FFCP PHASE1:Hg19::chr9:139606983..139607035,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:139606983..139607035,+
|short_description=p1@FAM69B
|description=CAGE_peak_1_at_FAM69B_5end
|association_with_transcript=0bp_to_ENST00000371692,NM_152421,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=138311 | |EntrezGene=138311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28290 | |HGNC=28290 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VUD6 | |UniProt=Q5VUD6 | ||
|association_with_transcript=0bp_to_ENST00000371692,NM_152421,uc004cik.2_5end | |||
|cluster_id=chr9:139606983..139607035,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_FAM69B_5end | |||
|id=chr9:139606983..139607035,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.16e-17!24;CL:0000115!1.30e-16!35;CL:0002078!3.87e-14!44;CL:0000071!9.92e-14!18;CL:0002546!9.92e-14!18;CL:0000213!7.20e-12!57;CL:0000215!7.20e-12!57;CL:1000413!1.33e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.30e-19;24!CL:0000115;5.32e-16;36!CL:0000071;5.13e-15;18!CL:0002078;2.70e-10;45!CL:0000213;2.59e-08;58!CL:0000215;2.59e-08;58!CL:1000413;3.06e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.50e-19,24;CL:0000115,6.35e-19,36;CL:0002078,2.79e-15,45;CL:0000071,5.47e-15,18;CL:0002546,5.47e-15,18;CL:0000213,9.46e-13,58;CL:0000215,9.46e-13,58;CL:1000413,3.15e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.13e-15;18 | |||
|ontology_enrichment_disease=DOID:3095!7.50e-08!22;DOID:2994!7.50e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-08;22!DOID:2994;3.26e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.41e-08,22;DOID:2994,3.41e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000025!2.02e-23!194;UBERON:0000073!1.39e-21!94;UBERON:0001016!1.39e-21!94;UBERON:0005743!9.14e-21!86;UBERON:0001017!2.02e-19!82;UBERON:0004111!5.11e-19!241;UBERON:0002346!7.65e-19!90;UBERON:0003075!1.23e-17!86;UBERON:0007284!1.23e-17!86;UBERON:0001049!8.24e-16!57;UBERON:0005068!8.24e-16!57;UBERON:0006241!8.24e-16!57;UBERON:0007135!8.24e-16!57;UBERON:0000955!2.03e-15!69;UBERON:0006238!2.03e-15!69;UBERON:0000119!2.36e-15!312;UBERON:0000483!3.49e-15!309;UBERON:0007023!6.58e-15!115;UBERON:0002616!3.30e-14!59;UBERON:0000477!7.01e-14!286;UBERON:0001986!9.92e-14!18;UBERON:0004638!9.92e-14!18;UBERON:0004852!9.92e-14!18;UBERON:0003056!2.33e-12!61;UBERON:0002780!9.26e-12!41;UBERON:0001890!9.26e-12!41;UBERON:0006240!9.26e-12!41;UBERON:0003080!1.23e-11!42;UBERON:0001869!3.02e-11!32;UBERON:0000487!4.99e-11!22;UBERON:0002020!5.09e-11!34;UBERON:0003528!5.09e-11!34;UBERON:0001893!5.16e-11!34;UBERON:0002791!1.55e-10!33;UBERON:0000924!1.69e-10!173;UBERON:0006601!1.69e-10!173;UBERON:0006914!9.96e-10!25;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0004121!1.24e-09!169;UBERON:0002619!4.17e-09!22;UBERON:0000033!4.38e-09!123;UBERON:0001950!7.65e-09!20;UBERON:0003914!1.06e-08!118;UBERON:0000153!1.08e-08!129;UBERON:0007811!1.08e-08!129;UBERON:0003915!1.33e-07!9;UBERON:0004700!1.33e-07!9;UBERON:0001917!1.33e-07!9;UBERON:0001009!2.80e-07!113;UBERON:0003103!4.55e-07!69;UBERON:0002049!6.34e-07!79;UBERON:0007798!6.34e-07!79;UBERON:0004535!9.97e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.13e-15;18!UBERON:0001986;5.13e-15;18!UBERON:0004852;5.13e-15;18!UBERON:0000487;2.00e-12;22!UBERON:0001869;4.25e-11;32!UBERON:0006914;8.85e-11;25!UBERON:0003528;2.13e-10;34!UBERON:0002020;2.13e-10;34!UBERON:0000956;2.26e-10;25!UBERON:0000203;2.26e-10;25!UBERON:0001893;2.92e-10;34!UBERON:0002791;4.48e-10;32!UBERON:0002619;9.85e-10;22!UBERON:0000490;1.33e-09;33!UBERON:0001950;1.76e-09;20!UBERON:0000073;1.97e-09;53!UBERON:0002616;1.97e-09;53!UBERON:0002780;5.97e-09;41!UBERON:0001890;5.97e-09;41!UBERON:0000922;1.11e-08;49!UBERON:0003915;3.06e-08;9!UBERON:0004700;3.06e-08;9!UBERON:0001917;3.06e-08;9!UBERON:0001017;5.65e-08;75!UBERON:0000955;6.19e-08;68!UBERON:0001016;7.76e-08;83 | |||
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| ||
|short_description=p1@FAM69B | |||
}} | }} |
Latest revision as of 12:58, 16 September 2015
Short description: | p1@FAM69B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM69B_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000371692, NM_152421, uc004cik.2_5end |
EntrezGene: | FAM69B |
HGNC: | 28290 |
UniProt: | Q5VUD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.50e-19 | 24 |
endothelial cell | 6.35e-19 | 36 |
meso-epithelial cell | 2.79e-15 | 45 |
blood vessel endothelial cell | 5.47e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.47e-15 | 18 |
lining cell | 9.46e-13 | 58 |
barrier cell | 9.46e-13 | 58 |
endothelial cell of artery | 3.15e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.41e-08 | 22 |
germ cell cancer | 3.41e-08 | 22 |