FFCP PHASE1:Hg19::chr11:125496218..125496344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1111 | |EntrezGene=1111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1925 | |HGNC=1925 | ||
|TSSclassifier=strong | |||
|UniProt=O14757 | |UniProt=O14757 | ||
|association_with_transcript=0bp_to_ENST00000534070,NM_001274,uc001qcg.3_5end | |association_with_transcript=0bp_to_ENST00000534070,NM_001274,uc001qcg.3_5end | ||
|cluster_id=chr11:125496218..125496344,+ | |||
|description=CAGE_peak_2_at_CHEK1_5end | |description=CAGE_peak_2_at_CHEK1_5end | ||
|id=chr11:125496218..125496344,+ | |id=chr11:125496218..125496344,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.79e-37!180;CL:0000548!1.39e-25!679;CL:0000004!1.39e-25!679;CL:0000255!1.39e-25!679;CL:0000012!8.01e-25!682;CL:0002321!2.74e-23!248;CL:0000220!1.38e-22!246;CL:0000057!1.26e-19!75;CL:0000144!1.07e-16!625;CL:0000680!5.09e-14!57;CL:0000056!5.09e-14!57;CL:0000355!5.09e-14!57;CL:0002371!1.47e-13!591;CL:0000393!3.31e-13!60;CL:0000211!3.31e-13!60;CL:0000066!5.34e-13!254;CL:0000187!8.80e-13!54;CL:0000003!9.20e-13!722;CL:0000222!5.55e-12!119;CL:0000183!9.11e-12!59;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0002620!1.89e-07!23;CL:0000221!3.72e-07!71 | |ontology_enrichment_celltype=CL:0000055!1.79e-37!180;CL:0000548!1.39e-25!679;CL:0000004!1.39e-25!679;CL:0000255!1.39e-25!679;CL:0000012!8.01e-25!682;CL:0002321!2.74e-23!248;CL:0000220!1.38e-22!246;CL:0000057!1.26e-19!75;CL:0000144!1.07e-16!625;CL:0000680!5.09e-14!57;CL:0000056!5.09e-14!57;CL:0000355!5.09e-14!57;CL:0002371!1.47e-13!591;CL:0000393!3.31e-13!60;CL:0000211!3.31e-13!60;CL:0000066!5.34e-13!254;CL:0000187!8.80e-13!54;CL:0000003!9.20e-13!722;CL:0000222!5.55e-12!119;CL:0000183!9.11e-12!59;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0002620!1.89e-07!23;CL:0000221!3.72e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000057;4.10e-09;73!CL:0000187;2.05e-08;55!CL:0002620;7.08e-08;23!CL:0000393;1.19e-07;61!CL:0000211;1.19e-07;61!CL:0000192;6.52e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.35e-22,250;CL:0000057,1.54e-20,76;CL:0000680,4.95e-15,58;CL:0000056,4.95e-15,58;CL:0000355,4.95e-15,58;CL:0000393,3.64e-14,61;CL:0000211,3.64e-14,61;CL:0000187,1.07e-13,55;CL:0000222,7.72e-13,121;CL:0000066,3.12e-10,253;CL:0000192,1.25e-09,43;CL:0000514,1.25e-09,43;CL:0002620,1.20e-07,23;CL:0000221,8.79e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000355;1.70e-08;58!CL:0000514;6.52e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.65e-18!83;UBERON:0002329!6.65e-18!83;UBERON:0003077!6.65e-18!83;UBERON:0003059!6.65e-18!83;UBERON:0007282!6.65e-18!83;UBERON:0009618!6.65e-18!83;UBERON:0007285!6.65e-18!83;UBERON:0000486!3.06e-17!82;UBERON:0002100!1.33e-15!216;UBERON:0003104!5.72e-14!238;UBERON:0009142!5.72e-14!238;UBERON:0005256!7.56e-14!143;UBERON:0004290!1.35e-13!70;UBERON:0001134!2.38e-11!61;UBERON:0002036