988,0,0,1.16969731731053,0,0,0.22589216407792,0,0.150962843566674,0.231522474323834,0.655678681511872,0,0.735444965261716,0.707029641304878,0.785233868459781,1.48523200163543,0.4226557275834,0.339854229375634,0.187967835959707,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0.722172300202514,0.730336388246517,0.458729283404541,2.29343333042322,0.157771562193185,1.35982980381829,0.872701380680755,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.303114792872958,0.267964130156178,0,1.96522692137601,0.852935927603924,0.23806443146374,0.129177819672012,0.31037357147929,0.560659312903067,0.318235791390825,0.202117188958219,0.435433495793923,1.02669990325584,0.0673520530145875,0.143444410785353,0.665320713092027,0.0814032686109745,0,0,0.0898252021065869,0,0.611207220914332,1.22068853494722,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@FOXRED1 | |||
}} |
Latest revision as of 14:03, 16 September 2015
Short description: | p3@FOXRED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXRED1_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000533839_5end |
EntrezGene: | FOXRED1 |
HGNC: | 26927 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.17e-07 | 2 |