FFCP PHASE1:Hg19::chr5:156887244..156887258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348938 | |EntrezGene=348938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28018 | |HGNC=28018 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000519150_5end | |association_with_transcript=-4bp_to_ENST00000519150_5end | ||
|cluster_id=chr5:156887244..156887258,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_NIPAL4_5end | |description=CAGE_peak_2_at_NIPAL4_5end | ||
|id=chr5:156887244..156887258,+ | |id=chr5:156887244..156887258,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.28e-25!42;CL:0000860!1.78e-22!45;CL:0002009!8.35e-21!65;CL:0000766!2.88e-20!76;CL:0002194!1.84e-19!63;CL:0000576!1.84e-19!63;CL:0000040!1.84e-19!63;CL:0000559!1.84e-19!63;CL:0000557!1.39e-18!71;CL:0000738!8.60e-17!140;CL:0000839!7.39e-16!70;CL:0002087!1.01e-14!119;CL:0002031!7.36e-13!124;CL:0000988!9.27e-11!182;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0002076!3.51e-07!43 | |ontology_enrichment_celltype=CL:0002057!3.28e-25!42;CL:0000860!1.78e-22!45;CL:0002009!8.35e-21!65;CL:0000766!2.88e-20!76;CL:0002194!1.84e-19!63;CL:0000576!1.84e-19!63;CL:0000040!1.84e-19!63;CL:0000559!1.84e-19!63;CL:0000557!1.39e-18!71;CL:0000738!8.60e-17!140;CL:0000839!7.39e-16!70;CL:0002087!1.01e-14!119;CL:0002031!7.36e-13!124;CL:0000988!9.27e-11!182;CL:0000763!1.25e-10!112;CL:0000049!1.25e-10!112;CL:0000037!2.34e-10!172;CL:0000566!2.34e-10!172;CL:0002032!3.20e-09!165;CL:0000837!3.20e-09!165;CL:0002076!3.51e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.92e-37;33!CL:0002057;7.92e-37;33!CL:0000473;4.48e-30;39!CL:0000234;4.48e-30;39!CL:0000576;2.44e-19;48!CL:0000766;2.25e-14;69!CL:0000244;5.32e-08;4!CL:0000731;5.32e-08;4!CL:0002087;5.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.49e-37,42;CL:0002057,3.49e-37,42;CL:0000473,4.92e-37,48;CL:0000234,4.92e-37,48;CL:0002009,4.49e-31,61;CL:0000766,4.26e-29,72;CL:0002194,8.02e-29,59;CL:0000576,8.02e-29,59;CL:0000040,8.02e-29,59;CL:0000559,8.02e-29,59;CL:0000557,1.10e-28,67;CL:0000839,1.50e-24,66;CL:0000738,1.32e-18,136;CL:0000763,3.45e-18,108;CL:0000049,3.45e-18,108;CL:0002087,3.69e-16,115;CL:0002031,4.21e-15,120;CL:0000037,5.90e-13,168;CL:0000988,3.17e-12,177;CL:0002032,4.53e-12,161;CL:0000837,4.53e-12,161;CL:0000244,5.39e-08,4;CL:0000731,5.39e-08,4 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-14!80;UBERON:0002390!4.94e-13!102;UBERON:0003061!4.94e-13!102;UBERON:0001474!2.12e-12!86;UBERON:0001049!3.89e-12!57;UBERON:0005068!3.89e-12!57;UBERON:0006241!3.89e-12!57;UBERON:0007135!3.89e-12!57;UBERON:0002193!6.96e-11!112;UBERON:0004765!1.83e-10!101;UBERON:0001434!1.83e-10!101;UBERON:0001893!1.99e-10!34;UBERON:0002020!2.81e-10!34;UBERON:0003528!2.81e-10!34;UBERON:0002780!3.09e-10!41;UBERON:0001890!3.09e-10!41;UBERON:0006240!3.09e-10!41;UBERON:0002791!7.93e-10!33;UBERON:0003080!8.85e-10!42;UBERON:0000033!2.25e-09!123;UBERON:0003056!2.88e-09!61;UBERON:0003075!3.05e-09!86;UBERON:0007284!3.05e-09!86;UBERON:0000062!4.58e-09!511;UBERON:0001869!4.61e-09!32;UBERON:0005743!7.05e-09!86;UBERON:0002616!1.22e-08!59;UBERON:0000153!1.31e-08!129;UBERON:0007811!1.31e-08!129;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0002346!3.03e-08!90;UBERON:0001017!3.03e-08!82;UBERON:0000073!6.43e