!2.38e-11!61;UBERON:0003082!2.38e-11!61;UBERON:0003102!1.11e-10!95;UBERON:0002385!1.14e-10!63;UBERON:0001015!1.14e-10!63;UBERON:0000383!1.14e-10!63;UBERON:0000475!1.65e-10!365;UBERON:0000481!5.40e-10!347;UBERON:0000468!1.84e-08!659;UBERON:0000490!2.25e-08!138;UBERON:0002097!9.11e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!6.65e-18!83;UBERON:0002329!6.65e-18!83;UBERON:0003077!6.65e-18!83;UBERON:0003059!6.65e-18!83;UBERON:0007282!6.65e-18!83;UBERON:0009618!6.65e-18!83;UBERON:0007285!6.65e-18!83;UBERON:0000486!3.06e-17!82;UBERON:0002100!1.33e-15!216;UBERON:0003104!5.72e-14!238;UBERON:0009142!5.72e-14!238;UBERON:0005256!7.56e-14!143;UBERON:0004290!1.35e-13!70;UBERON:0001134!2.38e-11!61;UBERON:0002036!2.38e-11!61;UBERON:0003082!2.38e-11!61;UBERON:0003102!1.11e-10!95;UBERON:0002385!1.14e-10!63;UBERON:0001015!1.14e-10!63;UBERON:0000383!1.14e-10!63;UBERON:0000475!1.65e-10!365;UBERON:0000481!5.40e-10!347;UBERON:0000468!1.84e-08!659;UBERON:0000490!2.25e-08!138;UBERON:0002097!9.11e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000075;8.59e-07;16 | |||
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| ||
|short_description=p2@CHEK1 | |short_description=p2@CHEK1 | ||
}} | }} |
Latest revision as of 13:22, 16 September 2015
Short description: | p2@CHEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534070, NM_001274, uc001qcg.3_5end |
EntrezGene: | CHEK1 |
HGNC: | 1925 |
UniProt: | O14757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.35e-22 | 250 |
fibroblast | 1.54e-20 | 76 |
muscle precursor cell | 4.95e-15 | 58 |
myoblast | 4.95e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.95e-15 | 58 |
electrically responsive cell | 3.64e-14 | 61 |
electrically active cell | 3.64e-14 | 61 |
muscle cell | 1.07e-13 | 55 |
mesodermal cell | 7.72e-13 | 121 |
epithelial cell | 3.12e-10 | 253 |
smooth muscle cell | 1.25e-09 | 43 |
smooth muscle myoblast | 1.25e-09 | 43 |
skin fibroblast | 1.20e-07 | 23 |
ectodermal cell | 8.79e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 6.21e-19 | 83 |
somite | 5.64e-15 | 71 |
presomitic mesoderm | 5.64e-15 | 71 |
presumptive segmental plate | 5.64e-15 | 71 |
dermomyotome | 5.64e-15 | 71 |
trunk paraxial mesoderm | 5.64e-15 | 71 |
dense mesenchyme tissue | 1.61e-14 | 73 |
paraxial mesoderm | 2.16e-14 | 72 |
presumptive paraxial mesoderm | 2.16e-14 | 72 |
epithelial vesicle | 3.26e-13 | 78 |
skeletal muscle tissue | 1.54e-12 | 62 |
striated muscle tissue | 1.54e-12 | 62 |
myotome | 1.54e-12 | 62 |
trunk | 2.09e-12 | 199 |
surface structure | 2.25e-12 | 99 |
mesenchyme | 5.72e-12 | 160 |
entire embryonic mesenchyme | 5.72e-12 | 160 |
muscle tissue | 1.90e-11 | 64 |
musculature | 1.90e-11 | 64 |
musculature of body | 1.90e-11 | 64 |
unilaminar epithelium | 2.55e-11 | 148 |
trunk mesenchyme | 3.37e-11 | 122 |
skin of body | 7.25e-07 | 41 |
subdivision of skeletal system | 9.88e-07 | 16 |