FFCP PHASE1:Hg19::chr10:116697946..116698013,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:116697946..116698013,+ to FFCP PHASE1:Hg19::chr10:116697946..116698013,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142940 | |EntrezGene=142940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16060 | |HGNC=16060 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWH5 | |UniProt=Q8WWH5 | ||
|association_with_transcript=0bp_to_ENST00000298746,NM_139169,uc001lcd.2_5end | |||
|cluster_id=chr10:116697946..116698013,+ | |||
|description=CAGE_peak_1_at_TRUB1_5end | |||
|id=chr10:116697946..116698013,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.12e-14!239;DOID:0050687!3.79e-13!143;DOID:162!4.26e-13!235;DOID:305!6.15e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.12e-14,239;DOID:0050687,3.79e-13,143;DOID:162,4.26e-13,235;DOID:305,6.15e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.14e-12!94;UBERON:0001016!4.14e-12!94;UBERON:0000924!5.92e-12!173;UBERON:0006601!5.92e-12!173;UBERON:0004121!1.27e-11!169;UBERON:0000033!3.30e-11!123;UBERON:0005743!3.99e-11!86;UBERON:0001017!1.14e-10!82;UBERON:0000153!1.53e-10!129;UBERON:0007811!1.53e-10!129;UBERON:0002780!5.22e-09!41;UBERON:0001890!5.22e-09!41;UBERON:0006240!5.22e-09!41;UBERON:0000955!1.43e-08!69;UBERON:0006238!1.43e-08!69;UBERON:0001869!2.37e-08!32;UBERON:0001893!3.11e-08!34;UBERON:0003080!3.27e-08!42;UBERON:0002791!1.01e-07!33;UBERON:0002020!1.42e-07!34;UBERON:0003528!1.42e-07!34;UBERON:0001049!4.23e-07!57;UBERON:0005068!4.23e-07!57;UBERON:0006241!4.23e-07!57;UBERON:0007135!4.23e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.01e-07;32!UBERON:0001893;2.32e-07;34!UBERON:0002791;2.86e-07;32!UBERON:0003528;7.00e-07;34!UBERON:0002020;7.00e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.79e-12,89;UBERON:0004121,6.17e-12,171;UBERON:0000924,6.17e-12,171;UBERON:0006601,6.17e-12,171;UBERON:0011216,1.86e-11,223;UBERON:0001017,2.62e-11,81;UBERON:0000955,3.52e-09,68;UBERON:0006238,3.52e-09,68;UBERON:0002780,5.22e-09,41;UBERON:0001890,5.22e-09,41;UBERON:0003080,5.22e-09,41;UBERON:0006240,5.22e-09,41;UBERON:0001869,2.37e-08,32;UBERON:0001893,3.11e-08,34;UBERON:0000073,9.01e-08,53;UBERON:0002616,9.01e-08,53;UBERON:0002791,9.19e-08,32;UBERON:0001049,1.06e-07,56;UBERON:0005068,1.06e-07,56;UBERON:0006241,1.06e-07,56;UBERON:0007135,1.06e-07,56;UBERON:0003528,1.42e-07,34;UBERON:0002020,1.42e-07,34;UBERON:0003056,4.28e-07,61 | |||
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| ||
|short_description=p1@TRUB1 | |||
}} | }} |
Latest revision as of 13:23, 16 September 2015
Short description: | p1@TRUB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRUB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298746, NM_139169, uc001lcd.2_5end |
EntrezGene: | TRUB1 |
HGNC: | 16060 |
UniProt: | Q8WWH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.79e-12 | 89 |
ectoderm-derived structure | 6.17e-12 | 171 |
ectoderm | 6.17e-12 | 171 |
presumptive ectoderm | 6.17e-12 | 171 |
organ system subdivision | 1.86e-11 | 223 |
central nervous system | 2.62e-11 | 81 |
brain | 3.52e-09 | 68 |
future brain | 3.52e-09 | 68 |
regional part of forebrain | 5.22e-09 | 41 |
forebrain | 5.22e-09 | 41 |
anterior neural tube | 5.22e-09 | 41 |
future forebrain | 5.22e-09 | 41 |
cerebral hemisphere | 2.37e-08 | 32 |
telencephalon | 3.11e-08 | 34 |
regional part of nervous system | 9.01e-08 | 53 |
regional part of brain | 9.01e-08 | 53 |
regional part of telencephalon | 9.19e-08 | 32 |
neural tube | 1.06e-07 | 56 |
neural rod | 1.06e-07 | 56 |
future spinal cord | 1.06e-07 | 56 |
neural keel | 1.06e-07 | 56 |
brain grey matter | 1.42e-07 | 34 |
gray matter | 1.42e-07 | 34 |
pre-chordal neural plate | 4.28e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.12e-14 | 239 |
cell type cancer | 3.79e-13 | 143 |
cancer | 4.26e-13 | 235 |
carcinoma | 6.15e-10 | 106 |