-08!94;UBERON:0001016!6.43e-08!94;UBERON:0004121!1.06e-07!169;UBERON:0007023!1.36e-07!115;UBERON:0002050!2.03e-07!605;UBERON:0005423!2.03e-07!605;UBERON:0000922!2.75e-07!612;UBERON:0002405!3.28e-07!115;UBERON:0000923!3.38e-07!604;UBERON:0005291!3.38e-07!604;UBERON:0006598!3.38e-07!604;UBERON:0002532!3.38e-07!604;UBERON:0000924!4.14e-07!173;UBERON:0006601!4.14e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.81e-24,76;UBERON:0001474,3.33e-21,82;UBERON:0004765,2.92e-18,90;UBERON:0002390,8.35e-18,98;UBERON:0003061,8.35e-18,98;UBERON:0002405,2.70e-17,93;UBERON:0001434,3.09e-16,100;UBERON:0002193,4.84e-15,108;UBERON:0001049,1.72e-12,56;UBERON:0005068,1.72e-12,56;UBERON:0006241,1.72e-12,56;UBERON:0007135,1.72e-12,56;UBERON:0010371,3.64e-11,104;UBERON:0000073,4.44e-10,53;UBERON:0002616,4.44e-10,53;UBERON:0003075,1.36e-09,82;UBERON:0007284,1.36e-09,82;UBERON:0002346,8.64e-09,86;UBERON:0002780,2.23e-08,41;UBERON:0001890,2.23e-08,41;UBERON:0003080,2.23e-08,41;UBERON:0006240,2.23e-08,41;UBERON:0000955,6.11e-08,68;UBERON:0006238,6.11e-08,68;UBERON:0001017,7.68e-08,81;UBERON:0005423,8.41e-08,581;UBERON:0000923,8.99e-08,560;UBERON:0010316,8.99e-08,560;UBERON:0005291,8.99e-08,560;UBERON:0006598,8.99e-08,560;UBERON:0010317,8.99e-08,560;UBERON:0002532,8.99e-08,560;UBERON:0002050,1.55e-07,564;UBERON:0001893,2.42e-07,34;UBERON:0003056,3.08e-07,61;UBERON:0003528,3.49e-07,34;UBERON:0002020,3.49e-07,34;UBERON:0000922,3.62e-07,592;UBERON:0001016,3.70e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.376627918784408,0.0764134057479513,0.0821005894499457,0,4.32700704533794,2.30297638858328,3.56077083626975,0.919421224478927,5.4217065380085,3.32778609150109,0,0,0,31.0237428777851,44.9219562333117,23.2201631665961,0,0.32389366601898,0,0.726991193897824,3.40088349319928,1.21292030593908,5.34586784883075,17.2690512969167,50.791844826797,12.6584652621746,22.79830288109,42.8032836098339,18.2715210790408,47.7658665852031,86.6729514203787,5.45902784673554,4.91231070104122,6.06753408001728,15.610278510916,16.3673803808808,53.0649814413204,1.64925650093358,9.3747919082167,8.95071976118658,26.9894591924583,39.7169657283798,58.545291405584,9.79869794501299,30.2460092683717,36.0533482210494,10.2917915447673,29.8304885149927,42.4059599170785,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0,0.800791974072025,0,0.661044872784862,0,4.55370375287559,5.87237189370939,3.82273228125229,1.32171328579026,10.0891541336676,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0.392937226493138,6.55731518926576,3.70784442784429,0,0,0.132957960518865,1.43094374583205,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,3.05265836499774,0,0,0,0,0,0.560677600142307,0,1.48000529050296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0.966304265816484,4.09119180886252,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,2.08525542276389,7.86812272803337,1.91005047582099,1.38882667737794,0,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,1.17002132569619,0.148631162288728,0,0.16798212819886,0.567100388969546,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,1.50999940573032,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,2.85451065701279,0,0,0,2.25599806453706,0.385076685522074,0,1.46139224653261,0.422206515571503,