FFCP PHASE1:Hg19::chr7:136553339..136553348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1951 | |||
|TSSclassifier=strong | |||
|UniProt=A4D1Q0,P08172,Q6SL56,Q86SJ1 | |||
|association_with_transcript=-50bp_to_NM_001006627,NM_001006630,uc003vtf.1,uc003vtg.1_5end | |||
|cluster_id=chr7:136553339..136553348,+ | |||
|description=CAGE_peak_11_at_CHRM2_5end | |||
|id=chr7:136553339..136553348,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;9.43e-11;3!CL:0000333;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.05e-29;1!UBERON:0004140;2.05e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;2.05e-29;1!DOID:3350;1.91e-15;2!DOID:3307;1.91e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,3.16e-29,1;DOID:3307,1.33e-15,2;DOID:3350,2.37e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-35!57;UBERON:0005068!1.13e-35!57;UBERON:0006241!1.13e-35!57;UBERON:0007135!1.13e-35!57;UBERON:0007023!2.40e-33!115;UBERON:0001950!5.57e-33!20;UBERON:0002619!9.60e-30!22;UBERON:0002616!3.89e-29!59;UBERON:0002020!4.96e-29!34;UBERON:0003528!4.96e-29!34;UBERON:0002346!6.69e-29!90;UBERON:0003075!1.10e-28!86;UBERON:0007284!1.10e-28!86;UBERON:0001017!7.69e-28!82;UBERON:0001869!1.15e-27!32;UBERON:0000955!1.43e-27!69;UBERON:0006238!1.43e-27!69;UBERON:0000073!1.49e-26!94;UBERON:0001016!1.49e-26!94;UBERON:0005743!3.49e-26!86;UBERON:0000956!7.97e-26!25;UBERON:0000203!7.97e-26!25;UBERON:0001893!8.53e-26!34;UBERON:0002780!9.82e-26!41;UBERON:0001890!9.82e-26!41;UBERON:0006240!9.82e-26!41;UBERON:0003080!5.28e-25!42;UBERON:0002791!8.55e-24!33;UBERON:0003056!2.75e-17!61;UBERON:0000924!1.15e-15!173;UBERON:0006601!1.15e-15!173;UBERON:0004121!3.31e-15!169;UBERON:0000033!1.91e-13!123;UBERON:0002298!2.73e-13!8;UBERON:0001871!1.27e-12!7;UBERON:0000153!1.74e-12!129;UBERON:0007811!1.74e-12!129;UBERON:0000200!7.40e-12!6;UBERON:0003076!1.01e-11!15;UBERON:0003057!1.01e-11!15;UBERON:0000025!1.08e-11!194;UBERON:0004111!2.44e-11!241;UBERON:0002021!1.62e-10!5;UBERON:0000988!2.97e-10!3;UBERON:0001872!4.53e-10!5;UBERON:0001896!1.98e-09!3;UBERON:0005290!1.98e-09!3;UBERON:0010096!1.98e-09!3;UBERON:0000064!2.54e-09!219;UBERON:0002771!3.75e-09!3;UBERON:0000481!8.17e-09!347;UBERON:0000477!1.25e-08!286;UBERON:0004733!1.30e-08!12;UBERON:0002028!1.30e-08!12;UBERON:0007277!1.30e-08!12;UBERON:0000483!1.59e-08!309;UBERON:0001155!2.16e-08!9;UBERON:0000119!2.42e-08!312;UBERON:0004732!6.82e-08!13;UBERON:0000062!1.66e-07!511;UBERON:0002148!2.77e-07!2;UBERON:0009662!2.77e-07!2;UBERON:0001897!5.93e-07!2;UBERON:0000059!8.59e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.05e-29;1!UBERON:0002082;2.05e-29;1!UBERON:0004151;9.43e-11;3!UBERON:0002021;4.79e-07;5!UBERON:0000013;5.86e-07;5!UBERON:0002410;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.78e-29,1;UBERON:0002082,1.78e-29,1;UBERON:0010226,1.78e-29,1;UBERON:0004151,8.99e-11,3;UBERON:0002021,4.79e-07,5;UBERON:0000013,6.77e-07,5;UBERON:0002410,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.600182192168805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.223171457441873,1.47803639470798,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,2.8339315265117,0.319267718114302,0.41023272848151,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.826747186004736,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p11@CHRM2 | |||
}} |
Latest revision as of 13:48, 16 September 2015
Short description: | p11@CHRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CHRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_NM_001006627, NM_001006630, uc003vtf.1, uc003vtg.1_5end |
EntrezGene: | CHRM2 |
HGNC: | 1951 |
UniProt: | A4D1Q0P08172Q6SL56Q86SJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.78e-29 | 1 |
cardiac ventricle | 1.78e-29 | 1 |
future cardiac ventricle | 1.78e-29 | 1 |
cardiac chamber | 8.99e-11 | 3 |
occipital lobe | 4.79e-07 | 5 |
sympathetic nervous system | 6.77e-07 | 5 |
autonomic nervous system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.16e-29 | 1 |
teratoma | 1.33e-15 | 2 |
mesenchymal cell neoplasm | 2.37e-15 | 2 |