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0.512900250232778,0,1.62689197332152,0,0,0,24.6934181338354,13.0012049207304,0,0,0,0,0,0,0,0,0,2.14870389969272,1.15314040419064,1.53135254993501,3.54052232994425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,3.27155183266741,1.34060455107157,0,0.0941438007767792,9.04061282609583,18.5318623234388,20.8412172162238,13.3239572120036,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.789147245095469,0,0,3.87733098438087,1.76259386507517,0,0,0,0,1.137934482855,0,0.472775363535873,0,0,0.347249989866585,0,0.60298219312704,0,0.221158519862449,0,0.219385397153973,0,9.89908584378083,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0,0.296521128680622,0.617819694732514,0.208843899010911,14.9630515217103,0,4.68528891450678,0,0.391329237864179,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.881931576729399,0.0870592065804026,0,0,0,0,0,0.387956065953678,0,0,0,0.19871461170299,1.96263467463224,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.707082103850386,0.135904206073614,0.209205692624666,0,0,7.20504346451747,3.42263447229983,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,1.349843349309,15.476039091159,1.70098758642469,6.03782437678679,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36135686540031,1.58679122091228,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.976210119215705,0.876336514945499,0,2.3295100822739,8.50720720296953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,1.39991177098451,0.213383459388282,0,0,0,4.05650572386389,6.8428498603627,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,2.376481328569,0,0.319267718114302,3.48697819209284,0,2.83544735103293,1.61475645631851,34.2646608621971,0,0,4.4022863645203,1.38630799380406,0,0,0,0,0,0,0,0,0.295712172434091,2.63396580011739,1.56215619722769,0.620060389503552,4.24885928299176,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,0,0.576169937778896,0,6.4571246327990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| ||
|short_description=p2@NIPAL4 | |short_description=p2@NIPAL4 | ||
}} | }} |
Latest revision as of 13:57, 16 September 2015
Short description: | p2@NIPAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NIPAL4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -4bp_to_ENST00000519150_5end |
EntrezGene: | NIPAL4 |
HGNC: | 28018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.49e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-37 | 42 |
defensive cell | 4.92e-37 | 48 |
phagocyte | 4.92e-37 | 48 |
macrophage dendritic cell progenitor | 4.49e-31 | 61 |
myeloid leukocyte | 4.26e-29 | 72 |
monopoietic cell | 8.02e-29 | 59 |
monocyte | 8.02e-29 | 59 |
monoblast | 8.02e-29 | 59 |
promonocyte | 8.02e-29 | 59 |
granulocyte monocyte progenitor cell | 1.10e-28 | 67 |
myeloid lineage restricted progenitor cell | 1.50e-24 | 66 |
leukocyte | 1.32e-18 | 136 |
myeloid cell | 3.45e-18 | 108 |
common myeloid progenitor | 3.45e-18 | 108 |
nongranular leukocyte | 3.69e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.21e-15 | 120 |
hematopoietic stem cell | 5.90e-13 | 168 |
hematopoietic cell | 3.17e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.53e-12 | 161 |
transitional epithelial cell | 5.39e-08 | 4 |
urothelial cell | 5.39e-08 | 4 |